RNA–Protein interactions for RNA: ENST00000520999.6

TSPAN18-209, Transcript of tetraspanin 18, humanhuman

TSL 5

Gene TSPAN18, Length 871 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN18-209ENST00000520999 BRPF1P55201 1214 aaPredicted RBP23.63■■□□□ 1.37
TSPAN18-209ENST00000520999 VAMP4O75379 141 aa23.62■■□□□ 1.37
TSPAN18-209ENST00000520999 NFATC2IPQ8NCF5 419 aa23.62■■□□□ 1.37
TSPAN18-209ENST00000520999 WNK3Q9BYP7 1800 aa23.61■■□□□ 1.37
TSPAN18-209ENST00000520999 BCL9O00512 1426 aa23.61■■□□□ 1.37
TSPAN18-209ENST00000520999 RARSP54136 660 aaKnown RBP23.61■■□□□ 1.37
TSPAN18-209ENST00000520999 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.61■■□□□ 1.37
TSPAN18-209ENST00000520999 RBM6P78332 1123 aaKnown RBP23.6■■□□□ 1.37
TSPAN18-209ENST00000520999 TWISTNBQ3B726 338 aaPredicted RBP23.6■■□□□ 1.37
TSPAN18-209ENST00000520999 SUPT16HQ9Y5B9 1047 aaKnown RBP23.6■■□□□ 1.37
TSPAN18-209ENST00000520999 EIF4A1P60842 406 aaKnown RBP23.59■■□□□ 1.37
TSPAN18-209ENST00000520999 ZNF790Q6PG37 636 aa23.59■■□□□ 1.37
TSPAN18-209ENST00000520999 SCN11AQ9UI33 1791 aa23.59■■□□□ 1.37
TSPAN18-209ENST00000520999 HEG1Q9ULI3 1381 aa23.58■■□□□ 1.37
TSPAN18-209ENST00000520999 MARCH10Q8NA82 808 aaPredicted RBP23.58■■□□□ 1.37
TSPAN18-209ENST00000520999 C8orf58Q8NAV2 365 aa23.58■■□□□ 1.37
TSPAN18-209ENST00000520999 GLI3P10071 1580 aa23.57■■□□□ 1.36
TSPAN18-209ENST00000520999 SHANK3Q9BYB0 1731 aa23.57■■□□□ 1.36
TSPAN18-209ENST00000520999 MIS18AQ9NYP9 233 aa23.57■■□□□ 1.36
TSPAN18-209ENST00000520999 THSD7AQ9UPZ6 1657 aa23.57■■□□□ 1.36
TSPAN18-209ENST00000520999 TMOD3Q9NYL9 352 aa23.56■■□□□ 1.36
TSPAN18-209ENST00000520999 TTC5Q8N0Z6 440 aa23.55■■□□□ 1.36
TSPAN18-209ENST00000520999 SEPT12Q8IYM1 358 aa23.54■■□□□ 1.36
TSPAN18-209ENST00000520999 TSPYL6Q8N831 410 aa23.54■■□□□ 1.36
TSPAN18-209ENST00000520999 NEFLP07196 543 aa23.53■■□□□ 1.36
TSPAN18-209ENST00000520999 RRP1P56182 461 aaKnown RBP23.53■■□□□ 1.36
TSPAN18-209ENST00000520999 ERICH6BQ5W0A0 696 aa23.53■■□□□ 1.36
TSPAN18-209ENST00000520999 FMNL2Q96PY5 1086 aa23.52■■□□□ 1.36
TSPAN18-209ENST00000520999 SIPA1L3O60292 1781 aaPredicted RBP23.52■■□□□ 1.36
TSPAN18-209ENST00000520999 IPO8O15397 1037 aaKnown RBP23.51■■□□□ 1.35
TSPAN18-209ENST00000520999 GIGYF1O75420 1035 aaPredicted RBP23.51■■□□□ 1.35
TSPAN18-209ENST00000520999 MS4A1P11836 297 aa23.51■■□□□ 1.35
TSPAN18-209ENST00000520999 CCDC30Q5VVM6 783 aa23.51■■□□□ 1.35
TSPAN18-209ENST00000520999 ARHGAP45Q92619 1136 aa23.51■■□□□ 1.35
TSPAN18-209ENST00000520999 KIF16BQ96L93 1317 aa23.51■■□□□ 1.35
TSPAN18-209ENST00000520999 A0A0G2JS52 829 aa23.5■■□□□ 1.35
TSPAN18-209ENST00000520999 MYT1Q01538 1121 aa23.5■■□□□ 1.35
TSPAN18-209ENST00000520999 VSIG10Q8N0Z9 540 aa23.5■■□□□ 1.35
TSPAN18-209ENST00000520999 SSH1Q8WYL5 1049 aa23.5■■□□□ 1.35
TSPAN18-209ENST00000520999 PIGBQ92521 554 aa23.5■■□□□ 1.35
TSPAN18-209ENST00000520999 KDM3BQ7LBC6 1761 aa23.5■■□□□ 1.35
TSPAN18-209ENST00000520999 SNRPA1P09661 255 aaKnown RBP23.49■■□□□ 1.35
TSPAN18-209ENST00000520999 RXRBP28702 533 aa23.49■■□□□ 1.35
TSPAN18-209ENST00000520999 SMC4Q9NTJ3 1288 aa23.49■■□□□ 1.35
TSPAN18-209ENST00000520999 ELL2O00472 640 aaPredicted RBP23.48■■□□□ 1.35
TSPAN18-209ENST00000520999 KCNQ3O43525 872 aa23.48■■□□□ 1.35
TSPAN18-209ENST00000520999 PDE3AQ14432 1141 aa23.48■■□□□ 1.35
TSPAN18-209ENST00000520999 TEX13AQ9BXU3 409 aaPredicted RBP23.48■■□□□ 1.35
TSPAN18-209ENST00000520999 BCAR3O75815 825 aa23.47■■□□□ 1.35
TSPAN18-209ENST00000520999 PRIM1P49642 420 aaKnown RBP23.47■■□□□ 1.35
TSPAN18-209ENST00000520999 SMARCC1Q92922 1105 aaPredicted RBP23.47■■□□□ 1.35
TSPAN18-209ENST00000520999 STK31Q9BXU1 1019 aa23.47■■□□□ 1.35
TSPAN18-209ENST00000520999 SLC39A6Q13433 755 aa23.46■■□□□ 1.35
TSPAN18-209ENST00000520999 MRPL50Q8N5N7 158 aaKnown RBP23.46■■□□□ 1.35
TSPAN18-209ENST00000520999 ZNF496Q96IT1 587 aaPredicted RBP23.46■■□□□ 1.35
TSPAN18-209ENST00000520999 KRT24Q2M2I5 525 aa23.45■■□□□ 1.34
TSPAN18-209ENST00000520999 ERBB4Q15303 1308 aa23.44■■□□□ 1.34
TSPAN18-209ENST00000520999 HDGFL1Q5TGJ6 251 aa23.44■■□□□ 1.34
TSPAN18-209ENST00000520999 ZKSCAN2Q63HK3 967 aa23.44■■□□□ 1.34
TSPAN18-209ENST00000520999 FAM196AQ6ZSG2 479 aa23.44■■□□□ 1.34
TSPAN18-209ENST00000520999 ATG3Q9NT62 314 aa23.44■■□□□ 1.34
TSPAN18-209ENST00000520999 KRT27Q7Z3Y8 459 aa23.43■■□□□ 1.34
TSPAN18-209ENST00000520999 RGS17Q9UGC6 210 aaPredicted RBP23.43■■□□□ 1.34
TSPAN18-209ENST00000520999 PTPRCP08575 1304 aa23.42■■□□□ 1.34
TSPAN18-209ENST00000520999 DBF4Q9UBU7 674 aaPredicted RBP23.42■■□□□ 1.34
TSPAN18-209ENST00000520999 VIRMAQ69YN4 1812 aaKnown RBP23.42■■□□□ 1.34
TSPAN18-209ENST00000520999 SYTL4Q96C24 671 aaPredicted RBP23.41■■□□□ 1.34
TSPAN18-209ENST00000520999 TOGARAM1Q9Y4F4 1720 aa23.41■■□□□ 1.34
TSPAN18-209ENST00000520999 HMGB2P26583 209 aaKnown RBP23.4■■□□□ 1.34
TSPAN18-209ENST00000520999 CANXP27824 592 aaKnown RBP23.4■■□□□ 1.34
TSPAN18-209ENST00000520999 ATF7IPQ6VMQ6 1270 aa23.4■■□□□ 1.34
TSPAN18-209ENST00000520999 API5Q9BZZ5 524 aaKnown RBP23.4■■□□□ 1.34
TSPAN18-209ENST00000520999 SLC4A2P04920 1241 aa23.39■■□□□ 1.33
TSPAN18-209ENST00000520999 AAMPQ13685 434 aa23.39■■□□□ 1.33
TSPAN18-209ENST00000520999 ASAP1Q9ULH1 1129 aa23.39■■□□□ 1.33
TSPAN18-209ENST00000520999 PAPPAQ13219 1627 aa23.39■■□□□ 1.33
TSPAN18-209ENST00000520999 BCL2L13Q9BXK5 485 aa23.38■■□□□ 1.33
TSPAN18-209ENST00000520999 DDX21Q9NR30 783 aaKnown RBP eCLIP23.38■■□□□ 1.33
TSPAN18-209ENST00000520999 HYPKQ9NX55 129 aa23.38■■□□□ 1.33
TSPAN18-209ENST00000520999 NOB1Q9ULX3 412 aaKnown RBP23.38■■□□□ 1.33
TSPAN18-209ENST00000520999 KCPQ6ZWJ8 1503 aa23.38■■□□□ 1.33
TSPAN18-209ENST00000520999 FRAT1Q92837 279 aaPredicted RBP23.37■■□□□ 1.33
TSPAN18-209ENST00000520999 BCL11BQ9C0K0 894 aaPredicted RBP23.37■■□□□ 1.33
TSPAN18-209ENST00000520999 ACSBG1Q96GR2 724 aa23.36■■□□□ 1.33
TSPAN18-209ENST00000520999 STARD3NLO95772 234 aa23.35■■□□□ 1.33
TSPAN18-209ENST00000520999 EIF2S2P20042 333 aaKnown RBP23.35■■□□□ 1.33
TSPAN18-209ENST00000520999 DZIP1LQ8IYY4 767 aaKnown RBP23.35■■□□□ 1.33
TSPAN18-209ENST00000520999 UBR2Q8IWV8 1755 aa23.35■■□□□ 1.33
TSPAN18-209ENST00000520999 PLIN1O60240 522 aa23.34■■□□□ 1.33
TSPAN18-209ENST00000520999 PTCD1O75127 700 aaKnown RBP23.34■■□□□ 1.33
TSPAN18-209ENST00000520999 TRIM27P14373 513 aa23.34■■□□□ 1.33
TSPAN18-209ENST00000520999 POTEAQ6S8J7 498 aa23.34■■□□□ 1.33
TSPAN18-209ENST00000520999 CHMP4BQ9H444 224 aaKnown RBP23.34■■□□□ 1.33
TSPAN18-209ENST00000520999 USP16Q9Y5T5 823 aa23.34■■□□□ 1.33
TSPAN18-209ENST00000520999 DOT1LQ8TEK3 1739 aa23.33■■□□□ 1.32
TSPAN18-209ENST00000520999 ITGB4P16144 1822 aa23.32■■□□□ 1.32
TSPAN18-209ENST00000520999 KCNQ2O43526 872 aa23.32■■□□□ 1.32
TSPAN18-209ENST00000520999 FKBP8Q14318 412 aa23.32■■□□□ 1.32
TSPAN18-209ENST00000520999 ILDR1Q86SU0 546 aaPredicted RBP23.32■■□□□ 1.32
TSPAN18-209ENST00000520999 GTF3C3Q9Y5Q9 886 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms