RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 DDX27Q96GQ7 796 aaKnown RBP1.12□□□□□ -2.23
SNORA40.16-201ENST00000517238 ZSCAN10Q96SZ4 725 aaPredicted RBP1.12□□□□□ -2.23
SNORA40.16-201ENST00000517238 MYRFQ9Y2G1 1151 aa1.12□□□□□ -2.23
SNORA40.16-201ENST00000517238 EMILIN1Q9Y6C2 1016 aa1.12□□□□□ -2.23
SNORA40.16-201ENST00000517238 CNTNAP4Q9C0A0 1308 aa1.12□□□□□ -2.23
SNORA40.16-201ENST00000517238 C2CD2LO14523 706 aa1.11□□□□□ -2.23
SNORA40.16-201ENST00000517238 CELA3BP08861 270 aa1.11□□□□□ -2.23
SNORA40.16-201ENST00000517238 ARAFP10398 606 aa1.11□□□□□ -2.23
SNORA40.16-201ENST00000517238 FSHRP23945 695 aa1.11□□□□□ -2.23
SNORA40.16-201ENST00000517238 PDE4AP27815 886 aa1.11□□□□□ -2.23
SNORA40.16-201ENST00000517238 Q3C1V9 767 aa1.11□□□□□ -2.23
SNORA40.16-201ENST00000517238 LRCH2Q5VUJ6 765 aa1.11□□□□□ -2.23
SNORA40.16-201ENST00000517238 PRICKLE2Q7Z3G6 844 aa1.11□□□□□ -2.23
SNORA40.16-201ENST00000517238 ZNF511Q8NB15 262 aa1.11□□□□□ -2.23
SNORA40.16-201ENST00000517238 BAP1Q92560 729 aa1.11□□□□□ -2.23
SNORA40.16-201ENST00000517238 PPP1R16BQ96T49 567 aa1.11□□□□□ -2.23
SNORA40.16-201ENST00000517238 USB1Q9BQ65 265 aaKnown RBP1.11□□□□□ -2.23
SNORA40.16-201ENST00000517238 NUDT12Q9BQG2 462 aa1.11□□□□□ -2.23
SNORA40.16-201ENST00000517238 BRIP1Q9BX63 1249 aa1.11□□□□□ -2.23
SNORA40.16-201ENST00000517238 PARD6AQ9NPB6 346 aa1.11□□□□□ -2.23
SNORA40.16-201ENST00000517238 RCCD1A6NED2 376 aa1.1□□□□□ -2.23
SNORA40.16-201ENST00000517238 GRM5P41594 1212 aa1.1□□□□□ -2.23
SNORA40.16-201ENST00000517238 Q6ZVU0 165 aa1.1□□□□□ -2.23
SNORA40.16-201ENST00000517238 RBM46Q8TBY0 533 aaKnown RBP1.1□□□□□ -2.23
SNORA40.16-201ENST00000517238 FAM168AQ92567 244 aa1.1□□□□□ -2.23
SNORA40.16-201ENST00000517238 AGBL1Q96MI9 1066 aa1.1□□□□□ -2.23
SNORA40.16-201ENST00000517238 ZCCHC4Q9H5U6 513 aa1.1□□□□□ -2.23
SNORA40.16-201ENST00000517238 DYRK1BQ9Y463 629 aa1.1□□□□□ -2.23
SNORA40.16-201ENST00000517238 NCKAP5LQ9HCH0 1330 aa1.1□□□□□ -2.23
SNORA40.16-201ENST00000517238 LILRB3O75022 631 aa1.09□□□□□ -2.23
SNORA40.16-201ENST00000517238 ADH6P28332 368 aa1.09□□□□□ -2.23
SNORA40.16-201ENST00000517238 IREB2P48200 963 aaKnown RBP1.09□□□□□ -2.23
SNORA40.16-201ENST00000517238 FOXD4L5Q5VV16 416 aaPredicted RBP1.09□□□□□ -2.23
SNORA40.16-201ENST00000517238 ERICH6BQ5W0A0 696 aa1.09□□□□□ -2.23
SNORA40.16-201ENST00000517238 TMEM40Q8WWA1 233 aa1.09□□□□□ -2.23
SNORA40.16-201ENST00000517238 FBXL18Q96ME1 805 aa1.09□□□□□ -2.23
SNORA40.16-201ENST00000517238 ZNF395Q9H8N7 513 aaPredicted RBP1.09□□□□□ -2.23
SNORA40.16-201ENST00000517238 LRRC10BA6NIK2 292 aa1.08□□□□□ -2.24
SNORA40.16-201ENST00000517238 DPYSL4O14531 572 aa1.08□□□□□ -2.24
SNORA40.16-201ENST00000517238 COL19A1Q14993 1142 aa1.08□□□□□ -2.24
SNORA40.16-201ENST00000517238 TRAPPC3LQ5T215 181 aa1.08□□□□□ -2.24
SNORA40.16-201ENST00000517238 CDCP2Q5VXM1 449 aa1.08□□□□□ -2.24
SNORA40.16-201ENST00000517238 MSL1Q68DK7 614 aa1.08□□□□□ -2.24
SNORA40.16-201ENST00000517238 XKR5Q6UX68 686 aa1.08□□□□□ -2.24
SNORA40.16-201ENST00000517238 ZNF575Q86XF7 245 aa1.08□□□□□ -2.24
SNORA40.16-201ENST00000517238 CCDC116Q8IYX3 515 aa1.08□□□□□ -2.24
SNORA40.16-201ENST00000517238 CXorf38Q8TB03 319 aa1.08□□□□□ -2.24
SNORA40.16-201ENST00000517238 WFDC12Q8WWY7 111 aa1.08□□□□□ -2.24
SNORA40.16-201ENST00000517238 MEGF10Q96KG7 1140 aa1.08□□□□□ -2.24
SNORA40.16-201ENST00000517238 GPR20Q99678 358 aa1.08□□□□□ -2.24
SNORA40.16-201ENST00000517238 LARP6Q9BRS8 491 aaKnown RBP1.08□□□□□ -2.24
SNORA40.16-201ENST00000517238 UNC93B1Q9H1C4 597 aa1.08□□□□□ -2.24
SNORA40.16-201ENST00000517238 PITPNM2Q9BZ72 1349 aa1.08□□□□□ -2.24
SNORA40.16-201ENST00000517238 ITGB6P18564 788 aa1.07□□□□□ -2.24
SNORA40.16-201ENST00000517238 FGFR3P22607 806 aa1.07□□□□□ -2.24
SNORA40.16-201ENST00000517238 PRIM1P49642 420 aaKnown RBP1.07□□□□□ -2.24
SNORA40.16-201ENST00000517238 VASPP50552 380 aaPredicted RBP1.07□□□□□ -2.24
SNORA40.16-201ENST00000517238 CTBSQ01459 385 aa1.07□□□□□ -2.24
SNORA40.16-201ENST00000517238 SPATS1Q496A3 300 aa1.07□□□□□ -2.24
SNORA40.16-201ENST00000517238 FCHSD1Q86WN1 690 aa1.07□□□□□ -2.24
SNORA40.16-201ENST00000517238 RDH13Q8NBN7 331 aa1.07□□□□□ -2.24
SNORA40.16-201ENST00000517238 SCAND2PQ9GZW5 306 aaPredicted RBP1.07□□□□□ -2.24
SNORA40.16-201ENST00000517238 PGPEP1Q9NXJ5 209 aa1.07□□□□□ -2.24
SNORA40.16-201ENST00000517238 SALL3Q9BXA9 1300 aa1.07□□□□□ -2.24
SNORA40.16-201ENST00000517238 NPIPB6E9PJ23 425 aa1.06□□□□□ -2.24
SNORA40.16-201ENST00000517238 M0R082 166 aa1.06□□□□□ -2.24
SNORA40.16-201ENST00000517238 JUNDP17535 347 aa1.06□□□□□ -2.24
SNORA40.16-201ENST00000517238 TNFRSF1AP19438 455 aa1.06□□□□□ -2.24
SNORA40.16-201ENST00000517238 NOS3P29474 1203 aa1.06□□□□□ -2.24
SNORA40.16-201ENST00000517238 RAC1P63000 192 aa1.06□□□□□ -2.24
SNORA40.16-201ENST00000517238 CIAPIN1Q6FI81 312 aa1.06□□□□□ -2.24
SNORA40.16-201ENST00000517238 ZNF417Q8TAU3 575 aa1.06□□□□□ -2.24
SNORA40.16-201ENST00000517238 ZNF587Q96SQ5 575 aaPredicted RBP1.06□□□□□ -2.24
SNORA40.16-201ENST00000517238 CCDC39Q9UFE4 941 aa1.06□□□□□ -2.24
SNORA40.16-201ENST00000517238 FBXO3Q9UK99 471 aa1.06□□□□□ -2.24
SNORA40.16-201ENST00000517238 ATXN7L1Q9ULK2 861 aaPredicted RBP1.06□□□□□ -2.24
SNORA40.16-201ENST00000517238 NOTCH2Q04721 2471 aa1.06□□□□□ -2.24
SNORA40.16-201ENST00000517238 A0A0A0MRY4 1105 aa1.05□□□□□ -2.24
SNORA40.16-201ENST00000517238 PRR19A6NJB7 356 aa1.05□□□□□ -2.24
SNORA40.16-201ENST00000517238 SLPIP03973 132 aa1.05□□□□□ -2.24
SNORA40.16-201ENST00000517238 ERBB2P04626 1255 aa1.05□□□□□ -2.24
SNORA40.16-201ENST00000517238 C1QTNF9P0C862 333 aa1.05□□□□□ -2.24
SNORA40.16-201ENST00000517238 BMP7P18075 431 aa1.05□□□□□ -2.24
SNORA40.16-201ENST00000517238 GRIPAP1Q4V328 841 aa1.05□□□□□ -2.24
SNORA40.16-201ENST00000517238 AGBL5Q8NDL9 886 aa1.05□□□□□ -2.24
SNORA40.16-201ENST00000517238 ABHD17AQ96GS6 310 aa1.05□□□□□ -2.24
SNORA40.16-201ENST00000517238 RTEL1Q9NZ71 1219 aa1.05□□□□□ -2.24
SNORA40.16-201ENST00000517238 RAXQ9Y2V3 346 aa1.05□□□□□ -2.24
SNORA40.16-201ENST00000517238 CYSRT1A8MQ03 144 aa1.04□□□□□ -2.24
SNORA40.16-201ENST00000517238 NFIBO00712 420 aa1.04□□□□□ -2.24
SNORA40.16-201ENST00000517238 ALAS2P22557 587 aa1.04□□□□□ -2.24
SNORA40.16-201ENST00000517238 GDF5P43026 501 aa1.04□□□□□ -2.24
SNORA40.16-201ENST00000517238 NFIAQ12857 509 aa1.04□□□□□ -2.24
SNORA40.16-201ENST00000517238 PPP1R26Q5T8A7 1209 aaPredicted RBP1.04□□□□□ -2.24
SNORA40.16-201ENST00000517238 SYDE1Q6ZW31 735 aaPredicted RBP1.04□□□□□ -2.24
SNORA40.16-201ENST00000517238 GLCCI1Q86VQ1 547 aa1.04□□□□□ -2.24
SNORA40.16-201ENST00000517238 VSIG10LQ86VR7 867 aa1.04□□□□□ -2.24
SNORA40.16-201ENST00000517238 ZFPM1Q8IX07 1006 aa1.04□□□□□ -2.24
SNORA40.16-201ENST00000517238 HMCN1Q96RW7 5635 aa1.04□□□□□ -2.24
SNORA40.16-201ENST00000517238 PCSK5Q92824 1860 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms