RNA–Protein interactions for RNA: ENST00000520254.5

FAM49B-217, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-217ENST00000520254 PHACTR3Q96KR7 559 aa25.29■■□□□ 1.64
FAM49B-217ENST00000520254 SLC52A2Q9HAB3 445 aa25.29■■□□□ 1.64
FAM49B-217ENST00000520254 ATG3Q9NT62 314 aa25.29■■□□□ 1.64
FAM49B-217ENST00000520254 ANP32CO43423 234 aa25.28■■□□□ 1.64
FAM49B-217ENST00000520254 RBM42Q9BTD8 480 aaKnown RBP25.28■■□□□ 1.64
FAM49B-217ENST00000520254 C5P01031 1676 aa25.27■■□□□ 1.64
FAM49B-217ENST00000520254 ATP6V1AP38606 617 aa25.27■■□□□ 1.64
FAM49B-217ENST00000520254 ZNF827Q17R98 1081 aa25.27■■□□□ 1.64
FAM49B-217ENST00000520254 LGR6Q9HBX8 967 aa25.27■■□□□ 1.64
FAM49B-217ENST00000520254 AK7Q96M32 723 aa25.26■■□□□ 1.63
FAM49B-217ENST00000520254 MRC1P22897 1456 aa25.26■■□□□ 1.63
FAM49B-217ENST00000520254 AKT1S1Q96B36 256 aa25.25■■□□□ 1.63
FAM49B-217ENST00000520254 LRP5O75197 1615 aa25.23■■□□□ 1.63
FAM49B-217ENST00000520254 TTC5Q8N0Z6 440 aa25.23■■□□□ 1.63
FAM49B-217ENST00000520254 SPON1Q9HCB6 807 aa25.23■■□□□ 1.63
FAM49B-217ENST00000520254 MSH5O43196 834 aa25.22■■□□□ 1.63
FAM49B-217ENST00000520254 PTCD1O75127 700 aaKnown RBP25.22■■□□□ 1.63
FAM49B-217ENST00000520254 ADAMTS7Q9UKP4 1686 aa25.21■■□□□ 1.63
FAM49B-217ENST00000520254 VIRMAQ69YN4 1812 aaKnown RBP25.2■■□□□ 1.62
FAM49B-217ENST00000520254 CASZ1Q86V15 1759 aa25.2■■□□□ 1.62
FAM49B-217ENST00000520254 C4BP0C0L5 1744 aa25.2■■□□□ 1.62
FAM49B-217ENST00000520254 HTATSF1O43719 755 aaKnown RBP25.19■■□□□ 1.62
FAM49B-217ENST00000520254 ZBTB7AO95365 584 aa25.19■■□□□ 1.62
FAM49B-217ENST00000520254 FLAD1Q8NFF5 587 aa25.19■■□□□ 1.62
FAM49B-217ENST00000520254 PPP1R1BQ9UD71 204 aaPredicted RBP25.19■■□□□ 1.62
FAM49B-217ENST00000520254 NFE2L2Q16236 605 aa25.18■■□□□ 1.62
FAM49B-217ENST00000520254 IL17REQ8NFR9 667 aa25.18■■□□□ 1.62
FAM49B-217ENST00000520254 TAF1LQ8IZX4 1826 aa25.18■■□□□ 1.62
FAM49B-217ENST00000520254 LINC00116Q8NCU8 138 aa25.17■■□□□ 1.62
FAM49B-217ENST00000520254 PLEKHF1Q96S99 279 aa25.17■■□□□ 1.62
FAM49B-217ENST00000520254 MTFR1LQ9H019 292 aa25.17■■□□□ 1.62
FAM49B-217ENST00000520254 QSER1Q2KHR3 1735 aa25.17■■□□□ 1.62
FAM49B-217ENST00000520254 PNPLA7Q6ZV29 1317 aa25.16■■□□□ 1.62
FAM49B-217ENST00000520254 ITPK1Q13572 414 aa25.16■■□□□ 1.62
FAM49B-217ENST00000520254 MCM10Q7L590 875 aa25.16■■□□□ 1.62
FAM49B-217ENST00000520254 PDGFDQ9GZP0 370 aaPredicted RBP25.16■■□□□ 1.62
FAM49B-217ENST00000520254 CEMIPQ8WUJ3 1361 aa25.16■■□□□ 1.62
FAM49B-217ENST00000520254 GNPATO15228 680 aa25.15■■□□□ 1.62
FAM49B-217ENST00000520254 SLC39A6Q13433 755 aa25.15■■□□□ 1.62
FAM49B-217ENST00000520254 SLC16A10Q8TF71 515 aa25.15■■□□□ 1.62
FAM49B-217ENST00000520254 ZNF831Q5JPB2 1677 aa25.15■■□□□ 1.62
FAM49B-217ENST00000520254 BTBD11A6QL63 1104 aa25.14■■□□□ 1.62
FAM49B-217ENST00000520254 PHF14O94880 888 aa25.14■■□□□ 1.62
FAM49B-217ENST00000520254 LMOD3Q0VAK6 560 aa25.13■■□□□ 1.61
FAM49B-217ENST00000520254 CCDC146Q8IYE0 955 aa25.13■■□□□ 1.61
FAM49B-217ENST00000520254 ATF5Q9Y2D1 282 aaPredicted RBP25.13■■□□□ 1.61
FAM49B-217ENST00000520254 RUNDC1Q96C34 613 aa25.12■■□□□ 1.61
FAM49B-217ENST00000520254 TUBGCP6Q96RT7 1819 aa25.12■■□□□ 1.61
FAM49B-217ENST00000520254 SSFA2P28290 1259 aa25.11■■□□□ 1.61
FAM49B-217ENST00000520254 DCTN1Q14203 1278 aa25.11■■□□□ 1.61
FAM49B-217ENST00000520254 ADAMTS8Q9UP79 889 aa25.11■■□□□ 1.61
FAM49B-217ENST00000520254 RTCBQ9Y3I0 505 aaKnown RBP25.11■■□□□ 1.61
FAM49B-217ENST00000520254 POLD1P28340 1107 aa25.1■■□□□ 1.61
FAM49B-217ENST00000520254 ZNF790Q6PG37 636 aa25.1■■□□□ 1.61
FAM49B-217ENST00000520254 SLC4A9Q96Q91 983 aa25.1■■□□□ 1.61
FAM49B-217ENST00000520254 CNTNAP4Q9C0A0 1308 aa25.1■■□□□ 1.61
FAM49B-217ENST00000520254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.09■■□□□ 1.61
FAM49B-217ENST00000520254 RIPK4P57078 832 aa25.09■■□□□ 1.61
FAM49B-217ENST00000520254 COL23A1Q86Y22 540 aaPredicted RBP25.09■■□□□ 1.61
FAM49B-217ENST00000520254 MRS2Q9HD23 443 aa25.09■■□□□ 1.61
FAM49B-217ENST00000520254 KCPQ6ZWJ8 1503 aa25.08■■□□□ 1.61
FAM49B-217ENST00000520254 RC3H1Q5TC82 1133 aaKnown RBP25.08■■□□□ 1.61
FAM49B-217ENST00000520254 VSIG10Q8N0Z9 540 aa25.08■■□□□ 1.61
FAM49B-217ENST00000520254 FMNL2Q96PY5 1086 aa25.08■■□□□ 1.61
FAM49B-217ENST00000520254 SIPA1L3O60292 1781 aaPredicted RBP25.08■■□□□ 1.6
FAM49B-217ENST00000520254 COL5A3P25940 1745 aaPredicted RBP25.07■■□□□ 1.6
FAM49B-217ENST00000520254 CICQ96RK0 1608 aaPredicted RBP25.06■■□□□ 1.6
FAM49B-217ENST00000520254 TMPOP42166 694 aaKnown RBP25.06■■□□□ 1.6
FAM49B-217ENST00000520254 CRKLP46109 303 aaKnown RBP25.06■■□□□ 1.6
FAM49B-217ENST00000520254 TAF7Q15545 349 aaPredicted RBP25.06■■□□□ 1.6
FAM49B-217ENST00000520254 NEUROD2Q15784 382 aa25.06■■□□□ 1.6
FAM49B-217ENST00000520254 DNAJC10Q8IXB1 793 aa25.06■■□□□ 1.6
FAM49B-217ENST00000520254 PNISRQ8TF01 805 aaKnown RBP25.06■■□□□ 1.6
FAM49B-217ENST00000520254 TJP1Q07157 1748 aa25.06■■□□□ 1.6
FAM49B-217ENST00000520254 DLG5Q8TDM6 1919 aa25.06■■□□□ 1.6
FAM49B-217ENST00000520254 UBR3Q6ZT12 1888 aa25.05■■□□□ 1.6
FAM49B-217ENST00000520254 STARD3NLO95772 234 aa25.05■■□□□ 1.6
FAM49B-217ENST00000520254 TRAPPC3LQ5T215 181 aa25.05■■□□□ 1.6
FAM49B-217ENST00000520254 TEX13AQ9BXU3 409 aaPredicted RBP25.05■■□□□ 1.6
FAM49B-217ENST00000520254 UBR2Q8IWV8 1755 aa25.05■■□□□ 1.6
FAM49B-217ENST00000520254 ADRA2BP18089 450 aa25.04■■□□□ 1.6
FAM49B-217ENST00000520254 ZNF496Q96IT1 587 aaPredicted RBP25.04■■□□□ 1.6
FAM49B-217ENST00000520254 RRP7AQ9Y3A4 280 aaKnown RBP25.04■■□□□ 1.6
FAM49B-217ENST00000520254 HEG1Q9ULI3 1381 aa25.04■■□□□ 1.6
FAM49B-217ENST00000520254 CCDC87Q9NVE4 849 aa25.03■■□□□ 1.6
FAM49B-217ENST00000520254 SRCAPQ6ZRS2 3230 aa25.03■■□□□ 1.6
FAM49B-217ENST00000520254 RPS6KA4O75676 772 aa25.02■■□□□ 1.6
FAM49B-217ENST00000520254 MSL1Q68DK7 614 aa25.02■■□□□ 1.6
FAM49B-217ENST00000520254 RFC4P35249 363 aa25.01■■□□□ 1.59
FAM49B-217ENST00000520254 PTGER2P43116 358 aa25.01■■□□□ 1.59
FAM49B-217ENST00000520254 THUMPD2Q9BTF0 503 aaKnown RBP25.01■■□□□ 1.59
FAM49B-217ENST00000520254 NPM2Q86SE8 214 aaKnown RBP25■■□□□ 1.59
FAM49B-217ENST00000520254 ARXQ96QS3 562 aa25■■□□□ 1.59
FAM49B-217ENST00000520254 CYP19A1P11511 503 aaPredicted RBP24.99■■□□□ 1.59
FAM49B-217ENST00000520254 AMIGO3Q86WK7 504 aa24.99■■□□□ 1.59
FAM49B-217ENST00000520254 CCDC184Q52MB2 194 aa24.98■■□□□ 1.59
FAM49B-217ENST00000520254 SMIM5Q71RC9 77 aa24.98■■□□□ 1.59
FAM49B-217ENST00000520254 KLHL34Q8N239 644 aa24.98■■□□□ 1.59
FAM49B-217ENST00000520254 KCNQ3O43525 872 aa24.97■■□□□ 1.59
FAM49B-217ENST00000520254 MIS18AQ9NYP9 233 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms