RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 MYO1CO00159 1063 aa16.18■□□□□ 0.18
PABPC1-208ENST00000519004 CASQ1P31415 396 aa16.18■□□□□ 0.18
PABPC1-208ENST00000519004 NOL8Q76FK4 1167 aaKnown RBP16.18■□□□□ 0.18
PABPC1-208ENST00000519004 KNDC1Q76NI1 1749 aa16.18■□□□□ 0.18
PABPC1-208ENST00000519004 ATG3Q9NT62 314 aa16.18■□□□□ 0.18
PABPC1-208ENST00000519004 LCMT1Q9UIC8 334 aa16.18■□□□□ 0.18
PABPC1-208ENST00000519004 TXLNBQ8N3L3 684 aa16.17■□□□□ 0.18
PABPC1-208ENST00000519004 DCTPP1Q9H773 170 aa16.17■□□□□ 0.18
PABPC1-208ENST00000519004 CLGNO14967 610 aa16.17■□□□□ 0.18
PABPC1-208ENST00000519004 KRBA2Q6ZNG9 492 aa16.17■□□□□ 0.18
PABPC1-208ENST00000519004 C10orf67Q8IYJ2 551 aa16.17■□□□□ 0.18
PABPC1-208ENST00000519004 FAM200AQ8TCP9 573 aa16.17■□□□□ 0.18
PABPC1-208ENST00000519004 TARBP1Q13395 1621 aaKnown RBP16.17■□□□□ 0.18
PABPC1-208ENST00000519004 PTPRTO14522 1441 aa16.16■□□□□ 0.18
PABPC1-208ENST00000519004 MYCNP04198 464 aaPredicted RBP16.16■□□□□ 0.18
PABPC1-208ENST00000519004 NYAP1Q6ZVC0 841 aa16.16■□□□□ 0.18
PABPC1-208ENST00000519004 CACTINQ8WUQ7 758 aaKnown RBP16.16■□□□□ 0.18
PABPC1-208ENST00000519004 TRAPPC8Q9Y2L5 1435 aa16.16■□□□□ 0.18
PABPC1-208ENST00000519004 RGS12O14924 1447 aa16.15■□□□□ 0.18
PABPC1-208ENST00000519004 USP27XA6NNY8 438 aa16.15■□□□□ 0.18
PABPC1-208ENST00000519004 PNMA6AP0CW24 399 aaPredicted RBP16.15■□□□□ 0.18
PABPC1-208ENST00000519004 CCDC192P0DO97 292 aa16.15■□□□□ 0.18
PABPC1-208ENST00000519004 RNF20Q5VTR2 975 aa16.15■□□□□ 0.18
PABPC1-208ENST00000519004 PLA2G4DQ86XP0 818 aa16.15■□□□□ 0.18
PABPC1-208ENST00000519004 PDS5BQ9NTI5 1447 aa16.15■□□□□ 0.18
PABPC1-208ENST00000519004 ABCC4O15439 1325 aa16.15■□□□□ 0.18
PABPC1-208ENST00000519004 KIAA1210Q9ULL0 1709 aa16.15■□□□□ 0.18
PABPC1-208ENST00000519004 SLU7O95391 586 aaKnown RBP16.15■□□□□ 0.18
PABPC1-208ENST00000519004 MYCBPQ99417 103 aaPredicted RBP16.15■□□□□ 0.18
PABPC1-208ENST00000519004 NCAPGQ9BPX3 1015 aa16.15■□□□□ 0.18
PABPC1-208ENST00000519004 CCDC171Q6TFL3 1326 aa16.14■□□□□ 0.17
PABPC1-208ENST00000519004 USP32Q8NFA0 1604 aa16.14■□□□□ 0.17
PABPC1-208ENST00000519004 ZNF75DP51815 510 aa16.14■□□□□ 0.17
PABPC1-208ENST00000519004 LUZP1Q86V48 1076 aa16.14■□□□□ 0.17
PABPC1-208ENST00000519004 DRC7Q8IY82 874 aa16.14■□□□□ 0.17
PABPC1-208ENST00000519004 ARHGAP45Q92619 1136 aa16.14■□□□□ 0.17
PABPC1-208ENST00000519004 PALD1Q9ULE6 856 aa16.14■□□□□ 0.17
PABPC1-208ENST00000519004 PRR29P0C7W0 189 aa16.14■□□□□ 0.17
PABPC1-208ENST00000519004 CLCN6P51797 869 aa16.14■□□□□ 0.17
PABPC1-208ENST00000519004 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.14■□□□□ 0.17
PABPC1-208ENST00000519004 DHX37Q8IY37 1157 aaKnown RBP16.14■□□□□ 0.17
PABPC1-208ENST00000519004 MRPL50Q8N5N7 158 aaKnown RBP16.14■□□□□ 0.17
PABPC1-208ENST00000519004 MAST1Q9Y2H9 1570 aa16.14■□□□□ 0.17
PABPC1-208ENST00000519004 RAD50Q92878 1312 aa16.13■□□□□ 0.17
PABPC1-208ENST00000519004 ATAD2Q6PL18 1390 aa16.13■□□□□ 0.17
PABPC1-208ENST00000519004 SAMD9LQ8IVG5 1584 aa16.13■□□□□ 0.17
PABPC1-208ENST00000519004 GUCY2CP25092 1073 aa16.13■□□□□ 0.17
PABPC1-208ENST00000519004 TEX35Q5T0J7 233 aa16.13■□□□□ 0.17
PABPC1-208ENST00000519004 MRVI1Q9Y6F6 885 aa16.13■□□□□ 0.17
PABPC1-208ENST00000519004 FIBPO43427 364 aa16.13■□□□□ 0.17
PABPC1-208ENST00000519004 ZSCAN22P10073 491 aaPredicted RBP16.13■□□□□ 0.17
PABPC1-208ENST00000519004 ST5P78524 1137 aa16.13■□□□□ 0.17
PABPC1-208ENST00000519004 CCDC144BQ3MJ40 725 aa16.13■□□□□ 0.17
PABPC1-208ENST00000519004 AXDND1Q5T1B0 1012 aaPredicted RBP16.13■□□□□ 0.17
PABPC1-208ENST00000519004 CCDC144CPQ8IYA2 1237 aa16.13■□□□□ 0.17
PABPC1-208ENST00000519004 SMARCE1Q969G3 411 aa16.13■□□□□ 0.17
PABPC1-208ENST00000519004 BRMS1Q9HCU9 246 aa16.13■□□□□ 0.17
PABPC1-208ENST00000519004 LRRFIP2Q9Y608 721 aaKnown RBP16.13■□□□□ 0.17
PABPC1-208ENST00000519004 PTPN14Q15678 1187 aa16.12■□□□□ 0.17
PABPC1-208ENST00000519004 MAGI1Q96QZ7 1491 aaPredicted RBP16.12■□□□□ 0.17
PABPC1-208ENST00000519004 CCDC191Q8NCU4 936 aa16.11■□□□□ 0.17
PABPC1-208ENST00000519004 EXOC6BQ9Y2D4 811 aa16.11■□□□□ 0.17
PABPC1-208ENST00000519004 ABCA6Q8N139 1617 aa16.11■□□□□ 0.17
PABPC1-208ENST00000519004 NPHP1O15259 732 aa16.11■□□□□ 0.17
PABPC1-208ENST00000519004 APPP05067 770 aa16.11■□□□□ 0.17
PABPC1-208ENST00000519004 ZSCAN26Q16670 478 aa16.11■□□□□ 0.17
PABPC1-208ENST00000519004 SLC26A8Q96RN1 970 aa16.11■□□□□ 0.17
PABPC1-208ENST00000519004 AATKQ6ZMQ8 1374 aa16.11■□□□□ 0.17
PABPC1-208ENST00000519004 POLR3GO15318 223 aaPredicted RBP16.1■□□□□ 0.17
PABPC1-208ENST00000519004 HTATSF1O43719 755 aaKnown RBP16.1■□□□□ 0.17
PABPC1-208ENST00000519004 ZRANB2O95218 330 aaKnown RBP eCLIP16.1■□□□□ 0.17
PABPC1-208ENST00000519004 TPM4P67936 248 aa16.1■□□□□ 0.17
PABPC1-208ENST00000519004 TSGA10IPQ3SY00 556 aa16.1■□□□□ 0.17
PABPC1-208ENST00000519004 SRLQ86TD4 932 aa16.1■□□□□ 0.17
PABPC1-208ENST00000519004 ZNF428Q96B54 188 aa16.1■□□□□ 0.17
PABPC1-208ENST00000519004 ERCC6LQ2NKX8 1250 aa16.1■□□□□ 0.17
PABPC1-208ENST00000519004 TRIM5Q9C035 493 aa16.1■□□□□ 0.17
PABPC1-208ENST00000519004 CBX8Q9HC52 389 aa16.1■□□□□ 0.17
PABPC1-208ENST00000519004 KCNG1Q9UIX4 513 aa16.1■□□□□ 0.17
PABPC1-208ENST00000519004 TYRO3Q06418 890 aa16.09■□□□□ 0.17
PABPC1-208ENST00000519004 UBXN6Q9BZV1 441 aa16.09■□□□□ 0.17
PABPC1-208ENST00000519004 ANAPC15P60006 121 aa16.09■□□□□ 0.17
PABPC1-208ENST00000519004 MYO3AQ8NEV4 1616 aa16.09■□□□□ 0.17
PABPC1-208ENST00000519004 SLC12A5Q9H2X9 1139 aa16.09■□□□□ 0.17
PABPC1-208ENST00000519004 INO80Q9ULG1 1556 aaPredicted RBP16.08■□□□□ 0.17
PABPC1-208ENST00000519004 F13A1P00488 732 aa16.08■□□□□ 0.17
PABPC1-208ENST00000519004 LRRN4CLQ8ND94 238 aa16.08■□□□□ 0.17
PABPC1-208ENST00000519004 ZNF622Q969S3 477 aaKnown RBP eCLIP16.08■□□□□ 0.17
PABPC1-208ENST00000519004 IL17RAQ96F46 866 aa16.08■□□□□ 0.17
PABPC1-208ENST00000519004 CLIP2Q9UDT6 1046 aa16.08■□□□□ 0.17
PABPC1-208ENST00000519004 SBNO2Q9Y2G9 1366 aa16.08■□□□□ 0.16
PABPC1-208ENST00000519004 LRRC8AQ8IWT6 810 aa16.08■□□□□ 0.16
PABPC1-208ENST00000519004 PLEKHD1A6NEE1 506 aa16.07■□□□□ 0.16
PABPC1-208ENST00000519004 TDRD7Q8NHU6 1098 aaKnown RBP16.07■□□□□ 0.16
PABPC1-208ENST00000519004 UPF3BQ9BZI7 483 aaKnown RBP16.07■□□□□ 0.16
PABPC1-208ENST00000519004 L2HGDHQ9H9P8 463 aa16.07■□□□□ 0.16
PABPC1-208ENST00000519004 RRP15Q9Y3B9 282 aaKnown RBP16.07■□□□□ 0.16
PABPC1-208ENST00000519004 ATP10DQ9P241 1426 aa16.07■□□□□ 0.16
PABPC1-208ENST00000519004 STX6O43752 255 aa16.07■□□□□ 0.16
PABPC1-208ENST00000519004 VAMP4O75379 141 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms