RNA–Protein interactions for RNA: ENST00000515768.5

CSNK1A1-207, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CSNK1A1, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-207ENST00000515768 NLRP3Q96P20 1036 aa11.97□□□□□ -0.49
CSNK1A1-207ENST00000515768 ESYT1Q9BSJ8 1104 aa11.97□□□□□ -0.49
CSNK1A1-207ENST00000515768 VRTNQ9H8Y1 702 aa11.97□□□□□ -0.49
CSNK1A1-207ENST00000515768 DNMT3LQ9UJW3 386 aa11.97□□□□□ -0.49
CSNK1A1-207ENST00000515768 FIGNL2A6NMB9 653 aa11.96□□□□□ -0.49
CSNK1A1-207ENST00000515768 TMEM229AB2RXF0 380 aa11.96□□□□□ -0.49
CSNK1A1-207ENST00000515768 RNF144AP50876 292 aaPredicted RBP11.96□□□□□ -0.49
CSNK1A1-207ENST00000515768 ESCO1Q5FWF5 840 aa11.96□□□□□ -0.49
CSNK1A1-207ENST00000515768 DNAAF2Q9NVR5 837 aaKnown RBP11.96□□□□□ -0.49
CSNK1A1-207ENST00000515768 HRH3Q9Y5N1 445 aa11.96□□□□□ -0.49
CSNK1A1-207ENST00000515768 LAMC3Q9Y6N6 1575 aa11.96□□□□□ -0.5
CSNK1A1-207ENST00000515768 INHAP05111 366 aa11.95□□□□□ -0.5
CSNK1A1-207ENST00000515768 RASA1P20936 1047 aa11.95□□□□□ -0.5
CSNK1A1-207ENST00000515768 CDCA8Q53HL2 280 aa11.95□□□□□ -0.5
CSNK1A1-207ENST00000515768 RNF217Q8TC41 542 aa11.95□□□□□ -0.5
CSNK1A1-207ENST00000515768 MAN1A2O60476 641 aa11.94□□□□□ -0.5
CSNK1A1-207ENST00000515768 GPC1P35052 558 aa11.94□□□□□ -0.5
CSNK1A1-207ENST00000515768 LARGE2Q8N3Y3 721 aa11.94□□□□□ -0.5
CSNK1A1-207ENST00000515768 WASLO00401 505 aaPredicted RBP11.93□□□□□ -0.5
CSNK1A1-207ENST00000515768 SRPK2P78362 688 aaKnown RBP11.93□□□□□ -0.5
CSNK1A1-207ENST00000515768 CENPCQ03188 943 aa11.93□□□□□ -0.5
CSNK1A1-207ENST00000515768 CRTC2Q53ET0 693 aaPredicted RBP11.93□□□□□ -0.5
CSNK1A1-207ENST00000515768 CCDC102BQ68D86 513 aa11.93□□□□□ -0.5
CSNK1A1-207ENST00000515768 TPCN2Q8NHX9 752 aa11.93□□□□□ -0.5
CSNK1A1-207ENST00000515768 ZNF594Q96JF6 807 aaPredicted RBP11.93□□□□□ -0.5
CSNK1A1-207ENST00000515768 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.92□□□□□ -0.5
CSNK1A1-207ENST00000515768 LARP1Q6PKG0 1096 aaKnown RBP11.92□□□□□ -0.5
CSNK1A1-207ENST00000515768 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.92□□□□□ -0.5
CSNK1A1-207ENST00000515768 GRIP2Q9C0E4 1043 aa11.92□□□□□ -0.5
CSNK1A1-207ENST00000515768 SERTAD1Q9UHV2 236 aa11.92□□□□□ -0.5
CSNK1A1-207ENST00000515768 DKK1O94907 266 aa11.91□□□□□ -0.5
CSNK1A1-207ENST00000515768 PTK7Q13308 1070 aa11.91□□□□□ -0.5
CSNK1A1-207ENST00000515768 SIX5Q8N196 739 aa11.91□□□□□ -0.5
CSNK1A1-207ENST00000515768 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.9□□□□□ -0.5
CSNK1A1-207ENST00000515768 SLC27A3Q5K4L6 730 aa11.9□□□□□ -0.5
CSNK1A1-207ENST00000515768 PRICKLE2Q7Z3G6 844 aa11.9□□□□□ -0.5
CSNK1A1-207ENST00000515768 FHDC1Q9C0D6 1143 aaPredicted RBP11.9□□□□□ -0.5
CSNK1A1-207ENST00000515768 ZNF358Q9NW07 568 aa11.9□□□□□ -0.5
CSNK1A1-207ENST00000515768 NESP48681 1621 aa11.89□□□□□ -0.51
CSNK1A1-207ENST00000515768 FAM196BA6NMK8 535 aa11.89□□□□□ -0.51
CSNK1A1-207ENST00000515768 USP17L15C9J2P7 530 aa11.89□□□□□ -0.51
CSNK1A1-207ENST00000515768 USP17L10C9JJH3 530 aa11.89□□□□□ -0.51
CSNK1A1-207ENST00000515768 USP17L13C9JLJ4 530 aa11.89□□□□□ -0.51
CSNK1A1-207ENST00000515768 USP17L12C9JPN9 530 aa11.89□□□□□ -0.51
CSNK1A1-207ENST00000515768 USP17L11C9JVI0 530 aa11.89□□□□□ -0.51
CSNK1A1-207ENST00000515768 USP17L21D6R901 530 aa11.89□□□□□ -0.51
CSNK1A1-207ENST00000515768 USP17L18D6R9N7 530 aa11.89□□□□□ -0.51
CSNK1A1-207ENST00000515768 USP17L22D6RA61 530 aa11.89□□□□□ -0.51
CSNK1A1-207ENST00000515768 USP17L17D6RBQ6 530 aa11.89□□□□□ -0.51
CSNK1A1-207ENST00000515768 USP17L19D6RCP7 530 aa11.89□□□□□ -0.51
CSNK1A1-207ENST00000515768 USP17L20D6RJB6 530 aa11.89□□□□□ -0.51
CSNK1A1-207ENST00000515768 USP17L24Q0WX57 530 aa11.89□□□□□ -0.51
CSNK1A1-207ENST00000515768 LYSMD3Q7Z3D4 306 aa11.89□□□□□ -0.51
CSNK1A1-207ENST00000515768 SLC4A9Q96Q91 983 aa11.89□□□□□ -0.51
CSNK1A1-207ENST00000515768 CADPSQ9ULU8 1353 aa11.89□□□□□ -0.51
CSNK1A1-207ENST00000515768 SMTNP53814 917 aa11.88□□□□□ -0.51
CSNK1A1-207ENST00000515768 TLR1Q15399 786 aa11.88□□□□□ -0.51
CSNK1A1-207ENST00000515768 SFI1A8K8P3 1242 aa11.87□□□□□ -0.51
CSNK1A1-207ENST00000515768 PBXIP1Q96AQ6 731 aa11.87□□□□□ -0.51
CSNK1A1-207ENST00000515768 ZSCAN10Q96SZ4 725 aaPredicted RBP11.87□□□□□ -0.51
CSNK1A1-207ENST00000515768 ARID3AQ99856 593 aa11.87□□□□□ -0.51
CSNK1A1-207ENST00000515768 BACH1O14867 736 aa11.86□□□□□ -0.51
CSNK1A1-207ENST00000515768 DPYDQ12882 1025 aa11.86□□□□□ -0.51
CSNK1A1-207ENST00000515768 RHOQP17081 205 aa11.85□□□□□ -0.51
CSNK1A1-207ENST00000515768 POU4F2Q12837 409 aa11.85□□□□□ -0.51
CSNK1A1-207ENST00000515768 ANKMY2Q8IV38 441 aa11.85□□□□□ -0.51
CSNK1A1-207ENST00000515768 RBM19Q9Y4C8 960 aaKnown RBP11.85□□□□□ -0.51
CSNK1A1-207ENST00000515768 PDS5BQ9NTI5 1447 aa11.85□□□□□ -0.51
CSNK1A1-207ENST00000515768 ERCC6Q03468 1493 aa11.84□□□□□ -0.51
CSNK1A1-207ENST00000515768 A6NJY4 79 aa11.84□□□□□ -0.51
CSNK1A1-207ENST00000515768 SPATA31C2B4DYI2 1134 aa11.84□□□□□ -0.51
CSNK1A1-207ENST00000515768 SEC13P55735 322 aa11.84□□□□□ -0.51
CSNK1A1-207ENST00000515768 MTFR1Q15390 333 aa11.84□□□□□ -0.51
CSNK1A1-207ENST00000515768 ARXQ96QS3 562 aa11.84□□□□□ -0.51
CSNK1A1-207ENST00000515768 PTSQ03393 145 aa11.83□□□□□ -0.52
CSNK1A1-207ENST00000515768 TMEM214Q6NUQ4 689 aaKnown RBP11.83□□□□□ -0.52
CSNK1A1-207ENST00000515768 PPARGC1BQ86YN6 1023 aaKnown RBP11.83□□□□□ -0.52
CSNK1A1-207ENST00000515768 TNS4Q8IZW8 715 aa11.83□□□□□ -0.52
CSNK1A1-207ENST00000515768 CFTRP13569 1480 aa11.83□□□□□ -0.52
CSNK1A1-207ENST00000515768 M0R2N6 131 aa11.82□□□□□ -0.52
CSNK1A1-207ENST00000515768 ATG7O95352 703 aa11.82□□□□□ -0.52
CSNK1A1-207ENST00000515768 EPHA4P54764 986 aa11.82□□□□□ -0.52
CSNK1A1-207ENST00000515768 NBPF10Q6P3W6 841 aaKnown RBP11.82□□□□□ -0.52
CSNK1A1-207ENST00000515768 NBPF15Q8N660 670 aa11.82□□□□□ -0.52
CSNK1A1-207ENST00000515768 TSEN2Q8NCE0 465 aaKnown RBP11.82□□□□□ -0.52
CSNK1A1-207ENST00000515768 NOVA2Q9UNW9 492 aaKnown RBP11.82□□□□□ -0.52
CSNK1A1-207ENST00000515768 USP3Q9Y6I4 520 aa11.82□□□□□ -0.52
CSNK1A1-207ENST00000515768 CDK2AP1O14519 115 aa11.81□□□□□ -0.52
CSNK1A1-207ENST00000515768 GTF2E1P29083 439 aaPredicted RBP11.81□□□□□ -0.52
CSNK1A1-207ENST00000515768 IQSEC3Q9UPP2 1182 aaPredicted RBP11.81□□□□□ -0.52
CSNK1A1-207ENST00000515768 CCDC88BA6NC98 1476 aa11.81□□□□□ -0.52
CSNK1A1-207ENST00000515768 CUX2O14529 1486 aa11.81□□□□□ -0.52
CSNK1A1-207ENST00000515768 SENP3-EIF4A1A0A087X0R7 540 aa11.8□□□□□ -0.52
CSNK1A1-207ENST00000515768 ELOAQ14241 798 aaKnown RBP11.8□□□□□ -0.52
CSNK1A1-207ENST00000515768 C4orf17Q53FE4 359 aa11.8□□□□□ -0.52
CSNK1A1-207ENST00000515768 GNASQ5JWF2 1037 aa11.8□□□□□ -0.52
CSNK1A1-207ENST00000515768 TAS1R3Q7RTX0 852 aa11.8□□□□□ -0.52
CSNK1A1-207ENST00000515768 SCHIP1Q9P0W5 487 aaPredicted RBP11.8□□□□□ -0.52
CSNK1A1-207ENST00000515768 ZMIZ1Q9ULJ6 1067 aa11.8□□□□□ -0.52
CSNK1A1-207ENST00000515768 KIF21AQ7Z4S6 1674 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 222.9 ms