RNA–Protein interactions for RNA: ENST00000521569.1

SPARC-204, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 602 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-204ENST00000521569 MAP2P11137 1827 aaKnown RBP11.78□□□□□ -0.52
SPARC-204ENST00000521569 GNPATO15228 680 aa11.77□□□□□ -0.53
SPARC-204ENST00000521569 TRIM26Q12899 539 aaPredicted RBP11.77□□□□□ -0.53
SPARC-204ENST00000521569 AMOTQ4VCS5 1084 aa11.77□□□□□ -0.53
SPARC-204ENST00000521569 TRAPPC3LQ5T215 181 aa11.77□□□□□ -0.53
SPARC-204ENST00000521569 CICQ96RK0 1608 aaPredicted RBP11.77□□□□□ -0.53
SPARC-204ENST00000521569 CNTNAP4Q9C0A0 1308 aa11.77□□□□□ -0.53
SPARC-204ENST00000521569 TOGARAM1Q9Y4F4 1720 aa11.77□□□□□ -0.53
SPARC-204ENST00000521569 TAF1LQ8IZX4 1826 aa11.76□□□□□ -0.53
SPARC-204ENST00000521569 PPM1GO15355 546 aaPredicted RBP11.76□□□□□ -0.53
SPARC-204ENST00000521569 MMP10P09238 476 aa11.76□□□□□ -0.53
SPARC-204ENST00000521569 SLC4A9Q96Q91 983 aa11.76□□□□□ -0.53
SPARC-204ENST00000521569 RTCBQ9Y3I0 505 aaKnown RBP11.76□□□□□ -0.53
SPARC-204ENST00000521569 ZNF831Q5JPB2 1677 aa11.75□□□□□ -0.53
SPARC-204ENST00000521569 UBR3Q6ZT12 1888 aa11.75□□□□□ -0.53
SPARC-204ENST00000521569 KIF3CO14782 793 aa11.75□□□□□ -0.53
SPARC-204ENST00000521569 RPS6KA4O75676 772 aa11.75□□□□□ -0.53
SPARC-204ENST00000521569 PHF14O94880 888 aa11.75□□□□□ -0.53
SPARC-204ENST00000521569 PLEKHO1Q53GL0 409 aaPredicted RBP11.75□□□□□ -0.53
SPARC-204ENST00000521569 ARHGEF1Q92888 912 aaKnown RBP11.74□□□□□ -0.53
SPARC-204ENST00000521569 C10orf71Q711Q0 1435 aa11.74□□□□□ -0.53
SPARC-204ENST00000521569 KIF20BQ96Q89 1820 aa11.74□□□□□ -0.53
SPARC-204ENST00000521569 PXDNLA1KZ92 1463 aa11.73□□□□□ -0.53
SPARC-204ENST00000521569 GYS1P13807 737 aa11.73□□□□□ -0.53
SPARC-204ENST00000521569 SMIM5Q71RC9 77 aa11.73□□□□□ -0.53
SPARC-204ENST00000521569 ITGB4P16144 1822 aa11.72□□□□□ -0.53
SPARC-204ENST00000521569 TOMM70O94826 608 aa11.71□□□□□ -0.53
SPARC-204ENST00000521569 KCNA3P22001 575 aa11.71□□□□□ -0.53
SPARC-204ENST00000521569 RFC4P35249 363 aa11.71□□□□□ -0.53
SPARC-204ENST00000521569 APLP1P51693 650 aa11.71□□□□□ -0.53
SPARC-204ENST00000521569 CCDC87Q9NVE4 849 aa11.71□□□□□ -0.53
SPARC-204ENST00000521569 KDM6AO15550 1401 aaPredicted RBP11.7□□□□□ -0.54
SPARC-204ENST00000521569 A0A0G2JLW4 131 aa11.69□□□□□ -0.54
SPARC-204ENST00000521569 MTHFSP49914 203 aa11.69□□□□□ -0.54
SPARC-204ENST00000521569 CABP4P57796 275 aa11.69□□□□□ -0.54
SPARC-204ENST00000521569 ZNF530Q6P9A1 599 aaPredicted RBP11.69□□□□□ -0.54
SPARC-204ENST00000521569 DNAJC5GQ8N7S2 189 aa11.69□□□□□ -0.54
SPARC-204ENST00000521569 PANK3Q9H999 370 aa11.69□□□□□ -0.54
SPARC-204ENST00000521569 PARP3Q9Y6F1 533 aa11.69□□□□□ -0.54
SPARC-204ENST00000521569 KIF13BQ9NQT8 1826 aa11.69□□□□□ -0.54
SPARC-204ENST00000521569 DPEP1P16444 411 aa11.68□□□□□ -0.54
SPARC-204ENST00000521569 TM4SF1P30408 202 aa11.68□□□□□ -0.54
SPARC-204ENST00000521569 IL13P35225 146 aa11.68□□□□□ -0.54
SPARC-204ENST00000521569 CRKLP46109 303 aaKnown RBP11.68□□□□□ -0.54
SPARC-204ENST00000521569 EIF4G2P78344 907 aaKnown RBP eCLIP11.68□□□□□ -0.54
SPARC-204ENST00000521569 RBM46Q8TBY0 533 aaKnown RBP11.68□□□□□ -0.54
SPARC-204ENST00000521569 RBM42Q9BTD8 480 aaKnown RBP11.68□□□□□ -0.54
SPARC-204ENST00000521569 USP42Q9H9J4 1324 aaKnown RBP11.67□□□□□ -0.54
SPARC-204ENST00000521569 C1orf141Q5JVX7 400 aa11.67□□□□□ -0.54
SPARC-204ENST00000521569 NFATC2IPQ8NCF5 419 aa11.67□□□□□ -0.54
SPARC-204ENST00000521569 PIM2Q9P1W9 311 aa11.67□□□□□ -0.54
SPARC-204ENST00000521569 BCS1LQ9Y276 419 aa11.67□□□□□ -0.54
SPARC-204ENST00000521569 ZC3H4Q9UPT8 1303 aaKnown RBP11.66□□□□□ -0.54
SPARC-204ENST00000521569 TNNT2P45379 298 aaPredicted RBP11.66□□□□□ -0.54
SPARC-204ENST00000521569 AKAP4Q5JQC9 854 aa11.66□□□□□ -0.54
SPARC-204ENST00000521569 INTS5Q6P9B9 1019 aaKnown RBP11.66□□□□□ -0.54
SPARC-204ENST00000521569 VSIG10Q8N0Z9 540 aa11.66□□□□□ -0.54
SPARC-204ENST00000521569 ZNF526Q8TF50 670 aaPredicted RBP11.66□□□□□ -0.54
SPARC-204ENST00000521569 FCHSD2O94868 740 aa11.65□□□□□ -0.54
SPARC-204ENST00000521569 FSTL1Q12841 308 aa11.65□□□□□ -0.54
SPARC-204ENST00000521569 FKBP8Q14318 412 aa11.65□□□□□ -0.54
SPARC-204ENST00000521569 DALRD3Q5D0E6 543 aaKnown RBP11.65□□□□□ -0.54
SPARC-204ENST00000521569 AMER1Q5JTC6 1135 aaPredicted RBP11.65□□□□□ -0.54
SPARC-204ENST00000521569 ARHGAP27Q6ZUM4 889 aa11.65□□□□□ -0.54
SPARC-204ENST00000521569 MORC1Q86VD1 984 aa11.65□□□□□ -0.54
SPARC-204ENST00000521569 AEBP1Q8IUX7 1158 aa11.65□□□□□ -0.54
SPARC-204ENST00000521569 KIAA1551Q9HCM1 1747 aa11.65□□□□□ -0.54
SPARC-204ENST00000521569 C4AP0C0L4 1744 aa11.64□□□□□ -0.55
SPARC-204ENST00000521569 POLRMTO00411 1230 aaKnown RBP11.64□□□□□ -0.55
SPARC-204ENST00000521569 PTCD1O75127 700 aaKnown RBP11.64□□□□□ -0.55
SPARC-204ENST00000521569 HSPA5P11021 654 aaKnown RBP11.64□□□□□ -0.55
SPARC-204ENST00000521569 DDR1Q08345 913 aa11.64□□□□□ -0.55
SPARC-204ENST00000521569 C9orf131Q5VYM1 1079 aa11.64□□□□□ -0.55
SPARC-204ENST00000521569 SULT6B1Q6IMI4 303 aa11.64□□□□□ -0.55
SPARC-204ENST00000521569 SLC52A2Q9HAB3 445 aa11.64□□□□□ -0.55
SPARC-204ENST00000521569 SOS1Q07889 1333 aaPredicted RBP11.63□□□□□ -0.55
SPARC-204ENST00000521569 JMYQ8N9B5 988 aa11.63□□□□□ -0.55
SPARC-204ENST00000521569 KNSTRNQ9Y448 316 aa11.63□□□□□ -0.55
SPARC-204ENST00000521569 COL5A3P25940 1745 aaPredicted RBP11.63□□□□□ -0.55
SPARC-204ENST00000521569 CYP19A1P11511 503 aaPredicted RBP11.62□□□□□ -0.55
SPARC-204ENST00000521569 NMRK2Q9NPI5 230 aa11.62□□□□□ -0.55
SPARC-204ENST00000521569 SRP68Q9UHB9 627 aaKnown RBP11.62□□□□□ -0.55
SPARC-204ENST00000521569 NARFQ9UHQ1 456 aa11.62□□□□□ -0.55
SPARC-204ENST00000521569 WWC3Q9ULE0 1092 aa11.62□□□□□ -0.55
SPARC-204ENST00000521569 MRC1P22897 1456 aa11.62□□□□□ -0.55
SPARC-204ENST00000521569 KDM2BQ8NHM5 1336 aa11.61□□□□□ -0.55
SPARC-204ENST00000521569 ZPR1O75312 459 aa11.61□□□□□ -0.55
SPARC-204ENST00000521569 PER1O15534 1290 aaPredicted RBP11.6□□□□□ -0.55
SPARC-204ENST00000521569 RNMTO43148 476 aaKnown RBP11.6□□□□□ -0.55
SPARC-204ENST00000521569 PDZRN3Q9UPQ7 1066 aa11.6□□□□□ -0.55
SPARC-204ENST00000521569 MYH14Q7Z406 1995 aaKnown RBP11.59□□□□□ -0.55
SPARC-204ENST00000521569 NFIXQ14938 502 aa11.59□□□□□ -0.55
SPARC-204ENST00000521569 DNAJC10Q8IXB1 793 aa11.59□□□□□ -0.55
SPARC-204ENST00000521569 LGR6Q9HBX8 967 aa11.59□□□□□ -0.55
SPARC-204ENST00000521569 ADAMTS7Q9UKP4 1686 aa11.59□□□□□ -0.55
SPARC-204ENST00000521569 NPC1L1Q9UHC9 1359 aa11.58□□□□□ -0.56
SPARC-204ENST00000521569 USPL1Q5W0Q7 1092 aa11.58□□□□□ -0.56
SPARC-204ENST00000521569 KLRG1Q96E93 195 aa11.58□□□□□ -0.56
SPARC-204ENST00000521569 POLR3GLQ9BT43 218 aa11.58□□□□□ -0.56
SPARC-204ENST00000521569 BCL2L12Q9HB09 334 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms