RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	MTUS2	Q5JR59	1369 aa		10.2	□□□□□ -0.78
HIPK1-210	ENST00000514621	TEX14	Q8IWB6	1497 aa		10.2	□□□□□ -0.78
HIPK1-210	ENST00000514621	TTC37	Q6PGP7	1564 aa		10.19	□□□□□ -0.78
HIPK1-210	ENST00000514621	BMP2	P12643	396 aa		10.19	□□□□□ -0.78
HIPK1-210	ENST00000514621	SEPT12	Q8IYM1	358 aa		10.19	□□□□□ -0.78
HIPK1-210	ENST00000514621	TRIM52	Q96A61	297 aa		10.19	□□□□□ -0.78
HIPK1-210	ENST00000514621	TIAM1	Q13009	1591 aa		10.18	□□□□□ -0.78
HIPK1-210	ENST00000514621	ESPN	B1AK53	854 aa		10.18	□□□□□ -0.78
HIPK1-210	ENST00000514621	UPP2	O95045	317 aa		10.18	□□□□□ -0.78
HIPK1-210	ENST00000514621	FLII	Q13045	1269 aa		10.18	□□□□□ -0.78
HIPK1-210	ENST00000514621	CBLB	Q13191	982 aa		10.18	□□□□□ -0.78
HIPK1-210	ENST00000514621	LCE2C	Q5TA81	110 aa		10.18	□□□□□ -0.78
HIPK1-210	ENST00000514621		Q6ZVU0	165 aa		10.18	□□□□□ -0.78
HIPK1-210	ENST00000514621	TSEN34	Q9BSV6	310 aa	Known RBP	10.18	□□□□□ -0.78
HIPK1-210	ENST00000514621	GDPD2	Q9HCC8	539 aa		10.18	□□□□□ -0.78
HIPK1-210	ENST00000514621	MAP3K1	Q13233	1512 aa		10.17	□□□□□ -0.78
HIPK1-210	ENST00000514621	PLCH2	O75038	1416 aa		10.17	□□□□□ -0.78
HIPK1-210	ENST00000514621	SOBP	A7XYQ1	873 aa		10.17	□□□□□ -0.78
HIPK1-210	ENST00000514621	RAB15	P59190	212 aa		10.17	□□□□□ -0.78
HIPK1-210	ENST00000514621	KANK4	Q5T7N3	995 aa	Predicted RBP	10.17	□□□□□ -0.78
HIPK1-210	ENST00000514621	COL17A1	Q9UMD9	1497 aa	Predicted RBP	10.17	□□□□□ -0.78
HIPK1-210	ENST00000514621	CCDC125	Q86Z20	511 aa		10.16	□□□□□ -0.78
HIPK1-210	ENST00000514621	NXF1	Q9UBU9	619 aa	Known RBP	10.16	□□□□□ -0.78
HIPK1-210	ENST00000514621	LRRC9	Q6ZRR7	1453 aa		10.16	□□□□□ -0.78
HIPK1-210	ENST00000514621	ABL2	P42684	1182 aa		10.15	□□□□□ -0.78
HIPK1-210	ENST00000514621	RNF20	Q5VTR2	975 aa		10.15	□□□□□ -0.78
HIPK1-210	ENST00000514621	EFCAB2	Q5VUJ9	269 aa		10.15	□□□□□ -0.78
HIPK1-210	ENST00000514621	TMPRSS4	Q9NRS4	437 aa		10.15	□□□□□ -0.78
HIPK1-210	ENST00000514621	EHBP1L1	Q8N3D4	1523 aa		10.15	□□□□□ -0.78
HIPK1-210	ENST00000514621	NEO1	Q92859	1461 aa		10.15	□□□□□ -0.78
HIPK1-210	ENST00000514621	PHLDB1	Q86UU1	1377 aa		10.14	□□□□□ -0.79
HIPK1-210	ENST00000514621	SOS2	Q07890	1332 aa	Predicted RBP	10.14	□□□□□ -0.79
HIPK1-210	ENST00000514621	ERVH48-1	M5A8F1	160 aa		10.14	□□□□□ -0.79
HIPK1-210	ENST00000514621	GIGYF1	O75420	1035 aa	Predicted RBP	10.14	□□□□□ -0.79
HIPK1-210	ENST00000514621	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
HIPK1-210	ENST00000514621	IRF5	Q13568	498 aa		10.14	□□□□□ -0.79
HIPK1-210	ENST00000514621	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.14	□□□□□ -0.79
HIPK1-210	ENST00000514621	FANCA	O15360	1455 aa		10.14	□□□□□ -0.79
HIPK1-210	ENST00000514621	KDM6B	O15054	1643 aa		10.14	□□□□□ -0.79
HIPK1-210	ENST00000514621	ARAP3	Q8WWN8	1544 aa		10.13	□□□□□ -0.79
HIPK1-210	ENST00000514621	GPATCH8	Q9UKJ3	1502 aa	Known RBP	10.13	□□□□□ -0.79
HIPK1-210	ENST00000514621	MAN1A2	O60476	641 aa		10.13	□□□□□ -0.79
HIPK1-210	ENST00000514621	WASHC4	Q2M389	1173 aa		10.13	□□□□□ -0.79
HIPK1-210	ENST00000514621	AKNA	Q7Z591	1439 aa		10.13	□□□□□ -0.79
HIPK1-210	ENST00000514621	CCNB3	Q8WWL7	1395 aa		10.13	□□□□□ -0.79
HIPK1-210	ENST00000514621	NCOA2	Q15596	1464 aa		10.12	□□□□□ -0.79
HIPK1-210	ENST00000514621	VEGFB	P49765	207 aa		10.12	□□□□□ -0.79
HIPK1-210	ENST00000514621	NPAS3	Q8IXF0	933 aa		10.12	□□□□□ -0.79
HIPK1-210	ENST00000514621	DNMT3L	Q9UJW3	386 aa		10.12	□□□□□ -0.79
HIPK1-210	ENST00000514621	COG6	Q9Y2V7	657 aa		10.12	□□□□□ -0.79
HIPK1-210	ENST00000514621	MYO5C	Q9NQX4	1742 aa		10.12	□□□□□ -0.79
HIPK1-210	ENST00000514621	ARHGAP5	Q13017	1502 aa		10.12	□□□□□ -0.79
HIPK1-210	ENST00000514621		H3BM21	787 aa		10.11	□□□□□ -0.79
HIPK1-210	ENST00000514621	SPINT1	O43278	529 aa		10.11	□□□□□ -0.79
HIPK1-210	ENST00000514621	RAD21	O60216	631 aa		10.11	□□□□□ -0.79
HIPK1-210	ENST00000514621	LILRA1	O75019	489 aa		10.11	□□□□□ -0.79
HIPK1-210	ENST00000514621	RAPGEF3	O95398	923 aa		10.11	□□□□□ -0.79
HIPK1-210	ENST00000514621	WWC1	Q8IX03	1113 aa		10.11	□□□□□ -0.79
HIPK1-210	ENST00000514621	AGBL1	Q96MI9	1066 aa		10.11	□□□□□ -0.79
HIPK1-210	ENST00000514621	CFDP1	Q9UEE9	299 aa	Predicted RBP	10.11	□□□□□ -0.79
HIPK1-210	ENST00000514621	CFAP74	Q9C0B2	1584 aa		10.1	□□□□□ -0.79
HIPK1-210	ENST00000514621	VAC14	Q08AM6	782 aa		10.1	□□□□□ -0.79
HIPK1-210	ENST00000514621	PREX2	Q70Z35	1606 aa		10.1	□□□□□ -0.79
HIPK1-210	ENST00000514621	CDC42BPA	Q5VT25	1732 aa		10.1	□□□□□ -0.79
HIPK1-210	ENST00000514621	SUPT6H	Q7KZ85	1726 aa	Known RBP	10.1	□□□□□ -0.79
HIPK1-210	ENST00000514621	SCAPER	Q9BY12	1400 aa		10.09	□□□□□ -0.79
HIPK1-210	ENST00000514621	TTLL8	A6PVC2	850 aa		10.09	□□□□□ -0.79
HIPK1-210	ENST00000514621	RELB	Q01201	579 aa		10.09	□□□□□ -0.79
HIPK1-210	ENST00000514621	SLC16A10	Q8TF71	515 aa		10.09	□□□□□ -0.79
HIPK1-210	ENST00000514621	CEP126	Q9P2H0	1117 aa		10.09	□□□□□ -0.79
HIPK1-210	ENST00000514621	ZNF777	Q9ULD5	760 aa	Predicted RBP	10.09	□□□□□ -0.79
HIPK1-210	ENST00000514621	CDC42BPB	Q9Y5S2	1711 aa		10.09	□□□□□ -0.79
HIPK1-210	ENST00000514621	ADGRL1	O94910	1474 aa		10.09	□□□□□ -0.79
HIPK1-210	ENST00000514621	WIPF1	O43516	503 aa		10.08	□□□□□ -0.8
HIPK1-210	ENST00000514621	ADH1A	P07327	375 aa		10.08	□□□□□ -0.8
HIPK1-210	ENST00000514621	ADD1	P35611	737 aa	Known RBP	10.08	□□□□□ -0.8
HIPK1-210	ENST00000514621	CYLD	Q9NQC7	956 aa		10.08	□□□□□ -0.8
HIPK1-210	ENST00000514621	DENND4B	O75064	1496 aa	Predicted RBP	10.08	□□□□□ -0.8
HIPK1-210	ENST00000514621	ARHGEF12	Q9NZN5	1544 aa		10.07	□□□□□ -0.8
HIPK1-210	ENST00000514621	ZNF644	Q9H582	1327 aa	Predicted RBP	10.07	□□□□□ -0.8
HIPK1-210	ENST00000514621	SOX11	P35716	441 aa		10.06	□□□□□ -0.8
HIPK1-210	ENST00000514621	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.06	□□□□□ -0.8
HIPK1-210	ENST00000514621	AFAP1	Q8N556	730 aa		10.06	□□□□□ -0.8
HIPK1-210	ENST00000514621	KDF1	Q8NAX2	398 aa	Predicted RBP	10.06	□□□□□ -0.8
HIPK1-210	ENST00000514621	POGZ	Q7Z3K3	1410 aa		10.06	□□□□□ -0.8
HIPK1-210	ENST00000514621	ERBB4	Q15303	1308 aa		10.06	□□□□□ -0.8
HIPK1-210	ENST00000514621	FRMPD1	Q5SYB0	1578 aa		10.05	□□□□□ -0.8
HIPK1-210	ENST00000514621	SAMD9L	Q8IVG5	1584 aa		10.05	□□□□□ -0.8
HIPK1-210	ENST00000514621	CTSO	P43234	321 aa	Predicted RBP	10.05	□□□□□ -0.8
HIPK1-210	ENST00000514621	HNRNPM	P52272	730 aa	Known RBP eCLIP	10.05	□□□□□ -0.8
HIPK1-210	ENST00000514621	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.05	□□□□□ -0.8
HIPK1-210	ENST00000514621	IRF7	Q92985	503 aa		10.05	□□□□□ -0.8
HIPK1-210	ENST00000514621	POM121	Q96HA1	1249 aa		10.05	□□□□□ -0.8
HIPK1-210	ENST00000514621	INSM2	Q96T92	566 aa	Predicted RBP	10.05	□□□□□ -0.8
HIPK1-210	ENST00000514621	PCDHB11	Q9Y5F2	797 aa		10.05	□□□□□ -0.8
HIPK1-210	ENST00000514621	ABCC1	P33527	1531 aa		10.05	□□□□□ -0.8
HIPK1-210	ENST00000514621	ITSN2	Q9NZM3	1697 aa		10.04	□□□□□ -0.8
HIPK1-210	ENST00000514621	SEMA3F	Q13275	785 aa		10.04	□□□□□ -0.8
HIPK1-210	ENST00000514621	CC2D2B	Q6DHV5	1058 aa		10.04	□□□□□ -0.8
HIPK1-210	ENST00000514621	ESF1	Q9H501	851 aa	Known RBP	10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms