RNA–Protein interactions for RNA: ENST00000518720.5

TSNARE1-202, Transcript of t-SNARE domain containing 1, humanhuman

TSL 4

Gene TSNARE1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-202ENST00000518720 KDM3BQ7LBC6 1761 aa22.45■■□□□ 1.19
TSNARE1-202ENST00000518720 NFATC2IPQ8NCF5 419 aa22.45■■□□□ 1.18
TSNARE1-202ENST00000518720 PIGBQ92521 554 aa22.45■■□□□ 1.18
TSNARE1-202ENST00000518720 BCL11BQ9C0K0 894 aaPredicted RBP22.45■■□□□ 1.18
TSNARE1-202ENST00000518720 CCDC27Q2M243 656 aa22.44■■□□□ 1.18
TSNARE1-202ENST00000518720 WWC1Q8IX03 1113 aa22.44■■□□□ 1.18
TSNARE1-202ENST00000518720 NGEFQ8N5V2 710 aa22.43■■□□□ 1.18
TSNARE1-202ENST00000518720 LAS1LQ9Y4W2 734 aaKnown RBP22.43■■□□□ 1.18
TSNARE1-202ENST00000518720 UBR2Q8IWV8 1755 aa22.42■■□□□ 1.18
TSNARE1-202ENST00000518720 CALD1Q05682 793 aaKnown RBP22.41■■□□□ 1.18
TSNARE1-202ENST00000518720 SF3B2Q13435 895 aaKnown RBP22.41■■□□□ 1.18
TSNARE1-202ENST00000518720 NCBP3Q53F19 620 aaKnown RBP22.41■■□□□ 1.18
TSNARE1-202ENST00000518720 YTHDC1Q96MU7 727 aaKnown RBP22.41■■□□□ 1.18
TSNARE1-202ENST00000518720 RGPD3A6NKT7 1758 aaPredicted RBP22.4■■□□□ 1.18
TSNARE1-202ENST00000518720 RGPD4Q7Z3J3 1758 aa22.4■■□□□ 1.18
TSNARE1-202ENST00000518720 LY75O60449 1722 aa22.4■■□□□ 1.18
TSNARE1-202ENST00000518720 BTBD11A6QL63 1104 aa22.4■■□□□ 1.18
TSNARE1-202ENST00000518720 APBA3O96018 575 aa22.39■■□□□ 1.17
TSNARE1-202ENST00000518720 SLC39A6Q13433 755 aa22.39■■□□□ 1.17
TSNARE1-202ENST00000518720 TAF7Q15545 349 aaPredicted RBP22.39■■□□□ 1.17
TSNARE1-202ENST00000518720 MIS18AQ9NYP9 233 aa22.39■■□□□ 1.17
TSNARE1-202ENST00000518720 ASAP1Q9ULH1 1129 aa22.39■■□□□ 1.17
TSNARE1-202ENST00000518720 PALLDQ8WX93 1383 aa22.38■■□□□ 1.17
TSNARE1-202ENST00000518720 TSPYL4Q9UJ04 414 aa22.38■■□□□ 1.17
TSNARE1-202ENST00000518720 TTC5Q8N0Z6 440 aa22.37■■□□□ 1.17
TSNARE1-202ENST00000518720 ATG3Q9NT62 314 aa22.37■■□□□ 1.17
TSNARE1-202ENST00000518720 KCPQ6ZWJ8 1503 aa22.36■■□□□ 1.17
TSNARE1-202ENST00000518720 SMARCC1Q92922 1105 aaPredicted RBP22.36■■□□□ 1.17
TSNARE1-202ENST00000518720 ZNF521Q96K83 1311 aa22.35■■□□□ 1.17
TSNARE1-202ENST00000518720 WDR63Q8IWG1 891 aa22.35■■□□□ 1.17
TSNARE1-202ENST00000518720 UPF1Q92900 1129 aaKnown RBP eCLIP22.35■■□□□ 1.17
TSNARE1-202ENST00000518720 IFT57Q9NWB7 429 aa22.35■■□□□ 1.17
TSNARE1-202ENST00000518720 C5P01031 1676 aa22.34■■□□□ 1.17
TSNARE1-202ENST00000518720 KCNQ3O43525 872 aa22.34■■□□□ 1.17
TSNARE1-202ENST00000518720 BAG6P46379 1132 aa22.34■■□□□ 1.17
TSNARE1-202ENST00000518720 GNAI1P63096 354 aa22.34■■□□□ 1.17
TSNARE1-202ENST00000518720 ZNF790Q6PG37 636 aa22.34■■□□□ 1.17
TSNARE1-202ENST00000518720 RBM42Q9BTD8 480 aaKnown RBP22.34■■□□□ 1.17
TSNARE1-202ENST00000518720 IL16Q14005 1332 aa22.33■■□□□ 1.17
TSNARE1-202ENST00000518720 PTCD1O75127 700 aaKnown RBP22.33■■□□□ 1.17
TSNARE1-202ENST00000518720 CFAP44Q96MT7 982 aa22.33■■□□□ 1.17
TSNARE1-202ENST00000518720 TJP1Q07157 1748 aa22.33■■□□□ 1.17
TSNARE1-202ENST00000518720 RREB1Q92766 1687 aa22.33■■□□□ 1.16
TSNARE1-202ENST00000518720 ZBED9Q6R2W3 1325 aa22.32■■□□□ 1.16
TSNARE1-202ENST00000518720 TAF1LQ8IZX4 1826 aa22.32■■□□□ 1.16
TSNARE1-202ENST00000518720 CCDC125Q86Z20 511 aa22.32■■□□□ 1.16
TSNARE1-202ENST00000518720 MBIPQ9NS73 344 aa22.32■■□□□ 1.16
TSNARE1-202ENST00000518720 LAMB4A4D0S4 1761 aa22.31■■□□□ 1.16
TSNARE1-202ENST00000518720 GOLGA2Q08379 1002 aa22.31■■□□□ 1.16
TSNARE1-202ENST00000518720 DEFB132Q7Z7B7 95 aa22.31■■□□□ 1.16
TSNARE1-202ENST00000518720 TSR2Q969E8 191 aaKnown RBP22.31■■□□□ 1.16
TSNARE1-202ENST00000518720 CHL1O00533 1208 aa22.3■■□□□ 1.16
TSNARE1-202ENST00000518720 ZNF853P0CG23 659 aa22.3■■□□□ 1.16
TSNARE1-202ENST00000518720 EN1Q05925 392 aaPredicted RBP22.3■■□□□ 1.16
TSNARE1-202ENST00000518720 BABAM1Q9NWV8 329 aa22.3■■□□□ 1.16
TSNARE1-202ENST00000518720 NUP188Q5SRE5 1749 aa22.3■■□□□ 1.16
TSNARE1-202ENST00000518720 ZNF831Q5JPB2 1677 aa22.3■■□□□ 1.16
TSNARE1-202ENST00000518720 COL5A3P25940 1745 aaPredicted RBP22.29■■□□□ 1.16
TSNARE1-202ENST00000518720 CICQ96RK0 1608 aaPredicted RBP22.29■■□□□ 1.16
TSNARE1-202ENST00000518720 ZNF496Q96IT1 587 aaPredicted RBP22.29■■□□□ 1.16
TSNARE1-202ENST00000518720 SPINK5Q9NQ38 1064 aaPredicted RBP22.29■■□□□ 1.16
TSNARE1-202ENST00000518720 CCNL1Q9UK58 526 aaPredicted RBP22.29■■□□□ 1.16
TSNARE1-202ENST00000518720 FANCIQ9NVI1 1328 aa22.29■■□□□ 1.16
TSNARE1-202ENST00000518720 LOC102724428A0A0B4J2F2 783 aa22.28■■□□□ 1.16
TSNARE1-202ENST00000518720 PLSCR1O15162 318 aa22.28■■□□□ 1.16
TSNARE1-202ENST00000518720 SIK1P57059 783 aa22.28■■□□□ 1.16
TSNARE1-202ENST00000518720 FMNL2Q96PY5 1086 aa22.28■■□□□ 1.16
TSNARE1-202ENST00000518720 KCNQ4P56696 695 aa22.27■■□□□ 1.16
TSNARE1-202ENST00000518720 EZH2Q15910 746 aaKnown RBP22.27■■□□□ 1.16
TSNARE1-202ENST00000518720 CDCA7LQ96GN5 454 aa22.27■■□□□ 1.16
TSNARE1-202ENST00000518720 MYH16Q9H6N6 1097 aa22.27■■□□□ 1.16
TSNARE1-202ENST00000518720 HEG1Q9ULI3 1381 aa22.26■■□□□ 1.15
TSNARE1-202ENST00000518720 E9PSI1 815 aa22.26■■□□□ 1.15
TSNARE1-202ENST00000518720 ATP6V1AP38606 617 aa22.26■■□□□ 1.15
TSNARE1-202ENST00000518720 EIF4A1P60842 406 aaKnown RBP22.26■■□□□ 1.15
TSNARE1-202ENST00000518720 TXNRD1Q16881 649 aa22.26■■□□□ 1.15
TSNARE1-202ENST00000518720 KRT24Q2M2I5 525 aa22.25■■□□□ 1.15
TSNARE1-202ENST00000518720 CAMKK2Q96RR4 588 aa22.25■■□□□ 1.15
TSNARE1-202ENST00000518720 SLC4A9Q96Q91 983 aa22.24■■□□□ 1.15
TSNARE1-202ENST00000518720 C4BP0C0L5 1744 aa22.23■■□□□ 1.15
TSNARE1-202ENST00000518720 SLFN5Q08AF3 891 aa22.23■■□□□ 1.15
TSNARE1-202ENST00000518720 ITPK1Q13572 414 aa22.22■■□□□ 1.15
TSNARE1-202ENST00000518720 SLC27A3Q5K4L6 730 aa22.22■■□□□ 1.15
TSNARE1-202ENST00000518720 DNAJC10Q8IXB1 793 aa22.22■■□□□ 1.15
TSNARE1-202ENST00000518720 LRRC4BQ9NT99 713 aa22.22■■□□□ 1.15
TSNARE1-202ENST00000518720 PRAMEF22A3QJZ6 481 aa22.21■■□□□ 1.15
TSNARE1-202ENST00000518720 PROM2Q8N271 834 aa22.21■■□□□ 1.15
TSNARE1-202ENST00000518720 MYH14Q7Z406 1995 aaKnown RBP22.2■■□□□ 1.14
TSNARE1-202ENST00000518720 SNRPA1P09661 255 aaKnown RBP22.2■■□□□ 1.14
TSNARE1-202ENST00000518720 VSIG10Q8N0Z9 540 aa22.2■■□□□ 1.14
TSNARE1-202ENST00000518720 TUBGCP6Q96RT7 1819 aa22.2■■□□□ 1.14
TSNARE1-202ENST00000518720 ELL2O00472 640 aaPredicted RBP22.19■■□□□ 1.14
TSNARE1-202ENST00000518720 GIGYF1O75420 1035 aaPredicted RBP22.19■■□□□ 1.14
TSNARE1-202ENST00000518720 EXOSC9Q06265 439 aaKnown RBP22.19■■□□□ 1.14
TSNARE1-202ENST00000518720 LINC00116Q8NCU8 138 aa22.19■■□□□ 1.14
TSNARE1-202ENST00000518720 DUSP27Q5VZP5 1158 aa22.18■■□□□ 1.14
TSNARE1-202ENST00000518720 C8orf58Q8NAV2 365 aa22.18■■□□□ 1.14
TSNARE1-202ENST00000518720 UBR3Q6ZT12 1888 aa22.16■■□□□ 1.14
TSNARE1-202ENST00000518720 TSPYL6Q8N831 410 aa22.16■■□□□ 1.14
TSNARE1-202ENST00000518720 EIF2S2P20042 333 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms