RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 HMMRO75330 724 aa31.98■■■□□ 2.71
COL13A1-213ENST00000520267 SPRYD3Q8NCJ5 442 aa31.98■■■□□ 2.71
COL13A1-213ENST00000520267 C1orf167Q5SNV9 1468 aa31.98■■■□□ 2.71
COL13A1-213ENST00000520267 KDM3BQ7LBC6 1761 aa31.98■■■□□ 2.71
COL13A1-213ENST00000520267 GNAI2P04899 355 aa31.98■■■□□ 2.71
COL13A1-213ENST00000520267 HDGFL1Q5TGJ6 251 aa31.97■■■□□ 2.71
COL13A1-213ENST00000520267 N4BP2Q86UW6 1770 aaPredicted RBP31.97■■■□□ 2.71
COL13A1-213ENST00000520267 ZNF530Q6P9A1 599 aaPredicted RBP31.97■■■□□ 2.71
COL13A1-213ENST00000520267 KIF1AQ12756 1690 aa31.97■■■□□ 2.71
COL13A1-213ENST00000520267 PLEKHO1Q53GL0 409 aaPredicted RBP31.96■■■□□ 2.71
COL13A1-213ENST00000520267 AKAP4Q5JQC9 854 aa31.96■■■□□ 2.71
COL13A1-213ENST00000520267 ANKRD24Q8TF21 1146 aa31.96■■■□□ 2.71
COL13A1-213ENST00000520267 NCAPD2Q15021 1401 aa31.95■■■□□ 2.71
COL13A1-213ENST00000520267 EIF4A1P60842 406 aaKnown RBP31.95■■■□□ 2.71
COL13A1-213ENST00000520267 C19orf44Q9H6X5 657 aa31.95■■■□□ 2.71
COL13A1-213ENST00000520267 PHAXQ9H814 394 aaKnown RBP31.94■■■□□ 2.7
COL13A1-213ENST00000520267 KIF2CQ99661 725 aa31.93■■■□□ 2.7
COL13A1-213ENST00000520267 AXIN2Q9Y2T1 843 aa31.93■■■□□ 2.7
COL13A1-213ENST00000520267 GNAI3P08754 354 aa31.93■■■□□ 2.7
COL13A1-213ENST00000520267 HSCBQ8IWL3 235 aa31.93■■■□□ 2.7
COL13A1-213ENST00000520267 KCNQ3O43525 872 aa31.92■■■□□ 2.7
COL13A1-213ENST00000520267 MPRIPQ6WCQ1 1025 aa31.92■■■□□ 2.7
COL13A1-213ENST00000520267 RGPD5Q99666 1765 aa31.92■■■□□ 2.7
COL13A1-213ENST00000520267 PXDNQ92626 1479 aa31.92■■■□□ 2.7
COL13A1-213ENST00000520267 AMOTQ4VCS5 1084 aa31.91■■■□□ 2.7
COL13A1-213ENST00000520267 PXDNLA1KZ92 1463 aa31.91■■■□□ 2.7
COL13A1-213ENST00000520267 EIF2S2P20042 333 aaKnown RBP31.91■■■□□ 2.7
COL13A1-213ENST00000520267 CAMTA1Q9Y6Y1 1673 aa31.9■■■□□ 2.7
COL13A1-213ENST00000520267 TEFQ10587 303 aa31.9■■■□□ 2.7
COL13A1-213ENST00000520267 SNX21Q969T3 373 aa31.89■■■□□ 2.7
COL13A1-213ENST00000520267 GSE1Q14687 1217 aa31.89■■■□□ 2.7
COL13A1-213ENST00000520267 ALS2Q96Q42 1657 aa31.88■■■□□ 2.69
COL13A1-213ENST00000520267 BTBD11A6QL63 1104 aa31.88■■■□□ 2.69
COL13A1-213ENST00000520267 PNMA6EA0A0J9YXQ4 647 aa31.87■■■□□ 2.69
COL13A1-213ENST00000520267 RNMTO43148 476 aaKnown RBP31.87■■■□□ 2.69
COL13A1-213ENST00000520267 ATP8B2P98198 1209 aa31.87■■■□□ 2.69
COL13A1-213ENST00000520267 EXOC6BQ9Y2D4 811 aa31.87■■■□□ 2.69
COL13A1-213ENST00000520267 SDSP20132 328 aa31.87■■■□□ 2.69
COL13A1-213ENST00000520267 USP44Q9H0E7 712 aa31.87■■■□□ 2.69
COL13A1-213ENST00000520267 HOXB7P09629 217 aa31.86■■■□□ 2.69
COL13A1-213ENST00000520267 C1orf141Q5JVX7 400 aa31.86■■■□□ 2.69
COL13A1-213ENST00000520267 LRRFIP2Q9Y608 721 aaKnown RBP31.86■■■□□ 2.69
COL13A1-213ENST00000520267 MST1RQ04912 1400 aa31.85■■■□□ 2.69
COL13A1-213ENST00000520267 STRCP1A6NGW2 1772 aa31.85■■■□□ 2.69
COL13A1-213ENST00000520267 CHPF2Q9P2E5 772 aa31.84■■■□□ 2.69
COL13A1-213ENST00000520267 ZC3H6P61129 1189 aaKnown RBP31.83■■■□□ 2.69
COL13A1-213ENST00000520267 TMEM94Q12767 1356 aa31.82■■■□□ 2.68
COL13A1-213ENST00000520267 NCOA3Q9Y6Q9 1424 aa31.82■■■□□ 2.68
COL13A1-213ENST00000520267 DDX17Q92841 729 aaKnown RBP31.82■■■□□ 2.68
COL13A1-213ENST00000520267 ATF3P18847 181 aa31.81■■■□□ 2.68
COL13A1-213ENST00000520267 OSBPL3Q9H4L5 887 aa31.81■■■□□ 2.68
COL13A1-213ENST00000520267 CHMP5Q9NZZ3 219 aa31.81■■■□□ 2.68
COL13A1-213ENST00000520267 UBTFL1P0CB47 393 aaPredicted RBP31.8■■■□□ 2.68
COL13A1-213ENST00000520267 PDE1AP54750 535 aa31.8■■■□□ 2.68
COL13A1-213ENST00000520267 RBM42Q9BTD8 480 aaKnown RBP31.8■■■□□ 2.68
COL13A1-213ENST00000520267 OVOS2A0A0G2JMS6 1433 aa31.8■■■□□ 2.68
COL13A1-213ENST00000520267 ERBB3P21860 1342 aa31.79■■■□□ 2.68
COL13A1-213ENST00000520267 LRRCC1Q9C099 1032 aa31.79■■■□□ 2.68
COL13A1-213ENST00000520267 EIF5BO60841 1220 aaKnown RBP31.78■■■□□ 2.68
COL13A1-213ENST00000520267 CD2BP2O95400 341 aaKnown RBP31.78■■■□□ 2.68
COL13A1-213ENST00000520267 SRCIN1Q9C0H9 1055 aa31.78■■■□□ 2.68
COL13A1-213ENST00000520267 IBTKQ9P2D0 1353 aaPredicted RBP31.78■■■□□ 2.68
COL13A1-213ENST00000520267 ANXA1P04083 346 aa31.78■■■□□ 2.68
COL13A1-213ENST00000520267 SIPA1L3O60292 1781 aaPredicted RBP31.77■■■□□ 2.68
COL13A1-213ENST00000520267 SALL3Q9BXA9 1300 aa31.77■■■□□ 2.68
COL13A1-213ENST00000520267 CHMP4AQ9BY43 222 aa31.77■■■□□ 2.68
COL13A1-213ENST00000520267 USP26Q9BXU7 913 aa31.76■■■□□ 2.67
COL13A1-213ENST00000520267 PI4KAP2A4QPH2 592 aa31.75■■■□□ 2.67
COL13A1-213ENST00000520267 PI4KAP1Q8N8J0 262 aa31.75■■■□□ 2.67
COL13A1-213ENST00000520267 HSP90AB1P08238 724 aaKnown RBP31.74■■■□□ 2.67
COL13A1-213ENST00000520267 DDIT3P35638 169 aa31.74■■■□□ 2.67
COL13A1-213ENST00000520267 DNAAF4Q8WXU2 420 aa31.74■■■□□ 2.67
COL13A1-213ENST00000520267 BEND3Q5T5X7 828 aa31.74■■■□□ 2.67
COL13A1-213ENST00000520267 CASC1Q6TDU7 716 aa31.74■■■□□ 2.67
COL13A1-213ENST00000520267 TUBGCP6Q96RT7 1819 aa31.73■■■□□ 2.67
COL13A1-213ENST00000520267 ADAMTS7Q9UKP4 1686 aa31.73■■■□□ 2.67
COL13A1-213ENST00000520267 TSHZ3Q63HK5 1081 aa31.73■■■□□ 2.67
COL13A1-213ENST00000520267 DCCP43146 1447 aa31.72■■■□□ 2.67
COL13A1-213ENST00000520267 HEG1Q9ULI3 1381 aa31.72■■■□□ 2.67
COL13A1-213ENST00000520267 GIGYF1O75420 1035 aaPredicted RBP31.72■■■□□ 2.67
COL13A1-213ENST00000520267 ADCY9O60503 1353 aa31.72■■■□□ 2.67
COL13A1-213ENST00000520267 SSH3Q8TE77 659 aa31.72■■■□□ 2.67
COL13A1-213ENST00000520267 DBF4Q9UBU7 674 aaPredicted RBP31.71■■■□□ 2.67
COL13A1-213ENST00000520267 PRAMEF22A3QJZ6 481 aa31.7■■■□□ 2.66
COL13A1-213ENST00000520267 NBPF7P0C2Y1 421 aaPredicted RBP31.7■■■□□ 2.66
COL13A1-213ENST00000520267 COL18A1P39060 1754 aa31.69■■■□□ 2.66
COL13A1-213ENST00000520267 MX1P20591 662 aa31.69■■■□□ 2.66
COL13A1-213ENST00000520267 PPP1R42Q7Z4L9 355 aa31.69■■■□□ 2.66
COL13A1-213ENST00000520267 K7ELQ4 463 aaPredicted RBP31.69■■■□□ 2.66
COL13A1-213ENST00000520267 NLRP2Q9NX02 1062 aa31.69■■■□□ 2.66
COL13A1-213ENST00000520267 LMTK3Q96Q04 1460 aa31.68■■■□□ 2.66
COL13A1-213ENST00000520267 CRYBG1Q9Y4K1 1723 aa31.68■■■□□ 2.66
COL13A1-213ENST00000520267 POLA2Q14181 598 aa31.68■■■□□ 2.66
COL13A1-213ENST00000520267 PROSER3Q2NL68 480 aa31.68■■■□□ 2.66
COL13A1-213ENST00000520267 CABLES1Q8TDN4 633 aa31.68■■■□□ 2.66
COL13A1-213ENST00000520267 RAPGEF4Q8WZA2 1011 aa31.67■■■□□ 2.66
COL13A1-213ENST00000520267 MCM4P33991 863 aa31.66■■■□□ 2.66
COL13A1-213ENST00000520267 RABEP1Q15276 862 aa31.65■■■□□ 2.66
COL13A1-213ENST00000520267 ERC2O15083 957 aa31.64■■■□□ 2.66
COL13A1-213ENST00000520267 CADPS2Q86UW7 1296 aa31.64■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms