RNA–Protein interactions for RNA: ENST00000521590.5

SDC2-206, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-206ENST00000521590 USP19O94966 1318 aa7.82□□□□□ -1.16
SDC2-206ENST00000521590 RPGRIP1LQ68CZ1 1315 aa7.82□□□□□ -1.16
SDC2-206ENST00000521590 FOXN1O15353 648 aa7.82□□□□□ -1.16
SDC2-206ENST00000521590 MFRPQ9BY79 579 aa7.82□□□□□ -1.16
SDC2-206ENST00000521590 CPDO75976 1380 aa7.82□□□□□ -1.16
SDC2-206ENST00000521590 COL18A1P39060 1754 aa7.82□□□□□ -1.16
SDC2-206ENST00000521590 RGPD5Q99666 1765 aa7.82□□□□□ -1.16
SDC2-206ENST00000521590 PKD1L3Q7Z443 1732 aa7.81□□□□□ -1.16
SDC2-206ENST00000521590 YTHDC2Q9H6S0 1430 aaKnown RBP7.81□□□□□ -1.16
SDC2-206ENST00000521590 LY75O60449 1722 aa7.81□□□□□ -1.16
SDC2-206ENST00000521590 ADGRF5Q8IZF2 1346 aa7.8□□□□□ -1.16
SDC2-206ENST00000521590 PRR36Q9H6K5 1346 aa7.8□□□□□ -1.16
SDC2-206ENST00000521590 PIK3C2AO00443 1686 aa7.8□□□□□ -1.16
SDC2-206ENST00000521590 QRICH2Q9H0J4 1663 aa7.8□□□□□ -1.16
SDC2-206ENST00000521590 TNRC6CQ9HCJ0 1690 aaKnown RBP7.8□□□□□ -1.16
SDC2-206ENST00000521590 POTEEQ6S8J3 1075 aa7.8□□□□□ -1.16
SDC2-206ENST00000521590 TRPM1Q7Z4N2 1603 aa7.8□□□□□ -1.16
SDC2-206ENST00000521590 BRD4O60885 1362 aaPredicted RBP7.8□□□□□ -1.16
SDC2-206ENST00000521590 PDE4DIPQ5VU43 2346 aa7.8□□□□□ -1.16
SDC2-206ENST00000521590 KIAA1551Q9HCM1 1747 aa7.8□□□□□ -1.16
SDC2-206ENST00000521590 VIRMAQ69YN4 1812 aaKnown RBP7.8□□□□□ -1.16
SDC2-206ENST00000521590 C10orf71Q711Q0 1435 aa7.79□□□□□ -1.16
SDC2-206ENST00000521590 C2orf72A6NCS6 295 aa7.79□□□□□ -1.16
SDC2-206ENST00000521590 NUDT7P0C024 238 aa7.79□□□□□ -1.16
SDC2-206ENST00000521590 LSM11P83369 360 aaKnown RBP eCLIP7.79□□□□□ -1.16
SDC2-206ENST00000521590 NUTM2GQ5VZR2 741 aa7.79□□□□□ -1.16
SDC2-206ENST00000521590 STK24Q9Y6E0 443 aa7.79□□□□□ -1.16
SDC2-206ENST00000521590 ANKRD30BQ9BXX2 1392 aa7.79□□□□□ -1.16
SDC2-206ENST00000521590 IGSF1Q8N6C5 1336 aa7.78□□□□□ -1.16
SDC2-206ENST00000521590 C16orf71Q8IYS4 520 aaPredicted RBP7.78□□□□□ -1.16
SDC2-206ENST00000521590 TFCP2L1Q9NZI6 479 aa7.78□□□□□ -1.16
SDC2-206ENST00000521590 PXDNLA1KZ92 1463 aa7.78□□□□□ -1.16
SDC2-206ENST00000521590 N4BP2Q86UW6 1770 aaPredicted RBP7.78□□□□□ -1.16
SDC2-206ENST00000521590 SBF1O95248 1867 aa7.78□□□□□ -1.16
SDC2-206ENST00000521590 ITSN1Q15811 1721 aa7.78□□□□□ -1.16
SDC2-206ENST00000521590 COL23A1Q86Y22 540 aaPredicted RBP7.77□□□□□ -1.17
SDC2-206ENST00000521590 ACSBG1Q96GR2 724 aa7.77□□□□□ -1.17
SDC2-206ENST00000521590 KIF13BQ9NQT8 1826 aa7.77□□□□□ -1.17
SDC2-206ENST00000521590 KCPQ6ZWJ8 1503 aa7.77□□□□□ -1.17
SDC2-206ENST00000521590 USP6P35125 1406 aa7.77□□□□□ -1.17
SDC2-206ENST00000521590 BRCA1P38398 1863 aaKnown RBP7.77□□□□□ -1.17
SDC2-206ENST00000521590 USP54Q70EL1 1684 aa7.76□□□□□ -1.17
SDC2-206ENST00000521590 KCNQ4P56696 695 aa7.76□□□□□ -1.17
SDC2-206ENST00000521590 SAFB2Q14151 953 aaKnown RBP eCLIP7.76□□□□□ -1.17
SDC2-206ENST00000521590 MSL1Q68DK7 614 aa7.76□□□□□ -1.17
SDC2-206ENST00000521590 SMC1BQ8NDV3 1235 aa7.76□□□□□ -1.17
SDC2-206ENST00000521590 NGDNQ8NEJ9 315 aaKnown RBP7.76□□□□□ -1.17
SDC2-206ENST00000521590 HIRIP3Q9BW71 556 aaPredicted RBP7.76□□□□□ -1.17
SDC2-206ENST00000521590 CDCA7Q9BWT1 371 aaPredicted RBP7.76□□□□□ -1.17
SDC2-206ENST00000521590 LHX6Q9UPM6 363 aa7.76□□□□□ -1.17
SDC2-206ENST00000521590 AXIN2Q9Y2T1 843 aa7.76□□□□□ -1.17
SDC2-206ENST00000521590 CCDC85CA6NKD9 419 aa7.75□□□□□ -1.17
SDC2-206ENST00000521590 CTCFP49711 727 aaPredicted RBP7.75□□□□□ -1.17
SDC2-206ENST00000521590 SLC27A3Q5K4L6 730 aa7.75□□□□□ -1.17
SDC2-206ENST00000521590 PRAM1Q96QH2 718 aa7.75□□□□□ -1.17
SDC2-206ENST00000521590 RRAGCQ9HB90 399 aa7.75□□□□□ -1.17
SDC2-206ENST00000521590 ARFGEF1Q9Y6D6 1849 aa7.74□□□□□ -1.17
SDC2-206ENST00000521590 EXOC5O00471 708 aa7.74□□□□□ -1.17
SDC2-206ENST00000521590 STK25O00506 426 aa7.74□□□□□ -1.17
SDC2-206ENST00000521590 GCP02774 474 aa7.74□□□□□ -1.17
SDC2-206ENST00000521590 LBX1P52954 281 aa7.74□□□□□ -1.17
SDC2-206ENST00000521590 TOM1L2Q6ZVM7 507 aa7.74□□□□□ -1.17
SDC2-206ENST00000521590 PCDHGA4Q9Y5G9 962 aa7.74□□□□□ -1.17
SDC2-206ENST00000521590 PIK3C2GO75747 1445 aa7.74□□□□□ -1.17
SDC2-206ENST00000521590 TAF1LQ8IZX4 1826 aa7.73□□□□□ -1.17
SDC2-206ENST00000521590 ROCK1Q13464 1354 aa7.73□□□□□ -1.17
SDC2-206ENST00000521590 WDR17Q8IZU2 1322 aa7.73□□□□□ -1.17
SDC2-206ENST00000521590 ABCC6O95255 1503 aa7.73□□□□□ -1.17
SDC2-206ENST00000521590 C5P01031 1676 aa7.71□□□□□ -1.18
SDC2-206ENST00000521590 PBX2P40425 430 aa7.71□□□□□ -1.18
SDC2-206ENST00000521590 FAM50AQ14320 339 aaKnown RBP7.71□□□□□ -1.18
SDC2-206ENST00000521590 MKRN1Q9UHC7 482 aaKnown RBP7.71□□□□□ -1.18
SDC2-206ENST00000521590 KDM2BQ8NHM5 1336 aa7.71□□□□□ -1.18
SDC2-206ENST00000521590 PLEKHG2Q9H7P9 1386 aa7.71□□□□□ -1.18
SDC2-206ENST00000521590 TOGARAM1Q9Y4F4 1720 aa7.7□□□□□ -1.18
SDC2-206ENST00000521590 PPP1R37O75864 691 aa7.7□□□□□ -1.18
SDC2-206ENST00000521590 HSPA8P11142 646 aaKnown RBP7.7□□□□□ -1.18
SDC2-206ENST00000521590 C9orf131Q5VYM1 1079 aa7.7□□□□□ -1.18
SDC2-206ENST00000521590 ARHGAP27Q6ZUM4 889 aa7.7□□□□□ -1.18
SDC2-206ENST00000521590 ABTB2Q8N961 1025 aa7.7□□□□□ -1.18
SDC2-206ENST00000521590 CARD10Q9BWT7 1032 aa7.7□□□□□ -1.18
SDC2-206ENST00000521590 WBP1LQ9NX94 342 aa7.7□□□□□ -1.18
SDC2-206ENST00000521590 TAOK2Q9UL54 1235 aa7.7□□□□□ -1.18
SDC2-206ENST00000521590 CCDC88AQ3V6T2 1871 aa7.7□□□□□ -1.18
SDC2-206ENST00000521590 POLR3AO14802 1390 aaPredicted RBP7.7□□□□□ -1.18
SDC2-206ENST00000521590 UBR3Q6ZT12 1888 aa7.69□□□□□ -1.18
SDC2-206ENST00000521590 WASLO00401 505 aaPredicted RBP7.69□□□□□ -1.18
SDC2-206ENST00000521590 C14orf93Q9H972 538 aaKnown RBP7.69□□□□□ -1.18
SDC2-206ENST00000521590 EIF3AQ14152 1382 aaKnown RBP7.69□□□□□ -1.18
SDC2-206ENST00000521590 RGL2O15211 777 aa7.68□□□□□ -1.18
SDC2-206ENST00000521590 ECM2O94769 699 aaPredicted RBP7.68□□□□□ -1.18
SDC2-206ENST00000521590 CNTNAP1P78357 1384 aa7.68□□□□□ -1.18
SDC2-206ENST00000521590 SPATA31E1Q6ZUB1 1445 aa7.68□□□□□ -1.18
SDC2-206ENST00000521590 SLIT3O75094 1523 aa7.68□□□□□ -1.18
SDC2-206ENST00000521590 DOT1LQ8TEK3 1739 aa7.67□□□□□ -1.18
SDC2-206ENST00000521590 NLRP13Q86W25 1043 aa7.67□□□□□ -1.18
SDC2-206ENST00000521590 AIDAQ96BJ3 306 aa7.67□□□□□ -1.18
SDC2-206ENST00000521590 POGKQ9P215 609 aa7.67□□□□□ -1.18
SDC2-206ENST00000521590 BCS1LQ9Y276 419 aa7.67□□□□□ -1.18
SDC2-206ENST00000521590 ACEP12821 1306 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms