RNA–Protein interactions for RNA: ENST00000515499.5

TRIM41-208, Transcript of tripartite motif containing 41, humanhuman

TSL 3

Gene TRIM41, Length 914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-208ENST00000515499 MRC1P22897 1456 aa27.45■■□□□ 1.99
TRIM41-208ENST00000515499 TEFQ10587 303 aa27.44■■□□□ 1.98
TRIM41-208ENST00000515499 FAM9BQ8IZU0 186 aa27.44■■□□□ 1.98
TRIM41-208ENST00000515499 TXNRD1Q16881 649 aa27.43■■□□□ 1.98
TRIM41-208ENST00000515499 MCM10Q7L590 875 aa27.43■■□□□ 1.98
TRIM41-208ENST00000515499 PROM2Q8N271 834 aa27.43■■□□□ 1.98
TRIM41-208ENST00000515499 ASAP1Q9ULH1 1129 aa27.43■■□□□ 1.98
TRIM41-208ENST00000515499 LMOD3Q0VAK6 560 aa27.42■■□□□ 1.98
TRIM41-208ENST00000515499 ATG3Q9NT62 314 aa27.42■■□□□ 1.98
TRIM41-208ENST00000515499 PALLDQ8WX93 1383 aa27.41■■□□□ 1.98
TRIM41-208ENST00000515499 APAF1O14727 1248 aa27.41■■□□□ 1.98
TRIM41-208ENST00000515499 DCTN1Q14203 1278 aa27.41■■□□□ 1.98
TRIM41-208ENST00000515499 RRP7AQ9Y3A4 280 aaKnown RBP27.41■■□□□ 1.98
TRIM41-208ENST00000515499 NEUROD2Q15784 382 aa27.4■■□□□ 1.98
TRIM41-208ENST00000515499 SLC27A3Q5K4L6 730 aa27.4■■□□□ 1.98
TRIM41-208ENST00000515499 LY75O60449 1722 aa27.39■■□□□ 1.98
TRIM41-208ENST00000515499 RREB1Q92766 1687 aa27.39■■□□□ 1.97
TRIM41-208ENST00000515499 SIPA1L3O60292 1781 aaPredicted RBP27.37■■□□□ 1.97
TRIM41-208ENST00000515499 TRIM35Q9UPQ4 493 aa27.36■■□□□ 1.97
TRIM41-208ENST00000515499 CCNL1Q9UK58 526 aaPredicted RBP27.35■■□□□ 1.97
TRIM41-208ENST00000515499 TAF7Q15545 349 aaPredicted RBP27.34■■□□□ 1.97
TRIM41-208ENST00000515499 LRRC4BQ9NT99 713 aa27.34■■□□□ 1.97
TRIM41-208ENST00000515499 NUP188Q5SRE5 1749 aa27.33■■□□□ 1.97
TRIM41-208ENST00000515499 LOC102724428A0A0B4J2F2 783 aa27.33■■□□□ 1.97
TRIM41-208ENST00000515499 BTBD11A6QL63 1104 aa27.33■■□□□ 1.97
TRIM41-208ENST00000515499 HMGB2P26583 209 aaKnown RBP27.33■■□□□ 1.97
TRIM41-208ENST00000515499 SIK1P57059 783 aa27.33■■□□□ 1.97
TRIM41-208ENST00000515499 THUMPD2Q9BTF0 503 aaKnown RBP27.33■■□□□ 1.97
TRIM41-208ENST00000515499 SLC39A6Q13433 755 aa27.32■■□□□ 1.96
TRIM41-208ENST00000515499 NCBP3Q53F19 620 aaKnown RBP27.32■■□□□ 1.96
TRIM41-208ENST00000515499 PAPPAQ13219 1627 aa27.31■■□□□ 1.96
TRIM41-208ENST00000515499 NBPF14Q5TI25 921 aa27.31■■□□□ 1.96
TRIM41-208ENST00000515499 RBM42Q9BTD8 480 aaKnown RBP27.31■■□□□ 1.96
TRIM41-208ENST00000515499 ZNF790Q6PG37 636 aa27.3■■□□□ 1.96
TRIM41-208ENST00000515499 TTC5Q8N0Z6 440 aa27.3■■□□□ 1.96
TRIM41-208ENST00000515499 PTCD1O75127 700 aaKnown RBP27.29■■□□□ 1.96
TRIM41-208ENST00000515499 KCNQ4P56696 695 aa27.29■■□□□ 1.96
TRIM41-208ENST00000515499 ATP6V1AP38606 617 aa27.28■■□□□ 1.96
TRIM41-208ENST00000515499 CCDC27Q2M243 656 aa27.28■■□□□ 1.96
TRIM41-208ENST00000515499 ZNF831Q5JPB2 1677 aa27.27■■□□□ 1.96
TRIM41-208ENST00000515499 SLC4A9Q96Q91 983 aa27.27■■□□□ 1.96
TRIM41-208ENST00000515499 BABAM1Q9NWV8 329 aa27.26■■□□□ 1.95
TRIM41-208ENST00000515499 VSIG10Q8N0Z9 540 aa27.25■■□□□ 1.95
TRIM41-208ENST00000515499 NGEFQ8N5V2 710 aa27.25■■□□□ 1.95
TRIM41-208ENST00000515499 KCPQ6ZWJ8 1503 aa27.25■■□□□ 1.95
TRIM41-208ENST00000515499 UBR2Q8IWV8 1755 aa27.25■■□□□ 1.95
TRIM41-208ENST00000515499 CALD1Q05682 793 aaKnown RBP27.24■■□□□ 1.95
TRIM41-208ENST00000515499 ITPK1Q13572 414 aa27.24■■□□□ 1.95
TRIM41-208ENST00000515499 MIS18AQ9NYP9 233 aa27.24■■□□□ 1.95
TRIM41-208ENST00000515499 KCNQ3O43525 872 aa27.23■■□□□ 1.95
TRIM41-208ENST00000515499 ZNF496Q96IT1 587 aaPredicted RBP27.23■■□□□ 1.95
TRIM41-208ENST00000515499 FMNL2Q96PY5 1086 aa27.23■■□□□ 1.95
TRIM41-208ENST00000515499 ANO8Q9HCE9 1232 aaPredicted RBP27.23■■□□□ 1.95
TRIM41-208ENST00000515499 STK32BQ9NY57 414 aa27.23■■□□□ 1.95
TRIM41-208ENST00000515499 TAF1LQ8IZX4 1826 aa27.23■■□□□ 1.95
TRIM41-208ENST00000515499 C5P01031 1676 aa27.22■■□□□ 1.95
TRIM41-208ENST00000515499 SENP3-EIF4A1A0A087X0R7 540 aa27.22■■□□□ 1.95
TRIM41-208ENST00000515499 WWC1Q8IX03 1113 aa27.22■■□□□ 1.95
TRIM41-208ENST00000515499 AKT1S1Q96B36 256 aa27.22■■□□□ 1.95
TRIM41-208ENST00000515499 SLC15A2Q16348 729 aa27.21■■□□□ 1.95
TRIM41-208ENST00000515499 LINC00116Q8NCU8 138 aa27.2■■□□□ 1.94
TRIM41-208ENST00000515499 TSPYL4Q9UJ04 414 aa27.2■■□□□ 1.94
TRIM41-208ENST00000515499 HEG1Q9ULI3 1381 aa27.2■■□□□ 1.94
TRIM41-208ENST00000515499 KDM3BQ7LBC6 1761 aa27.2■■□□□ 1.94
TRIM41-208ENST00000515499 CHL1O00533 1208 aa27.19■■□□□ 1.94
TRIM41-208ENST00000515499 CICQ96RK0 1608 aaPredicted RBP27.19■■□□□ 1.94
TRIM41-208ENST00000515499 R3HDM1Q15032 1099 aaKnown RBP27.18■■□□□ 1.94
TRIM41-208ENST00000515499 ZNF827Q17R98 1081 aa27.18■■□□□ 1.94
TRIM41-208ENST00000515499 CFAP44Q96MT7 982 aa27.18■■□□□ 1.94
TRIM41-208ENST00000515499 SALL2Q9Y467 1007 aaPredicted RBP27.18■■□□□ 1.94
TRIM41-208ENST00000515499 DNAJC10Q8IXB1 793 aa27.17■■□□□ 1.94
TRIM41-208ENST00000515499 TEX13AQ9BXU3 409 aaPredicted RBP27.17■■□□□ 1.94
TRIM41-208ENST00000515499 LAS1LQ9Y4W2 734 aaKnown RBP27.17■■□□□ 1.94
TRIM41-208ENST00000515499 C4BP0C0L5 1744 aa27.16■■□□□ 1.94
TRIM41-208ENST00000515499 TJP1Q07157 1748 aa27.16■■□□□ 1.94
TRIM41-208ENST00000515499 ZNF853P0CG23 659 aa27.16■■□□□ 1.94
TRIM41-208ENST00000515499 EIF4A1P60842 406 aaKnown RBP27.16■■□□□ 1.94
TRIM41-208ENST00000515499 GNAI1P63096 354 aa27.16■■□□□ 1.94
TRIM41-208ENST00000515499 RC3H1Q5TC82 1133 aaKnown RBP27.16■■□□□ 1.94
TRIM41-208ENST00000515499 IFT57Q9NWB7 429 aa27.16■■□□□ 1.94
TRIM41-208ENST00000515499 WDR63Q8IWG1 891 aa27.15■■□□□ 1.94
TRIM41-208ENST00000515499 AK7Q96M32 723 aa27.15■■□□□ 1.94
TRIM41-208ENST00000515499 TFCP2L1Q9NZI6 479 aa27.15■■□□□ 1.94
TRIM41-208ENST00000515499 COL5A3P25940 1745 aaPredicted RBP27.15■■□□□ 1.94
TRIM41-208ENST00000515499 SNRPA1P09661 255 aaKnown RBP27.14■■□□□ 1.94
TRIM41-208ENST00000515499 IL16Q14005 1332 aa27.14■■□□□ 1.93
TRIM41-208ENST00000515499 CNTNAP4Q9C0A0 1308 aa27.14■■□□□ 1.93
TRIM41-208ENST00000515499 PSDA5PKW4 1024 aaPredicted RBP27.13■■□□□ 1.93
TRIM41-208ENST00000515499 STARD3NLO95772 234 aa27.12■■□□□ 1.93
TRIM41-208ENST00000515499 CYP19A1P11511 503 aaPredicted RBP27.12■■□□□ 1.93
TRIM41-208ENST00000515499 CRKLP46109 303 aaKnown RBP27.1■■□□□ 1.93
TRIM41-208ENST00000515499 MBIPQ9NS73 344 aa27.1■■□□□ 1.93
TRIM41-208ENST00000515499 GIGYF1O75420 1035 aaPredicted RBP27.09■■□□□ 1.93
TRIM41-208ENST00000515499 INTS5Q6P9B9 1019 aaKnown RBP27.09■■□□□ 1.93
TRIM41-208ENST00000515499 QSER1Q2KHR3 1735 aa27.09■■□□□ 1.93
TRIM41-208ENST00000515499 GNPATO15228 680 aa27.08■■□□□ 1.93
TRIM41-208ENST00000515499 FLAD1Q8NFF5 587 aa27.08■■□□□ 1.93
TRIM41-208ENST00000515499 CCDC87Q9NVE4 849 aa27.08■■□□□ 1.93
TRIM41-208ENST00000515499 USP16Q9Y5T5 823 aa27.08■■□□□ 1.93
TRIM41-208ENST00000515499 ZNF521Q96K83 1311 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms