RNA–Protein interactions for RNA: ENST00000515982.1

SCARNA6-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 265 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6-201ENST00000515982 SENP3-EIF4A1A0A087X0R7 540 aa9.21□□□□□ -0.94
SCARNA6-201ENST00000515982 GNAI1P63096 354 aa9.21□□□□□ -0.94
SCARNA6-201ENST00000515982 GOLGA2Q08379 1002 aa9.21□□□□□ -0.94
SCARNA6-201ENST00000515982 NFATC2IPQ8NCF5 419 aa9.21□□□□□ -0.94
SCARNA6-201ENST00000515982 SYTL4Q96C24 671 aaPredicted RBP9.21□□□□□ -0.94
SCARNA6-201ENST00000515982 SHANK3Q9BYB0 1731 aa9.21□□□□□ -0.94
SCARNA6-201ENST00000515982 ZBED9Q6R2W3 1325 aa9.21□□□□□ -0.94
SCARNA6-201ENST00000515982 SCN11AQ9UI33 1791 aa9.2□□□□□ -0.94
SCARNA6-201ENST00000515982 BTBD11A6QL63 1104 aa9.2□□□□□ -0.94
SCARNA6-201ENST00000515982 ACSBG1Q96GR2 724 aa9.2□□□□□ -0.94
SCARNA6-201ENST00000515982 CFAP44Q96MT7 982 aa9.2□□□□□ -0.94
SCARNA6-201ENST00000515982 THUMPD2Q9BTF0 503 aaKnown RBP9.2□□□□□ -0.94
SCARNA6-201ENST00000515982 BCL11BQ9C0K0 894 aaPredicted RBP9.2□□□□□ -0.94
SCARNA6-201ENST00000515982 MYH16Q9H6N6 1097 aa9.2□□□□□ -0.94
SCARNA6-201ENST00000515982 IFT57Q9NWB7 429 aa9.2□□□□□ -0.94
SCARNA6-201ENST00000515982 LAS1LQ9Y4W2 734 aaKnown RBP9.2□□□□□ -0.94
SCARNA6-201ENST00000515982 ZNF521Q96K83 1311 aa9.2□□□□□ -0.94
SCARNA6-201ENST00000515982 KDM6AO15550 1401 aaPredicted RBP9.2□□□□□ -0.94
SCARNA6-201ENST00000515982 E9PSI1 815 aa9.19□□□□□ -0.94
SCARNA6-201ENST00000515982 CHL1O00533 1208 aa9.19□□□□□ -0.94
SCARNA6-201ENST00000515982 TRIM37O94972 964 aa9.19□□□□□ -0.94
SCARNA6-201ENST00000515982 HMGB2P26583 209 aaKnown RBP9.19□□□□□ -0.94
SCARNA6-201ENST00000515982 PIGBQ92521 554 aa9.19□□□□□ -0.94
SCARNA6-201ENST00000515982 SMARCC1Q92922 1105 aaPredicted RBP9.19□□□□□ -0.94
SCARNA6-201ENST00000515982 YTHDC1Q96MU7 727 aaKnown RBP9.19□□□□□ -0.94
SCARNA6-201ENST00000515982 KCNQ2O43526 872 aa9.18□□□□□ -0.94
SCARNA6-201ENST00000515982 ZNF853P0CG23 659 aa9.18□□□□□ -0.94
SCARNA6-201ENST00000515982 TTC5Q8N0Z6 440 aa9.18□□□□□ -0.94
SCARNA6-201ENST00000515982 TSPYL4Q9UJ04 414 aa9.18□□□□□ -0.94
SCARNA6-201ENST00000515982 ADAMTS7Q9UKP4 1686 aa9.18□□□□□ -0.94
SCARNA6-201ENST00000515982 VIRMAQ69YN4 1812 aaKnown RBP9.17□□□□□ -0.94
SCARNA6-201ENST00000515982 APBA3O96018 575 aa9.17□□□□□ -0.94
SCARNA6-201ENST00000515982 SLFN5Q08AF3 891 aa9.17□□□□□ -0.94
SCARNA6-201ENST00000515982 ZNF790Q6PG37 636 aa9.17□□□□□ -0.94
SCARNA6-201ENST00000515982 CHMP4AQ9BY43 222 aa9.17□□□□□ -0.94
SCARNA6-201ENST00000515982 ATG3Q9NT62 314 aa9.17□□□□□ -0.94
SCARNA6-201ENST00000515982 MIS18AQ9NYP9 233 aa9.17□□□□□ -0.94
SCARNA6-201ENST00000515982 ITGB4P16144 1822 aa9.17□□□□□ -0.94
SCARNA6-201ENST00000515982 TNS1Q9HBL0 1735 aaKnown RBP9.17□□□□□ -0.94
SCARNA6-201ENST00000515982 MRC1P22897 1456 aa9.16□□□□□ -0.94
SCARNA6-201ENST00000515982 DCAF8L1A6NGE4 600 aa9.16□□□□□ -0.94
SCARNA6-201ENST00000515982 TRMT2AQ8IZ69 625 aaKnown RBP9.16□□□□□ -0.94
SCARNA6-201ENST00000515982 FMNL2Q96PY5 1086 aa9.16□□□□□ -0.94
SCARNA6-201ENST00000515982 SPON1Q9HCB6 807 aa9.16□□□□□ -0.94
SCARNA6-201ENST00000515982 MBIPQ9NS73 344 aa9.16□□□□□ -0.94
SCARNA6-201ENST00000515982 ASAP1Q9ULH1 1129 aa9.16□□□□□ -0.94
SCARNA6-201ENST00000515982 SBF2Q86WG5 1849 aa9.16□□□□□ -0.94
SCARNA6-201ENST00000515982 SOS1Q07889 1333 aaPredicted RBP9.15□□□□□ -0.94
SCARNA6-201ENST00000515982 DOT1LQ8TEK3 1739 aa9.15□□□□□ -0.94
SCARNA6-201ENST00000515982 SLC39A6Q13433 755 aa9.15□□□□□ -0.94
SCARNA6-201ENST00000515982 IFFO2Q5TF58 517 aa9.15□□□□□ -0.94
SCARNA6-201ENST00000515982 CDCA7LQ96GN5 454 aa9.15□□□□□ -0.94
SCARNA6-201ENST00000515982 TEX13AQ9BXU3 409 aaPredicted RBP9.15□□□□□ -0.94
SCARNA6-201ENST00000515982 PPP1R1BQ9UD71 204 aaPredicted RBP9.15□□□□□ -0.94
SCARNA6-201ENST00000515982 NHSQ6T4R5 1651 aa9.14□□□□□ -0.95
SCARNA6-201ENST00000515982 PLSCR1O15162 318 aa9.14□□□□□ -0.95
SCARNA6-201ENST00000515982 EIF4A1P60842 406 aaKnown RBP9.14□□□□□ -0.95
SCARNA6-201ENST00000515982 NBPF14Q5TI25 921 aa9.14□□□□□ -0.95
SCARNA6-201ENST00000515982 VSIG10Q8N0Z9 540 aa9.14□□□□□ -0.95
SCARNA6-201ENST00000515982 ZNF784Q8NCA9 323 aaPredicted RBP9.14□□□□□ -0.95
SCARNA6-201ENST00000515982 SPINK5Q9NQ38 1064 aaPredicted RBP9.14□□□□□ -0.95
SCARNA6-201ENST00000515982 SIPA1L3O60292 1781 aaPredicted RBP9.14□□□□□ -0.95
SCARNA6-201ENST00000515982 TOGARAM1Q9Y4F4 1720 aa9.14□□□□□ -0.95
SCARNA6-201ENST00000515982 FANCIQ9NVI1 1328 aa9.13□□□□□ -0.95
SCARNA6-201ENST00000515982 LOC102724428A0A0B4J2F2 783 aa9.13□□□□□ -0.95
SCARNA6-201ENST00000515982 KCNQ3O43525 872 aa9.13□□□□□ -0.95
SCARNA6-201ENST00000515982 PTCD1O75127 700 aaKnown RBP9.13□□□□□ -0.95
SCARNA6-201ENST00000515982 SNRPA1P09661 255 aaKnown RBP9.13□□□□□ -0.95
SCARNA6-201ENST00000515982 CT47B1P0C2W7 299 aaPredicted RBP9.13□□□□□ -0.95
SCARNA6-201ENST00000515982 SIK1P57059 783 aa9.13□□□□□ -0.95
SCARNA6-201ENST00000515982 SLC27A3Q5K4L6 730 aa9.13□□□□□ -0.95
SCARNA6-201ENST00000515982 DUSP27Q5VZP5 1158 aa9.13□□□□□ -0.95
SCARNA6-201ENST00000515982 PTF1AQ7RTS3 328 aa9.13□□□□□ -0.95
SCARNA6-201ENST00000515982 TSR2Q969E8 191 aaKnown RBP9.13□□□□□ -0.95
SCARNA6-201ENST00000515982 ZNF496Q96IT1 587 aaPredicted RBP9.13□□□□□ -0.95
SCARNA6-201ENST00000515982 RBM42Q9BTD8 480 aaKnown RBP9.13□□□□□ -0.95
SCARNA6-201ENST00000515982 PALLDQ8WX93 1383 aa9.12□□□□□ -0.95
SCARNA6-201ENST00000515982 GIGYF1O75420 1035 aaPredicted RBP9.12□□□□□ -0.95
SCARNA6-201ENST00000515982 STARD3NLO95772 234 aa9.12□□□□□ -0.95
SCARNA6-201ENST00000515982 HOXB7P09629 217 aa9.12□□□□□ -0.95
SCARNA6-201ENST00000515982 ATP6V1AP38606 617 aa9.12□□□□□ -0.95
SCARNA6-201ENST00000515982 EXOSC9Q06265 439 aaKnown RBP9.12□□□□□ -0.95
SCARNA6-201ENST00000515982 ZNF428Q96B54 188 aa9.12□□□□□ -0.95
SCARNA6-201ENST00000515982 BTAF1O14981 1849 aa9.12□□□□□ -0.95
SCARNA6-201ENST00000515982 HEG1Q9ULI3 1381 aa9.12□□□□□ -0.95
SCARNA6-201ENST00000515982 TWISTNBQ3B726 338 aaPredicted RBP9.11□□□□□ -0.95
SCARNA6-201ENST00000515982 C8orf58Q8NAV2 365 aa9.11□□□□□ -0.95
SCARNA6-201ENST00000515982 KDM3BQ7LBC6 1761 aa9.11□□□□□ -0.95
SCARNA6-201ENST00000515982 RREB1Q92766 1687 aa9.1□□□□□ -0.95
SCARNA6-201ENST00000515982 ELL2O00472 640 aaPredicted RBP9.1□□□□□ -0.95
SCARNA6-201ENST00000515982 VAMP4O75379 141 aa9.1□□□□□ -0.95
SCARNA6-201ENST00000515982 C1QTNF8P60827 252 aa9.1□□□□□ -0.95
SCARNA6-201ENST00000515982 TXNRD1Q16881 649 aa9.1□□□□□ -0.95
SCARNA6-201ENST00000515982 CCDC30Q5VVM6 783 aa9.1□□□□□ -0.95
SCARNA6-201ENST00000515982 CCNL1Q9UK58 526 aaPredicted RBP9.1□□□□□ -0.95
SCARNA6-201ENST00000515982 NUP188Q5SRE5 1749 aa9.1□□□□□ -0.95
SCARNA6-201ENST00000515982 EIF2S2P20042 333 aaKnown RBP9.09□□□□□ -0.95
SCARNA6-201ENST00000515982 DNAJC10Q8IXB1 793 aa9.09□□□□□ -0.95
SCARNA6-201ENST00000515982 KCPQ6ZWJ8 1503 aa9.09□□□□□ -0.95
SCARNA6-201ENST00000515982 PAPPAQ13219 1627 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms