RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 GRIN3BO60391 1043 aa16.24■□□□□ 0.19
POLB-208ENST00000520008 SMIM5Q71RC9 77 aa16.24■□□□□ 0.19
POLB-208ENST00000520008 POLR3GLQ9BT43 218 aa16.24■□□□□ 0.19
POLB-208ENST00000520008 ATG3Q9NT62 314 aa16.24■□□□□ 0.19
POLB-208ENST00000520008 CICQ96RK0 1608 aaPredicted RBP16.23■□□□□ 0.19
POLB-208ENST00000520008 KIAA1551Q9HCM1 1747 aa16.23■□□□□ 0.19
POLB-208ENST00000520008 C1QTNF8P60827 252 aa16.23■□□□□ 0.19
POLB-208ENST00000520008 KIF13BQ9NQT8 1826 aa16.23■□□□□ 0.19
POLB-208ENST00000520008 PHF14O94880 888 aa16.22■□□□□ 0.19
POLB-208ENST00000520008 ERVV-2B6SEH9 535 aa16.21■□□□□ 0.19
POLB-208ENST00000520008 ATP6V1AP38606 617 aa16.21■□□□□ 0.19
POLB-208ENST00000520008 SLC4A9Q96Q91 983 aa16.21■□□□□ 0.19
POLB-208ENST00000520008 ADCY9O60503 1353 aa16.21■□□□□ 0.19
POLB-208ENST00000520008 C4AP0C0L4 1744 aa16.2■□□□□ 0.18
POLB-208ENST00000520008 GNPATO15228 680 aa16.2■□□□□ 0.18
POLB-208ENST00000520008 DCAF5Q96JK2 942 aa16.2■□□□□ 0.18
POLB-208ENST00000520008 HSP90AB1P08238 724 aaKnown RBP16.18■□□□□ 0.18
POLB-208ENST00000520008 AEBP1Q8IUX7 1158 aa16.18■□□□□ 0.18
POLB-208ENST00000520008 TJP1Q07157 1748 aa16.18■□□□□ 0.18
POLB-208ENST00000520008 MYH14Q7Z406 1995 aaKnown RBP16.18■□□□□ 0.18
POLB-208ENST00000520008 SCN11AQ9UI33 1791 aa16.18■□□□□ 0.18
POLB-208ENST00000520008 GIGYF1O75420 1035 aaPredicted RBP16.17■□□□□ 0.18
POLB-208ENST00000520008 AMOTQ4VCS5 1084 aa16.17■□□□□ 0.18
POLB-208ENST00000520008 PLEKHO1Q53GL0 409 aaPredicted RBP16.17■□□□□ 0.18
POLB-208ENST00000520008 ATP10DQ9P241 1426 aa16.17■□□□□ 0.18
POLB-208ENST00000520008 CNTNAP4Q9C0A0 1308 aa16.17■□□□□ 0.18
POLB-208ENST00000520008 PXDNLA1KZ92 1463 aa16.16■□□□□ 0.18
POLB-208ENST00000520008 ZNF530Q6P9A1 599 aaPredicted RBP16.16■□□□□ 0.18
POLB-208ENST00000520008 MORC1Q86VD1 984 aa16.16■□□□□ 0.18
POLB-208ENST00000520008 ADAMTS7Q9UKP4 1686 aa16.15■□□□□ 0.18
POLB-208ENST00000520008 IL13P35225 146 aa16.15■□□□□ 0.18
POLB-208ENST00000520008 AMER1Q5JTC6 1135 aaPredicted RBP16.15■□□□□ 0.18
POLB-208ENST00000520008 RC3H1Q5TC82 1133 aaKnown RBP16.15■□□□□ 0.18
POLB-208ENST00000520008 C10orf71Q711Q0 1435 aa16.15■□□□□ 0.18
POLB-208ENST00000520008 BRCA1P38398 1863 aaKnown RBP16.14■□□□□ 0.17
POLB-208ENST00000520008 SENP3-EIF4A1A0A087X0R7 540 aa16.14■□□□□ 0.17
POLB-208ENST00000520008 RTCBQ9Y3I0 505 aaKnown RBP16.14■□□□□ 0.17
POLB-208ENST00000520008 MRC1P22897 1456 aa16.14■□□□□ 0.17
POLB-208ENST00000520008 N4BP2Q86UW6 1770 aaPredicted RBP16.13■□□□□ 0.17
POLB-208ENST00000520008 MMP10P09238 476 aa16.13■□□□□ 0.17
POLB-208ENST00000520008 CCER1Q8TC90 406 aaPredicted RBP16.13■□□□□ 0.17
POLB-208ENST00000520008 RBM42Q9BTD8 480 aaKnown RBP16.13■□□□□ 0.17
POLB-208ENST00000520008 KNSTRNQ9Y448 316 aa16.13■□□□□ 0.17
POLB-208ENST00000520008 KIF7Q2M1P5 1343 aa16.13■□□□□ 0.17
POLB-208ENST00000520008 VIRMAQ69YN4 1812 aaKnown RBP16.12■□□□□ 0.17
POLB-208ENST00000520008 CABP4P57796 275 aa16.12■□□□□ 0.17
POLB-208ENST00000520008 TRAPPC3LQ5T215 181 aa16.12■□□□□ 0.17
POLB-208ENST00000520008 SULT6B1Q6IMI4 303 aa16.12■□□□□ 0.17
POLB-208ENST00000520008 ARHGEF1Q92888 912 aaKnown RBP16.12■□□□□ 0.17
POLB-208ENST00000520008 RPS6KA4O75676 772 aa16.11■□□□□ 0.17
POLB-208ENST00000520008 GYS1P13807 737 aa16.11■□□□□ 0.17
POLB-208ENST00000520008 MTHFSP49914 203 aa16.11■□□□□ 0.17
POLB-208ENST00000520008 NLGN1Q8N2Q7 840 aa16.11■□□□□ 0.17
POLB-208ENST00000520008 C1orf141Q5JVX7 400 aa16.1■□□□□ 0.17
POLB-208ENST00000520008 NFATC2IPQ8NCF5 419 aa16.1■□□□□ 0.17
POLB-208ENST00000520008 PER1O15534 1290 aaPredicted RBP16.09■□□□□ 0.17
POLB-208ENST00000520008 WWC3Q9ULE0 1092 aa16.09■□□□□ 0.17
POLB-208ENST00000520008 TGFB2P61812 414 aa16.08■□□□□ 0.16
POLB-208ENST00000520008 KCPQ6ZWJ8 1503 aa16.08■□□□□ 0.16
POLB-208ENST00000520008 CEP350Q5VT06 3117 aa16.07■□□□□ 0.16
POLB-208ENST00000520008 PTCD1O75127 700 aaKnown RBP16.07■□□□□ 0.16
POLB-208ENST00000520008 CRKLP46109 303 aaKnown RBP16.07■□□□□ 0.16
POLB-208ENST00000520008 AKAP4Q5JQC9 854 aa16.07■□□□□ 0.16
POLB-208ENST00000520008 COL3A1P02461 1466 aaPredicted RBP16.07■□□□□ 0.16
POLB-208ENST00000520008 UBR2Q8IWV8 1755 aa16.07■□□□□ 0.16
POLB-208ENST00000520008 ARFGEF1Q9Y6D6 1849 aa16.07■□□□□ 0.16
POLB-208ENST00000520008 USP42Q9H9J4 1324 aaKnown RBP16.06■□□□□ 0.16
POLB-208ENST00000520008 RFC4P35249 363 aa16.06■□□□□ 0.16
POLB-208ENST00000520008 GPBP1L1Q9HC44 474 aaPredicted RBP16.06■□□□□ 0.16
POLB-208ENST00000520008 SLC52A2Q9HAB3 445 aa16.05■□□□□ 0.16
POLB-208ENST00000520008 CCDC87Q9NVE4 849 aa16.05■□□□□ 0.16
POLB-208ENST00000520008 NPC1L1Q9UHC9 1359 aa16.04■□□□□ 0.16
POLB-208ENST00000520008 INTS5Q6P9B9 1019 aaKnown RBP16.04■□□□□ 0.16
POLB-208ENST00000520008 LGR6Q9HBX8 967 aa16.04■□□□□ 0.16
POLB-208ENST00000520008 A0A0G2JLW4 131 aa16.03■□□□□ 0.16
POLB-208ENST00000520008 KCNA3P22001 575 aa16.03■□□□□ 0.16
POLB-208ENST00000520008 SRP68Q9UHB9 627 aaKnown RBP16.03■□□□□ 0.16
POLB-208ENST00000520008 PARP3Q9Y6F1 533 aa16.03■□□□□ 0.16
POLB-208ENST00000520008 NRXN2Q9P2S2 1712 aa16.02■□□□□ 0.16
POLB-208ENST00000520008 RNMTO43148 476 aaKnown RBP16.02■□□□□ 0.16
POLB-208ENST00000520008 HMOX1P09601 288 aa16.02■□□□□ 0.16
POLB-208ENST00000520008 DPEP1P16444 411 aa16.02■□□□□ 0.16
POLB-208ENST00000520008 DDR1Q08345 913 aa16.02■□□□□ 0.16
POLB-208ENST00000520008 FKBP8Q14318 412 aa16.02■□□□□ 0.16
POLB-208ENST00000520008 SIPA1L3O60292 1781 aaPredicted RBP16.02■□□□□ 0.15
POLB-208ENST00000520008 SOS1Q07889 1333 aaPredicted RBP16.01■□□□□ 0.15
POLB-208ENST00000520008 KIF3CO14782 793 aa16.01■□□□□ 0.15
POLB-208ENST00000520008 MTHFSDQ2M296 383 aaKnown RBP16.01■□□□□ 0.15
POLB-208ENST00000520008 DNAJC10Q8IXB1 793 aa16.01■□□□□ 0.15
POLB-208ENST00000520008 ZNF526Q8TF50 670 aaPredicted RBP16.01■□□□□ 0.15
POLB-208ENST00000520008 BCS1LQ9Y276 419 aa16.01■□□□□ 0.15
POLB-208ENST00000520008 DIAPH1O60610 1272 aaKnown RBP16■□□□□ 0.15
POLB-208ENST00000520008 AFDNP55196 1824 aaKnown RBP16■□□□□ 0.15
POLB-208ENST00000520008 POLRMTO00411 1230 aaKnown RBP15.99■□□□□ 0.15
POLB-208ENST00000520008 CYP19A1P11511 503 aaPredicted RBP15.99■□□□□ 0.15
POLB-208ENST00000520008 TM4SF1P30408 202 aa15.99■□□□□ 0.15
POLB-208ENST00000520008 SLC39A6Q13433 755 aa15.99■□□□□ 0.15
POLB-208ENST00000520008 CC2D1BQ5T0F9 858 aaKnown RBP15.99■□□□□ 0.15
POLB-208ENST00000520008 DLEC1Q9Y238 1755 aa15.99■□□□□ 0.15
POLB-208ENST00000520008 COL15A1P39059 1388 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms