RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 LINC00116Q8NCU8 138 aa16.79■□□□□ 0.28
VEGFA-223ENST00000523125 SLC4A9Q96Q91 983 aa16.78■□□□□ 0.28
VEGFA-223ENST00000523125 GOLGB1Q14789 3259 aaKnown RBP16.78■□□□□ 0.28
VEGFA-223ENST00000523125 MYH14Q7Z406 1995 aaKnown RBP16.78■□□□□ 0.28
VEGFA-223ENST00000523125 UTRNP46939 3433 aa16.77■□□□□ 0.28
VEGFA-223ENST00000523125 MSH5O43196 834 aa16.77■□□□□ 0.28
VEGFA-223ENST00000523125 DIAPH1O60610 1272 aaKnown RBP16.77■□□□□ 0.28
VEGFA-223ENST00000523125 HMOX1P09601 288 aa16.77■□□□□ 0.28
VEGFA-223ENST00000523125 CNGB1Q14028 1251 aaPredicted RBP16.77■□□□□ 0.28
VEGFA-223ENST00000523125 SMIM5Q71RC9 77 aa16.77■□□□□ 0.28
VEGFA-223ENST00000523125 ADAMTS7Q9UKP4 1686 aa16.77■□□□□ 0.28
VEGFA-223ENST00000523125 CHD4Q14839 1912 aa16.76■□□□□ 0.27
VEGFA-223ENST00000523125 POLD1P28340 1107 aa16.76■□□□□ 0.27
VEGFA-223ENST00000523125 ATP6V1AP38606 617 aa16.76■□□□□ 0.27
VEGFA-223ENST00000523125 CABP4P57796 275 aa16.76■□□□□ 0.27
VEGFA-223ENST00000523125 C1orf141Q5JVX7 400 aa16.76■□□□□ 0.27
VEGFA-223ENST00000523125 FLAD1Q8NFF5 587 aa16.76■□□□□ 0.27
VEGFA-223ENST00000523125 AK7Q96M32 723 aa16.76■□□□□ 0.27
VEGFA-223ENST00000523125 MSL1Q68DK7 614 aa16.75■□□□□ 0.27
VEGFA-223ENST00000523125 NFATC2IPQ8NCF5 419 aa16.75■□□□□ 0.27
VEGFA-223ENST00000523125 CICQ96RK0 1608 aaPredicted RBP16.74■□□□□ 0.27
VEGFA-223ENST00000523125 TJP1Q07157 1748 aa16.74■□□□□ 0.27
VEGFA-223ENST00000523125 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.74■□□□□ 0.27
VEGFA-223ENST00000523125 DCAF8L1A6NGE4 600 aa16.74■□□□□ 0.27
VEGFA-223ENST00000523125 AKAP4Q5JQC9 854 aa16.74■□□□□ 0.27
VEGFA-223ENST00000523125 SSFA2P28290 1259 aa16.73■□□□□ 0.27
VEGFA-223ENST00000523125 PHF14O94880 888 aa16.72■□□□□ 0.27
VEGFA-223ENST00000523125 MTHFSDQ2M296 383 aaKnown RBP16.72■□□□□ 0.27
VEGFA-223ENST00000523125 RBM42Q9BTD8 480 aaKnown RBP16.72■□□□□ 0.27
VEGFA-223ENST00000523125 LGR6Q9HBX8 967 aa16.72■□□□□ 0.27
VEGFA-223ENST00000523125 MRC1P22897 1456 aa16.72■□□□□ 0.27
VEGFA-223ENST00000523125 GNPATO15228 680 aa16.71■□□□□ 0.27
VEGFA-223ENST00000523125 YY1P25490 414 aa16.71■□□□□ 0.27
VEGFA-223ENST00000523125 NLGN2Q8NFZ4 835 aa16.71■□□□□ 0.27
VEGFA-223ENST00000523125 C4AP0C0L4 1744 aa16.7■□□□□ 0.26
VEGFA-223ENST00000523125 KLHL34Q8N239 644 aa16.7■□□□□ 0.26
VEGFA-223ENST00000523125 SIPA1L3O60292 1781 aaPredicted RBP16.69■□□□□ 0.26
VEGFA-223ENST00000523125 RNMTO43148 476 aaKnown RBP16.69■□□□□ 0.26
VEGFA-223ENST00000523125 PTCD1O75127 700 aaKnown RBP16.69■□□□□ 0.26
VEGFA-223ENST00000523125 RC3H1Q5TC82 1133 aaKnown RBP16.69■□□□□ 0.26
VEGFA-223ENST00000523125 SLC52A2Q9HAB3 445 aa16.69■□□□□ 0.26
VEGFA-223ENST00000523125 UBR2Q8IWV8 1755 aa16.69■□□□□ 0.26
VEGFA-223ENST00000523125 U2SURPO15042 1029 aaKnown RBP16.68■□□□□ 0.26
VEGFA-223ENST00000523125 PPP2R1AP30153 589 aa16.68■□□□□ 0.26
VEGFA-223ENST00000523125 CNTNAP4Q9C0A0 1308 aa16.68■□□□□ 0.26
VEGFA-223ENST00000523125 RTCBQ9Y3I0 505 aaKnown RBP16.66■□□□□ 0.26
VEGFA-223ENST00000523125 KIF13BQ9NQT8 1826 aa16.66■□□□□ 0.26
VEGFA-223ENST00000523125 KCPQ6ZWJ8 1503 aa16.65■□□□□ 0.26
VEGFA-223ENST00000523125 RPS6KA4O75676 772 aa16.65■□□□□ 0.26
VEGFA-223ENST00000523125 CD2APQ9Y5K6 639 aa16.65■□□□□ 0.26
VEGFA-223ENST00000523125 CRKLP46109 303 aaKnown RBP16.64■□□□□ 0.25
VEGFA-223ENST00000523125 SLC39A6Q13433 755 aa16.64■□□□□ 0.25
VEGFA-223ENST00000523125 GPR162Q16538 588 aa16.64■□□□□ 0.25
VEGFA-223ENST00000523125 TRAPPC3LQ5T215 181 aa16.64■□□□□ 0.25
VEGFA-223ENST00000523125 ARHGEF1Q92888 912 aaKnown RBP16.64■□□□□ 0.25
VEGFA-223ENST00000523125 CFAP53Q96M91 514 aa16.64■□□□□ 0.25
VEGFA-223ENST00000523125 RSPH6AQ9H0K4 717 aa16.64■□□□□ 0.25
VEGFA-223ENST00000523125 KIAA1551Q9HCM1 1747 aa16.63■□□□□ 0.25
VEGFA-223ENST00000523125 ADRA2BP18089 450 aa16.63■□□□□ 0.25
VEGFA-223ENST00000523125 PHACTR3Q96KR7 559 aa16.63■□□□□ 0.25
VEGFA-223ENST00000523125 YBX3P16989 372 aaKnown RBP eCLIP16.62■□□□□ 0.25
VEGFA-223ENST00000523125 INTS5Q6P9B9 1019 aaKnown RBP16.62■□□□□ 0.25
VEGFA-223ENST00000523125 IL17REQ8NFR9 667 aa16.62■□□□□ 0.25
VEGFA-223ENST00000523125 GNAT3A8MTJ3 354 aa16.61■□□□□ 0.25
VEGFA-223ENST00000523125 PRKAR2BP31323 418 aa16.61■□□□□ 0.25
VEGFA-223ENST00000523125 DNAJC10Q8IXB1 793 aa16.61■□□□□ 0.25
VEGFA-223ENST00000523125 GAS2L2Q8NHY3 880 aa16.61■□□□□ 0.25
VEGFA-223ENST00000523125 DLG5Q8TDM6 1919 aa16.6■□□□□ 0.25
VEGFA-223ENST00000523125 N4BP2Q86UW6 1770 aaPredicted RBP16.6■□□□□ 0.25
VEGFA-223ENST00000523125 MMP10P09238 476 aa16.6■□□□□ 0.25
VEGFA-223ENST00000523125 GYS1P13807 737 aa16.6■□□□□ 0.25
VEGFA-223ENST00000523125 PELP1Q8IZL8 1130 aaKnown RBP16.6■□□□□ 0.25
VEGFA-223ENST00000523125 NUDCQ9Y266 331 aa16.6■□□□□ 0.25
VEGFA-223ENST00000523125 CYP19A1P11511 503 aaPredicted RBP16.59■□□□□ 0.25
VEGFA-223ENST00000523125 RFC4P35249 363 aa16.59■□□□□ 0.25
VEGFA-223ENST00000523125 NLGN1Q8N2Q7 840 aa16.59■□□□□ 0.25
VEGFA-223ENST00000523125 CEMIPQ8WUJ3 1361 aa16.59■□□□□ 0.25
VEGFA-223ENST00000523125 U2AF1L5P0DN76 240 aaPredicted RBP16.58■□□□□ 0.24
VEGFA-223ENST00000523125 U2AF1Q01081 240 aaKnown RBP eCLIP16.58■□□□□ 0.24
VEGFA-223ENST00000523125 CCDC87Q9NVE4 849 aa16.58■□□□□ 0.24
VEGFA-223ENST00000523125 BRCA1P38398 1863 aaKnown RBP16.57■□□□□ 0.24
VEGFA-223ENST00000523125 FCHSD2O94868 740 aa16.57■□□□□ 0.24
VEGFA-223ENST00000523125 VSIG10Q8N0Z9 540 aa16.57■□□□□ 0.24
VEGFA-223ENST00000523125 SRP68Q9UHB9 627 aaKnown RBP16.57■□□□□ 0.24
VEGFA-223ENST00000523125 SOS1Q07889 1333 aaPredicted RBP16.56■□□□□ 0.24
VEGFA-223ENST00000523125 USP42Q9H9J4 1324 aaKnown RBP16.56■□□□□ 0.24
VEGFA-223ENST00000523125 ZNF784Q8NCA9 323 aaPredicted RBP16.56■□□□□ 0.24
VEGFA-223ENST00000523125 AFDNP55196 1824 aaKnown RBP16.55■□□□□ 0.24
VEGFA-223ENST00000523125 TEFQ10587 303 aa16.55■□□□□ 0.24
VEGFA-223ENST00000523125 GRIN3BO60391 1043 aa16.54■□□□□ 0.24
VEGFA-223ENST00000523125 FKBP8Q14318 412 aa16.54■□□□□ 0.24
VEGFA-223ENST00000523125 ZNF790Q6PG37 636 aa16.54■□□□□ 0.24
VEGFA-223ENST00000523125 ZNF496Q96IT1 587 aaPredicted RBP16.54■□□□□ 0.24
VEGFA-223ENST00000523125 PXDNLA1KZ92 1463 aa16.54■□□□□ 0.24
VEGFA-223ENST00000523125 C10orf71Q711Q0 1435 aa16.53■□□□□ 0.24
VEGFA-223ENST00000523125 TTC5Q8N0Z6 440 aa16.53■□□□□ 0.24
VEGFA-223ENST00000523125 ZBTB1Q9Y2K1 713 aa16.53■□□□□ 0.24
VEGFA-223ENST00000523125 HEG1Q9ULI3 1381 aa16.52■□□□□ 0.24
VEGFA-223ENST00000523125 KCNQ3O43525 872 aa16.52■□□□□ 0.24
VEGFA-223ENST00000523125 COL15A1P39059 1388 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms