RNA–Protein interactions for RNA: ENST00000516483.1

RN7SKP238-201, Transcript of RNA, 7SK small nuclear pseudogene 238, humanhuman

BASIC

Gene RN7SKP238, Length 249 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP238-201ENST00000516483 SMARCC1Q92922 1105 aaPredicted RBP8.25□□□□□ -1.09
RN7SKP238-201ENST00000516483 ATG3Q9NT62 314 aa8.25□□□□□ -1.09
RN7SKP238-201ENST00000516483 C4BP0C0L5 1744 aa8.25□□□□□ -1.09
RN7SKP238-201ENST00000516483 TAF1LQ8IZX4 1826 aa8.24□□□□□ -1.09
RN7SKP238-201ENST00000516483 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.24□□□□□ -1.09
RN7SKP238-201ENST00000516483 PER1O15534 1290 aaPredicted RBP8.24□□□□□ -1.09
RN7SKP238-201ENST00000516483 GPR162Q16538 588 aa8.24□□□□□ -1.09
RN7SKP238-201ENST00000516483 DIAPH1O60610 1272 aaKnown RBP8.23□□□□□ -1.09
RN7SKP238-201ENST00000516483 DCAF5Q96JK2 942 aa8.23□□□□□ -1.09
RN7SKP238-201ENST00000516483 SLC4A9Q96Q91 983 aa8.23□□□□□ -1.09
RN7SKP238-201ENST00000516483 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.23□□□□□ -1.09
RN7SKP238-201ENST00000516483 QSER1Q2KHR3 1735 aa8.23□□□□□ -1.09
RN7SKP238-201ENST00000516483 SLC39A6Q13433 755 aa8.22□□□□□ -1.09
RN7SKP238-201ENST00000516483 AMOTQ4VCS5 1084 aa8.22□□□□□ -1.09
RN7SKP238-201ENST00000516483 NFATC2IPQ8NCF5 419 aa8.22□□□□□ -1.09
RN7SKP238-201ENST00000516483 LGR6Q9HBX8 967 aa8.22□□□□□ -1.09
RN7SKP238-201ENST00000516483 UBR3Q6ZT12 1888 aa8.21□□□□□ -1.09
RN7SKP238-201ENST00000516483 HSP90AB1P08238 724 aaKnown RBP8.21□□□□□ -1.1
RN7SKP238-201ENST00000516483 SLC16A10Q8TF71 515 aa8.21□□□□□ -1.1
RN7SKP238-201ENST00000516483 KDRP35968 1356 aa8.21□□□□□ -1.1
RN7SKP238-201ENST00000516483 ERVV-2B6SEH9 535 aa8.2□□□□□ -1.1
RN7SKP238-201ENST00000516483 MTHFSDQ2M296 383 aaKnown RBP8.2□□□□□ -1.1
RN7SKP238-201ENST00000516483 COL3A1P02461 1466 aaPredicted RBP8.19□□□□□ -1.1
RN7SKP238-201ENST00000516483 RNMTO43148 476 aaKnown RBP8.19□□□□□ -1.1
RN7SKP238-201ENST00000516483 YBX3P16989 372 aaKnown RBP eCLIP8.19□□□□□ -1.1
RN7SKP238-201ENST00000516483 SSFA2P28290 1259 aa8.19□□□□□ -1.1
RN7SKP238-201ENST00000516483 AKAP4Q5JQC9 854 aa8.19□□□□□ -1.1
RN7SKP238-201ENST00000516483 SRP68Q9UHB9 627 aaKnown RBP8.19□□□□□ -1.1
RN7SKP238-201ENST00000516483 RTCBQ9Y3I0 505 aaKnown RBP8.19□□□□□ -1.1
RN7SKP238-201ENST00000516483 SCN11AQ9UI33 1791 aa8.18□□□□□ -1.1
RN7SKP238-201ENST00000516483 MMP10P09238 476 aa8.18□□□□□ -1.1
RN7SKP238-201ENST00000516483 PRKAR2BP31323 418 aa8.18□□□□□ -1.1
RN7SKP238-201ENST00000516483 CRKLP46109 303 aaKnown RBP8.18□□□□□ -1.1
RN7SKP238-201ENST00000516483 DNAJC10Q8IXB1 793 aa8.18□□□□□ -1.1
RN7SKP238-201ENST00000516483 FLAD1Q8NFF5 587 aa8.18□□□□□ -1.1
RN7SKP238-201ENST00000516483 SLC52A2Q9HAB3 445 aa8.18□□□□□ -1.1
RN7SKP238-201ENST00000516483 ZNF330Q9Y3S2 320 aaPredicted RBP8.18□□□□□ -1.1
RN7SKP238-201ENST00000516483 VIRMAQ69YN4 1812 aaKnown RBP8.17□□□□□ -1.1
RN7SKP238-201ENST00000516483 MYH14Q7Z406 1995 aaKnown RBP8.17□□□□□ -1.1
RN7SKP238-201ENST00000516483 U2AF1L5P0DN76 240 aaPredicted RBP8.17□□□□□ -1.1
RN7SKP238-201ENST00000516483 PPP2R1AP30153 589 aa8.17□□□□□ -1.1
RN7SKP238-201ENST00000516483 RFC4P35249 363 aa8.17□□□□□ -1.1
RN7SKP238-201ENST00000516483 U2AF1Q01081 240 aaKnown RBP eCLIP8.17□□□□□ -1.1
RN7SKP238-201ENST00000516483 TRAPPC3LQ5T215 181 aa8.17□□□□□ -1.1
RN7SKP238-201ENST00000516483 ARHGEF1Q92888 912 aaKnown RBP8.17□□□□□ -1.1
RN7SKP238-201ENST00000516483 PHACTR3Q96KR7 559 aa8.17□□□□□ -1.1
RN7SKP238-201ENST00000516483 CFAP53Q96M91 514 aa8.17□□□□□ -1.1
RN7SKP238-201ENST00000516483 MAP3K5Q99683 1374 aa8.17□□□□□ -1.1
RN7SKP238-201ENST00000516483 CICQ96RK0 1608 aaPredicted RBP8.17□□□□□ -1.1
RN7SKP238-201ENST00000516483 COL5A3P25940 1745 aaPredicted RBP8.17□□□□□ -1.1
RN7SKP238-201ENST00000516483 TJP1Q07157 1748 aa8.16□□□□□ -1.1
RN7SKP238-201ENST00000516483 COL24A1Q17RW2 1714 aa8.16□□□□□ -1.1
RN7SKP238-201ENST00000516483 ZNF784Q8NCA9 323 aaPredicted RBP8.16□□□□□ -1.1
RN7SKP238-201ENST00000516483 C4AP0C0L4 1744 aa8.15□□□□□ -1.1
RN7SKP238-201ENST00000516483 NPC1L1Q9UHC9 1359 aa8.15□□□□□ -1.1
RN7SKP238-201ENST00000516483 CNTNAP4Q9C0A0 1308 aa8.15□□□□□ -1.1
RN7SKP238-201ENST00000516483 TEFQ10587 303 aa8.15□□□□□ -1.1
RN7SKP238-201ENST00000516483 DCTN1Q14203 1278 aa8.15□□□□□ -1.1
RN7SKP238-201ENST00000516483 MCM10Q7L590 875 aa8.15□□□□□ -1.1
RN7SKP238-201ENST00000516483 ZNF526Q8TF50 670 aaPredicted RBP8.15□□□□□ -1.1
RN7SKP238-201ENST00000516483 KCPQ6ZWJ8 1503 aa8.14□□□□□ -1.11
RN7SKP238-201ENST00000516483 MRC1P22897 1456 aa8.14□□□□□ -1.11
RN7SKP238-201ENST00000516483 PLEKHG2Q9H7P9 1386 aa8.14□□□□□ -1.11
RN7SKP238-201ENST00000516483 CHD4Q14839 1912 aa8.14□□□□□ -1.11
RN7SKP238-201ENST00000516483 GNAT3A8MTJ3 354 aa8.14□□□□□ -1.11
RN7SKP238-201ENST00000516483 KCNQ3O43525 872 aa8.14□□□□□ -1.11
RN7SKP238-201ENST00000516483 RPS6KA4O75676 772 aa8.14□□□□□ -1.11
RN7SKP238-201ENST00000516483 GYS1P13807 737 aa8.14□□□□□ -1.11
RN7SKP238-201ENST00000516483 CANXP27824 592 aaKnown RBP8.14□□□□□ -1.11
RN7SKP238-201ENST00000516483 PIP4K2AP48426 406 aaPredicted RBP8.14□□□□□ -1.11
RN7SKP238-201ENST00000516483 FKBP8Q14318 412 aa8.14□□□□□ -1.11
RN7SKP238-201ENST00000516483 INTS5Q6P9B9 1019 aaKnown RBP8.14□□□□□ -1.11
RN7SKP238-201ENST00000516483 TTC5Q8N0Z6 440 aa8.14□□□□□ -1.11
RN7SKP238-201ENST00000516483 IL17REQ8NFR9 667 aa8.14□□□□□ -1.11
RN7SKP238-201ENST00000516483 GAS2L2Q8NHY3 880 aa8.14□□□□□ -1.11
RN7SKP238-201ENST00000516483 RSPH6AQ9H0K4 717 aa8.14□□□□□ -1.11
RN7SKP238-201ENST00000516483 CCDC87Q9NVE4 849 aa8.14□□□□□ -1.11
RN7SKP238-201ENST00000516483 ZBTB1Q9Y2K1 713 aa8.14□□□□□ -1.11
RN7SKP238-201ENST00000516483 CD2APQ9Y5K6 639 aa8.14□□□□□ -1.11
RN7SKP238-201ENST00000516483 N4BP2Q86UW6 1770 aaPredicted RBP8.13□□□□□ -1.11
RN7SKP238-201ENST00000516483 A0A0G2JLW4 131 aa8.13□□□□□ -1.11
RN7SKP238-201ENST00000516483 DDX10Q13206 875 aaKnown RBP8.13□□□□□ -1.11
RN7SKP238-201ENST00000516483 RC3H1Q5TC82 1133 aaKnown RBP8.13□□□□□ -1.11
RN7SKP238-201ENST00000516483 USPL1Q5W0Q7 1092 aa8.13□□□□□ -1.11
RN7SKP238-201ENST00000516483 BICDL1Q6ZP65 573 aa8.13□□□□□ -1.11
RN7SKP238-201ENST00000516483 ZNF496Q96IT1 587 aaPredicted RBP8.13□□□□□ -1.11
RN7SKP238-201ENST00000516483 NUDCQ9Y266 331 aa8.13□□□□□ -1.11
RN7SKP238-201ENST00000516483 BCS1LQ9Y276 419 aa8.13□□□□□ -1.11
RN7SKP238-201ENST00000516483 PARP3Q9Y6F1 533 aa8.13□□□□□ -1.11
RN7SKP238-201ENST00000516483 USP42Q9H9J4 1324 aaKnown RBP8.12□□□□□ -1.11
RN7SKP238-201ENST00000516483 ZPR1O75312 459 aa8.12□□□□□ -1.11
RN7SKP238-201ENST00000516483 CYP19A1P11511 503 aaPredicted RBP8.12□□□□□ -1.11
RN7SKP238-201ENST00000516483 HMGB2P26583 209 aaKnown RBP8.12□□□□□ -1.11
RN7SKP238-201ENST00000516483 DDR1Q08345 913 aa8.12□□□□□ -1.11
RN7SKP238-201ENST00000516483 MIS18AQ9NYP9 233 aa8.12□□□□□ -1.11
RN7SKP238-201ENST00000516483 PXDNLA1KZ92 1463 aa8.12□□□□□ -1.11
RN7SKP238-201ENST00000516483 COL15A1P39059 1388 aa8.11□□□□□ -1.11
RN7SKP238-201ENST00000516483 SOS1Q07889 1333 aaPredicted RBP8.11□□□□□ -1.11
RN7SKP238-201ENST00000516483 PRAMEF22A3QJZ6 481 aa8.11□□□□□ -1.11
RN7SKP238-201ENST00000516483 BTBD11A6QL63 1104 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms