RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 TNS2Q63HR2 1409 aa22.09■■□□□ 1.13
TSNARE1-205ENST00000520166 SCN11AQ9UI33 1791 aa22.09■■□□□ 1.13
TSNARE1-205ENST00000520166 SLC39A6Q13433 755 aa22.09■■□□□ 1.13
TSNARE1-205ENST00000520166 ILDR1Q86SU0 546 aaPredicted RBP22.09■■□□□ 1.13
TSNARE1-205ENST00000520166 SLC52A2Q9HAB3 445 aa22.09■■□□□ 1.13
TSNARE1-205ENST00000520166 BTBD11A6QL63 1104 aa22.07■■□□□ 1.12
TSNARE1-205ENST00000520166 RCAN3Q9UKA8 241 aa22.07■■□□□ 1.12
TSNARE1-205ENST00000520166 HSP90AB1P08238 724 aaKnown RBP22.06■■□□□ 1.12
TSNARE1-205ENST00000520166 TOGARAM1Q9Y4F4 1720 aa22.05■■□□□ 1.12
TSNARE1-205ENST00000520166 ONECUT3O60422 494 aaPredicted RBP22.05■■□□□ 1.12
TSNARE1-205ENST00000520166 BCAR3O75815 825 aa22.05■■□□□ 1.12
TSNARE1-205ENST00000520166 CABP4P57796 275 aa22.05■■□□□ 1.12
TSNARE1-205ENST00000520166 SEPT12Q8IYM1 358 aa22.05■■□□□ 1.12
TSNARE1-205ENST00000520166 TCERG1O14776 1098 aaKnown RBP22.04■■□□□ 1.12
TSNARE1-205ENST00000520166 ACSBG1Q96GR2 724 aa22.04■■□□□ 1.12
TSNARE1-205ENST00000520166 POTEAQ6S8J7 498 aa22.03■■□□□ 1.12
TSNARE1-205ENST00000520166 BCL2L13Q9BXK5 485 aa22.03■■□□□ 1.12
TSNARE1-205ENST00000520166 SIPA1L3O60292 1781 aaPredicted RBP22.03■■□□□ 1.12
TSNARE1-205ENST00000520166 THSD7AQ9UPZ6 1657 aa22.03■■□□□ 1.12
TSNARE1-205ENST00000520166 VAMP4O75379 141 aa22.03■■□□□ 1.12
TSNARE1-205ENST00000520166 ZNF772Q68DY9 489 aaPredicted RBP22.03■■□□□ 1.12
TSNARE1-205ENST00000520166 ERVV-2B6SEH9 535 aa22.01■■□□□ 1.11
TSNARE1-205ENST00000520166 PLIN1O60240 522 aa22.01■■□□□ 1.11
TSNARE1-205ENST00000520166 PRIM1P49642 420 aaKnown RBP22.01■■□□□ 1.11
TSNARE1-205ENST00000520166 MRC1P22897 1456 aa22■■□□□ 1.11
TSNARE1-205ENST00000520166 PRAMEF22A3QJZ6 481 aa22■■□□□ 1.11
TSNARE1-205ENST00000520166 EIF4A1P60842 406 aaKnown RBP22■■□□□ 1.11
TSNARE1-205ENST00000520166 IRX6P78412 446 aaPredicted RBP22■■□□□ 1.11
TSNARE1-205ENST00000520166 TWISTNBQ3B726 338 aaPredicted RBP22■■□□□ 1.11
TSNARE1-205ENST00000520166 PTF1AQ7RTS3 328 aa22■■□□□ 1.11
TSNARE1-205ENST00000520166 PIGBQ92521 554 aa22■■□□□ 1.11
TSNARE1-205ENST00000520166 KCNQ2O43526 872 aa22■■□□□ 1.11
TSNARE1-205ENST00000520166 RARSP54136 660 aaKnown RBP22■■□□□ 1.11
TSNARE1-205ENST00000520166 SYTL4Q96C24 671 aaPredicted RBP22■■□□□ 1.11
TSNARE1-205ENST00000520166 KAT6BQ8WYB5 2073 aa21.99■■□□□ 1.11
TSNARE1-205ENST00000520166 ZNF790Q6PG37 636 aa21.98■■□□□ 1.11
TSNARE1-205ENST00000520166 KDM3BQ7LBC6 1761 aa21.98■■□□□ 1.11
TSNARE1-205ENST00000520166 SSH1Q8WYL5 1049 aa21.97■■□□□ 1.11
TSNARE1-205ENST00000520166 NECTIN2Q92692 538 aa21.97■■□□□ 1.11
TSNARE1-205ENST00000520166 BABAM1Q9NWV8 329 aa21.97■■□□□ 1.11
TSNARE1-205ENST00000520166 ASAP1Q9ULH1 1129 aa21.97■■□□□ 1.11
TSNARE1-205ENST00000520166 RBM6P78332 1123 aaKnown RBP21.97■■□□□ 1.11
TSNARE1-205ENST00000520166 TMOD3Q9NYL9 352 aa21.97■■□□□ 1.11
TSNARE1-205ENST00000520166 ZNF496Q96IT1 587 aaPredicted RBP21.96■■□□□ 1.11
TSNARE1-205ENST00000520166 ITGB4P16144 1822 aa21.95■■□□□ 1.1
TSNARE1-205ENST00000520166 DOT1LQ8TEK3 1739 aa21.95■■□□□ 1.1
TSNARE1-205ENST00000520166 RXRBP28702 533 aa21.94■■□□□ 1.1
TSNARE1-205ENST00000520166 ATG3Q9NT62 314 aa21.94■■□□□ 1.1
TSNARE1-205ENST00000520166 TNNQ9UQP3 1299 aa21.94■■□□□ 1.1
TSNARE1-205ENST00000520166 RNF123Q5XPI4 1314 aa21.93■■□□□ 1.1
TSNARE1-205ENST00000520166 EP400Q96L91 3159 aa21.93■■□□□ 1.1
TSNARE1-205ENST00000520166 BRWD3Q6RI45 1802 aa21.93■■□□□ 1.1
TSNARE1-205ENST00000520166 BCL9O00512 1426 aa21.92■■□□□ 1.1
TSNARE1-205ENST00000520166 PTCD1O75127 700 aaKnown RBP21.92■■□□□ 1.1
TSNARE1-205ENST00000520166 HEG1Q9ULI3 1381 aa21.92■■□□□ 1.1
TSNARE1-205ENST00000520166 GIGYF1O75420 1035 aaPredicted RBP21.92■■□□□ 1.1
TSNARE1-205ENST00000520166 RRP1P56182 461 aaKnown RBP21.92■■□□□ 1.1
TSNARE1-205ENST00000520166 C20orf194Q5TEA3 1177 aa21.92■■□□□ 1.1
TSNARE1-205ENST00000520166 EIF2S2P20042 333 aaKnown RBP21.91■■□□□ 1.1
TSNARE1-205ENST00000520166 SMC4Q9NTJ3 1288 aa21.91■■□□□ 1.1
TSNARE1-205ENST00000520166 CT47B1P0C2W7 299 aaPredicted RBP21.9■■□□□ 1.1
TSNARE1-205ENST00000520166 TTC5Q8N0Z6 440 aa21.9■■□□□ 1.1
TSNARE1-205ENST00000520166 KRT27Q7Z3Y8 459 aa21.89■■□□□ 1.1
TSNARE1-205ENST00000520166 MRPL50Q8N5N7 158 aaKnown RBP21.89■■□□□ 1.1
TSNARE1-205ENST00000520166 FRAT1Q92837 279 aaPredicted RBP21.89■■□□□ 1.1
TSNARE1-205ENST00000520166 USP16Q9Y5T5 823 aa21.89■■□□□ 1.09
TSNARE1-205ENST00000520166 SLC4A9Q96Q91 983 aa21.88■■□□□ 1.09
TSNARE1-205ENST00000520166 KCPQ6ZWJ8 1503 aa21.88■■□□□ 1.09
TSNARE1-205ENST00000520166 ANXA1P04083 346 aa21.87■■□□□ 1.09
TSNARE1-205ENST00000520166 RGS12O14924 1447 aa21.86■■□□□ 1.09
TSNARE1-205ENST00000520166 PAPPAQ13219 1627 aa21.86■■□□□ 1.09
TSNARE1-205ENST00000520166 G2E3Q7L622 706 aa21.86■■□□□ 1.09
TSNARE1-205ENST00000520166 FMNL2Q96PY5 1086 aa21.86■■□□□ 1.09
TSNARE1-205ENST00000520166 NOB1Q9ULX3 412 aaKnown RBP21.86■■□□□ 1.09
TSNARE1-205ENST00000520166 GTF3C3Q9Y5Q9 886 aa21.86■■□□□ 1.09
TSNARE1-205ENST00000520166 PIP4K2AP48426 406 aaPredicted RBP21.86■■□□□ 1.09
TSNARE1-205ENST00000520166 RBM42Q9BTD8 480 aaKnown RBP21.86■■□□□ 1.09
TSNARE1-205ENST00000520166 C5P01031 1676 aa21.85■■□□□ 1.09
TSNARE1-205ENST00000520166 FKBP8Q14318 412 aa21.85■■□□□ 1.09
TSNARE1-205ENST00000520166 ALDH1L2Q3SY69 923 aa21.85■■□□□ 1.09
TSNARE1-205ENST00000520166 HDGFL1Q5TGJ6 251 aa21.85■■□□□ 1.09
TSNARE1-205ENST00000520166 SLC4A2P04920 1241 aa21.84■■□□□ 1.09
TSNARE1-205ENST00000520166 PROSER3Q2NL68 480 aa21.84■■□□□ 1.09
TSNARE1-205ENST00000520166 UBR2Q8IWV8 1755 aa21.83■■□□□ 1.09
TSNARE1-205ENST00000520166 SNRPA1P09661 255 aaKnown RBP21.83■■□□□ 1.08
TSNARE1-205ENST00000520166 KCNQ4P56696 695 aa21.83■■□□□ 1.08
TSNARE1-205ENST00000520166 CHPF2Q9P2E5 772 aa21.83■■□□□ 1.08
TSNARE1-205ENST00000520166 RLBP1P12271 317 aa21.82■■□□□ 1.08
TSNARE1-205ENST00000520166 CLUAP1Q96AJ1 413 aa21.82■■□□□ 1.08
TSNARE1-205ENST00000520166 PANK1Q8TE04 598 aa21.81■■□□□ 1.08
TSNARE1-205ENST00000520166 ZNF428Q96B54 188 aa21.81■■□□□ 1.08
TSNARE1-205ENST00000520166 PHAXQ9H814 394 aaKnown RBP21.81■■□□□ 1.08
TSNARE1-205ENST00000520166 CCDC30Q5VVM6 783 aa21.8■■□□□ 1.08
TSNARE1-205ENST00000520166 DNAJC10Q8IXB1 793 aa21.8■■□□□ 1.08
TSNARE1-205ENST00000520166 HOXB7P09629 217 aa21.8■■□□□ 1.08
TSNARE1-205ENST00000520166 PDIA6Q15084 440 aa21.8■■□□□ 1.08
TSNARE1-205ENST00000520166 SBF2Q86WG5 1849 aa21.8■■□□□ 1.08
TSNARE1-205ENST00000520166 TRIM37O94972 964 aa21.79■■□□□ 1.08
TSNARE1-205ENST00000520166 CANXP27824 592 aaKnown RBP21.79■■□□□ 1.08
TSNARE1-205ENST00000520166 A1BGP04217 495 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms