RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 CHD4Q14839 1912 aa10.29□□□□□ -0.76
PVT1-206ENST00000517838 NSD2O96028 1365 aa10.28□□□□□ -0.76
PVT1-206ENST00000517838 HSPA6P17066 643 aa10.28□□□□□ -0.76
PVT1-206ENST00000517838 MSL1Q68DK7 614 aa10.28□□□□□ -0.76
PVT1-206ENST00000517838 GPBP1L1Q9HC44 474 aaPredicted RBP10.28□□□□□ -0.76
PVT1-206ENST00000517838 CCNL1Q9UK58 526 aaPredicted RBP10.28□□□□□ -0.76
PVT1-206ENST00000517838 QRICH2Q9H0J4 1663 aa10.28□□□□□ -0.76
PVT1-206ENST00000517838 ANKRD36BQ8N2N9 1353 aa10.27□□□□□ -0.76
PVT1-206ENST00000517838 IER5LQ5T953 404 aa10.27□□□□□ -0.77
PVT1-206ENST00000517838 LTV1Q96GA3 475 aaPredicted RBP10.27□□□□□ -0.77
PVT1-206ENST00000517838 YTHDC1Q96MU7 727 aaKnown RBP10.27□□□□□ -0.77
PVT1-206ENST00000517838 SLC12A5Q9H2X9 1139 aa10.27□□□□□ -0.77
PVT1-206ENST00000517838 CD2APQ9Y5K6 639 aa10.27□□□□□ -0.77
PVT1-206ENST00000517838 CD163L1Q9NR16 1453 aa10.27□□□□□ -0.77
PVT1-206ENST00000517838 RGPD5Q99666 1765 aa10.26□□□□□ -0.77
PVT1-206ENST00000517838 ZCRB1Q8TBF4 217 aaKnown RBP10.26□□□□□ -0.77
PVT1-206ENST00000517838 TMC1Q8TDI8 760 aa10.26□□□□□ -0.77
PVT1-206ENST00000517838 ZNF526Q8TF50 670 aaPredicted RBP10.26□□□□□ -0.77
PVT1-206ENST00000517838 BTAF1O14981 1849 aa10.26□□□□□ -0.77
PVT1-206ENST00000517838 ADCY9O60503 1353 aa10.26□□□□□ -0.77
PVT1-206ENST00000517838 ROCK2O75116 1388 aaKnown RBP10.26□□□□□ -0.77
PVT1-206ENST00000517838 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.24□□□□□ -0.77
PVT1-206ENST00000517838 POTEFA5A3E0 1075 aa10.24□□□□□ -0.77
PVT1-206ENST00000517838 FBLN1P23142 703 aa10.24□□□□□ -0.77
PVT1-206ENST00000517838 HDGFL2Q7Z4V5 671 aaPredicted RBP10.24□□□□□ -0.77
PVT1-206ENST00000517838 ZFP91Q96JP5 570 aaPredicted RBP10.24□□□□□ -0.77
PVT1-206ENST00000517838 COL24A1Q17RW2 1714 aa10.24□□□□□ -0.77
PVT1-206ENST00000517838 HOXC9P31274 260 aa10.23□□□□□ -0.77
PVT1-206ENST00000517838 MAP3K19Q56UN5 1328 aa10.23□□□□□ -0.77
PVT1-206ENST00000517838 USP47Q96K76 1375 aa10.23□□□□□ -0.77
PVT1-206ENST00000517838 KIF3CO14782 793 aa10.22□□□□□ -0.77
PVT1-206ENST00000517838 SMIM5Q71RC9 77 aa10.22□□□□□ -0.77
PVT1-206ENST00000517838 AMIGO3Q86WK7 504 aa10.22□□□□□ -0.77
PVT1-206ENST00000517838 WWC3Q9ULE0 1092 aa10.22□□□□□ -0.77
PVT1-206ENST00000517838 EDC4Q6P2E9 1401 aaKnown RBP10.22□□□□□ -0.77
PVT1-206ENST00000517838 IRX5P78411 483 aaPredicted RBP10.21□□□□□ -0.77
PVT1-206ENST00000517838 NBPF6Q5VWK0 638 aa10.21□□□□□ -0.77
PVT1-206ENST00000517838 FLAD1Q8NFF5 587 aa10.21□□□□□ -0.77
PVT1-206ENST00000517838 NBPF4Q96M43 638 aa10.21□□□□□ -0.77
PVT1-206ENST00000517838 TERF2IPQ9NYB0 399 aa10.21□□□□□ -0.77
PVT1-206ENST00000517838 TAOK2Q9UL54 1235 aa10.21□□□□□ -0.77
PVT1-206ENST00000517838 COLQQ9Y215 455 aaPredicted RBP10.21□□□□□ -0.77
PVT1-206ENST00000517838 A0A1W2PP64 1363 aa10.21□□□□□ -0.78
PVT1-206ENST00000517838 POTEB2H3BUK9 544 aa10.2□□□□□ -0.78
PVT1-206ENST00000517838 MEGF6O75095 1541 aa10.2□□□□□ -0.78
PVT1-206ENST00000517838 AMPHP49418 695 aa10.2□□□□□ -0.78
PVT1-206ENST00000517838 QSER1Q2KHR3 1735 aa10.2□□□□□ -0.78
PVT1-206ENST00000517838 LHX8Q68G74 356 aa10.2□□□□□ -0.78
PVT1-206ENST00000517838 IGSF1Q8N6C5 1336 aa10.2□□□□□ -0.78
PVT1-206ENST00000517838 USHBP1Q8N6Y0 703 aa10.2□□□□□ -0.78
PVT1-206ENST00000517838 DNAJC5GQ8N7S2 189 aa10.2□□□□□ -0.78
PVT1-206ENST00000517838 AMER1Q5JTC6 1135 aaPredicted RBP10.19□□□□□ -0.78
PVT1-206ENST00000517838 COG3Q96JB2 828 aa10.19□□□□□ -0.78
PVT1-206ENST00000517838 PALLDQ8WX93 1383 aa10.18□□□□□ -0.78
PVT1-206ENST00000517838 CGNL1Q0VF96 1302 aa10.18□□□□□ -0.78
PVT1-206ENST00000517838 MPRIPQ6WCQ1 1025 aa10.18□□□□□ -0.78
PVT1-206ENST00000517838 PUS7Q96PZ0 661 aaKnown RBP10.18□□□□□ -0.78
PVT1-206ENST00000517838 CARD11Q9BXL7 1154 aa10.18□□□□□ -0.78
PVT1-206ENST00000517838 MON2Q7Z3U7 1717 aa10.18□□□□□ -0.78
PVT1-206ENST00000517838 USP54Q70EL1 1684 aa10.18□□□□□ -0.78
PVT1-206ENST00000517838 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.17□□□□□ -0.78
PVT1-206ENST00000517838 CYP27B1O15528 508 aa10.17□□□□□ -0.78
PVT1-206ENST00000517838 PHF14O94880 888 aa10.17□□□□□ -0.78
PVT1-206ENST00000517838 HMGB2P26583 209 aaKnown RBP10.17□□□□□ -0.78
PVT1-206ENST00000517838 APLP1P51693 650 aa10.17□□□□□ -0.78
PVT1-206ENST00000517838 DDX10Q13206 875 aaKnown RBP10.17□□□□□ -0.78
PVT1-206ENST00000517838 RRS1Q15050 365 aaKnown RBP10.17□□□□□ -0.78
PVT1-206ENST00000517838 RAPGEF4Q8WZA2 1011 aa10.17□□□□□ -0.78
PVT1-206ENST00000517838 RTN4Q9NQC3 1192 aaKnown RBP10.17□□□□□ -0.78
PVT1-206ENST00000517838 GOLGA2Q08379 1002 aa10.16□□□□□ -0.78
PVT1-206ENST00000517838 MKRN3Q13064 507 aaKnown RBP10.16□□□□□ -0.78
PVT1-206ENST00000517838 AK7Q96M32 723 aa10.16□□□□□ -0.78
PVT1-206ENST00000517838 TUBGCP6Q96RT7 1819 aa10.16□□□□□ -0.78
PVT1-206ENST00000517838 LY75O60449 1722 aa10.16□□□□□ -0.78
PVT1-206ENST00000517838 TOMM70O94826 608 aa10.15□□□□□ -0.78
PVT1-206ENST00000517838 SEC24BO95487 1268 aa10.15□□□□□ -0.78
PVT1-206ENST00000517838 TATP17735 454 aaPredicted RBP10.15□□□□□ -0.78
PVT1-206ENST00000517838 PIGBQ92521 554 aa10.15□□□□□ -0.78
PVT1-206ENST00000517838 SMARCC1Q92922 1105 aaPredicted RBP10.15□□□□□ -0.78
PVT1-206ENST00000517838 LTN1O94822 1766 aa10.14□□□□□ -0.79
PVT1-206ENST00000517838 STK25O00506 426 aa10.14□□□□□ -0.79
PVT1-206ENST00000517838 FYB1O15117 783 aa10.14□□□□□ -0.79
PVT1-206ENST00000517838 POTEJP0CG39 1038 aa10.14□□□□□ -0.79
PVT1-206ENST00000517838 SSFA2P28290 1259 aa10.14□□□□□ -0.79
PVT1-206ENST00000517838 EIF4G2P78344 907 aaKnown RBP eCLIP10.14□□□□□ -0.796e-8■■■■□ 19.3
PVT1-206ENST00000517838 HSP90AB2PQ58FF8 381 aa10.14□□□□□ -0.79
PVT1-206ENST00000517838 EFCAB3Q8N7B9 438 aa10.14□□□□□ -0.79
PVT1-206ENST00000517838 PDCD7Q8N8D1 485 aaKnown RBP10.14□□□□□ -0.79
PVT1-206ENST00000517838 LINC00116Q8NCU8 138 aa10.14□□□□□ -0.79
PVT1-206ENST00000517838 OCEL1Q9H607 264 aa10.14□□□□□ -0.79
PVT1-206ENST00000517838 FAM208AQ9UK61 1670 aaKnown RBP10.14□□□□□ -0.79
PVT1-206ENST00000517838 DOT1LQ8TEK3 1739 aa10.13□□□□□ -0.79
PVT1-206ENST00000517838 PCDH11XQ9BZA7 1347 aa10.13□□□□□ -0.79
PVT1-206ENST00000517838 PCDH11YQ9BZA8 1340 aa10.13□□□□□ -0.79
PVT1-206ENST00000517838 PLCG2P16885 1265 aa10.13□□□□□ -0.79
PVT1-206ENST00000517838 TESK2Q96S53 571 aa10.13□□□□□ -0.79
PVT1-206ENST00000517838 GGNBP2Q9H3C7 697 aa10.13□□□□□ -0.79
PVT1-206ENST00000517838 NMRK2Q9NPI5 230 aa10.13□□□□□ -0.79
PVT1-206ENST00000517838 RTL1A6NKG5 1358 aa10.13□□□□□ -0.79
PVT1-206ENST00000517838 KAT6BQ8WYB5 2073 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms