RNA–Protein interactions for RNA: ENST00000514508.1

COPB2-212, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 4

Gene COPB2, Length 635 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-212ENST00000514508 ANP32CO43423 234 aa16.47■□□□□ 0.23
COPB2-212ENST00000514508 KCNQ4P56696 695 aa16.47■□□□□ 0.23
COPB2-212ENST00000514508 SLC52A2Q9HAB3 445 aa16.47■□□□□ 0.23
COPB2-212ENST00000514508 LOC102724428A0A0B4J2F2 783 aa16.46■□□□□ 0.23
COPB2-212ENST00000514508 SIK1P57059 783 aa16.46■□□□□ 0.23
COPB2-212ENST00000514508 PLEKHF1Q96S99 279 aa16.46■□□□□ 0.23
COPB2-212ENST00000514508 ZNF831Q5JPB2 1677 aa16.46■□□□□ 0.23
COPB2-212ENST00000514508 QSER1Q2KHR3 1735 aa16.45■□□□□ 0.22
COPB2-212ENST00000514508 WDR43Q15061 677 aaKnown RBP eCLIP16.45■□□□□ 0.22
COPB2-212ENST00000514508 AKT1S1Q96B36 256 aa16.45■□□□□ 0.22
COPB2-212ENST00000514508 DLG5Q8TDM6 1919 aa16.45■□□□□ 0.22
COPB2-212ENST00000514508 MAPK8IP3Q9UPT6 1336 aa16.45■□□□□ 0.22
COPB2-212ENST00000514508 HTATSF1O43719 755 aaKnown RBP16.44■□□□□ 0.22
COPB2-212ENST00000514508 ZNF827Q17R98 1081 aa16.44■□□□□ 0.22
COPB2-212ENST00000514508 IL17REQ8NFR9 667 aa16.44■□□□□ 0.22
COPB2-212ENST00000514508 SIPA1L3O60292 1781 aaPredicted RBP16.43■□□□□ 0.22
COPB2-212ENST00000514508 CASZ1Q86V15 1759 aa16.43■□□□□ 0.22
COPB2-212ENST00000514508 CEMIPQ8WUJ3 1361 aa16.43■□□□□ 0.22
COPB2-212ENST00000514508 ATP6V1AP38606 617 aa16.43■□□□□ 0.22
COPB2-212ENST00000514508 TEFQ10587 303 aa16.43■□□□□ 0.22
COPB2-212ENST00000514508 RTF1Q92541 710 aaKnown RBP16.43■□□□□ 0.22
COPB2-212ENST00000514508 C4BP0C0L5 1744 aa16.42■□□□□ 0.22
COPB2-212ENST00000514508 RBM42Q9BTD8 480 aaKnown RBP16.42■□□□□ 0.22
COPB2-212ENST00000514508 TFCP2L1Q9NZI6 479 aa16.42■□□□□ 0.22
COPB2-212ENST00000514508 TUBGCP6Q96RT7 1819 aa16.42■□□□□ 0.22
COPB2-212ENST00000514508 LRP5O75197 1615 aa16.41■□□□□ 0.22
COPB2-212ENST00000514508 NFE2L2Q16236 605 aa16.41■□□□□ 0.22
COPB2-212ENST00000514508 ADAMTS8Q9UP79 889 aa16.4■□□□□ 0.22
COPB2-212ENST00000514508 CICQ96RK0 1608 aaPredicted RBP16.39■□□□□ 0.21
COPB2-212ENST00000514508 PTCD1O75127 700 aaKnown RBP16.39■□□□□ 0.21
COPB2-212ENST00000514508 ITPK1Q13572 414 aa16.39■□□□□ 0.21
COPB2-212ENST00000514508 SLC4A9Q96Q91 983 aa16.39■□□□□ 0.21
COPB2-212ENST00000514508 COL5A3P25940 1745 aaPredicted RBP16.39■□□□□ 0.21
COPB2-212ENST00000514508 UBR2Q8IWV8 1755 aa16.38■□□□□ 0.21
COPB2-212ENST00000514508 SLC39A6Q13433 755 aa16.38■□□□□ 0.21
COPB2-212ENST00000514508 MCM10Q7L590 875 aa16.38■□□□□ 0.21
COPB2-212ENST00000514508 TTC5Q8N0Z6 440 aa16.38■□□□□ 0.21
COPB2-212ENST00000514508 LINC00116Q8NCU8 138 aa16.38■□□□□ 0.21
COPB2-212ENST00000514508 AK7Q96M32 723 aa16.38■□□□□ 0.21
COPB2-212ENST00000514508 PDGFDQ9GZP0 370 aaPredicted RBP16.38■□□□□ 0.21
COPB2-212ENST00000514508 PNPLA7Q6ZV29 1317 aa16.38■□□□□ 0.21
COPB2-212ENST00000514508 UBR3Q6ZT12 1888 aa16.37■□□□□ 0.21
COPB2-212ENST00000514508 FLAD1Q8NFF5 587 aa16.37■□□□□ 0.21
COPB2-212ENST00000514508 SLC16A10Q8TF71 515 aa16.37■□□□□ 0.21
COPB2-212ENST00000514508 RUNDC1Q96C34 613 aa16.37■□□□□ 0.21
COPB2-212ENST00000514508 SPON1Q9HCB6 807 aa16.37■□□□□ 0.21
COPB2-212ENST00000514508 TJP1Q07157 1748 aa16.36■□□□□ 0.21
COPB2-212ENST00000514508 KCPQ6ZWJ8 1503 aa16.36■□□□□ 0.21
COPB2-212ENST00000514508 BTBD11A6QL63 1104 aa16.36■□□□□ 0.21
COPB2-212ENST00000514508 DCTN1Q14203 1278 aa16.36■□□□□ 0.21
COPB2-212ENST00000514508 CCDC184Q52MB2 194 aa16.36■□□□□ 0.21
COPB2-212ENST00000514508 CCDC146Q8IYE0 955 aa16.36■□□□□ 0.21
COPB2-212ENST00000514508 TMPOP42166 694 aaKnown RBP16.35■□□□□ 0.21
COPB2-212ENST00000514508 RIPK4P57078 832 aa16.35■□□□□ 0.21
COPB2-212ENST00000514508 RC3H1Q5TC82 1133 aaKnown RBP16.35■□□□□ 0.21
COPB2-212ENST00000514508 ZNF790Q6PG37 636 aa16.35■□□□□ 0.21
COPB2-212ENST00000514508 VSIG10Q8N0Z9 540 aa16.35■□□□□ 0.21
COPB2-212ENST00000514508 MTFR1LQ9H019 292 aa16.35■□□□□ 0.21
COPB2-212ENST00000514508 MRS2Q9HD23 443 aa16.35■□□□□ 0.21
COPB2-212ENST00000514508 MYH14Q7Z406 1995 aaKnown RBP16.35■□□□□ 0.21
COPB2-212ENST00000514508 ZBTB7AO95365 584 aa16.34■□□□□ 0.21
COPB2-212ENST00000514508 LMOD3Q0VAK6 560 aa16.34■□□□□ 0.21
COPB2-212ENST00000514508 TAF7Q15545 349 aaPredicted RBP16.34■□□□□ 0.21
COPB2-212ENST00000514508 COL23A1Q86Y22 540 aaPredicted RBP16.34■□□□□ 0.21
COPB2-212ENST00000514508 CNTNAP4Q9C0A0 1308 aa16.34■□□□□ 0.21
COPB2-212ENST00000514508 GNPATO15228 680 aa16.33■□□□□ 0.2
COPB2-212ENST00000514508 SSFA2P28290 1259 aa16.33■□□□□ 0.2
COPB2-212ENST00000514508 MSH5O43196 834 aa16.32■□□□□ 0.2
COPB2-212ENST00000514508 DNAJC10Q8IXB1 793 aa16.32■□□□□ 0.2
COPB2-212ENST00000514508 PNISRQ8TF01 805 aaKnown RBP16.32■□□□□ 0.2
COPB2-212ENST00000514508 ZNF496Q96IT1 587 aaPredicted RBP16.32■□□□□ 0.2
COPB2-212ENST00000514508 FMNL2Q96PY5 1086 aa16.32■□□□□ 0.2
COPB2-212ENST00000514508 COL24A1Q17RW2 1714 aa16.31■□□□□ 0.2
COPB2-212ENST00000514508 HEG1Q9ULI3 1381 aa16.31■□□□□ 0.2
COPB2-212ENST00000514508 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.31■□□□□ 0.2
COPB2-212ENST00000514508 NEUROD2Q15784 382 aa16.31■□□□□ 0.2
COPB2-212ENST00000514508 TEX13AQ9BXU3 409 aaPredicted RBP16.31■□□□□ 0.2
COPB2-212ENST00000514508 ATF5Q9Y2D1 282 aaPredicted RBP16.31■□□□□ 0.2
COPB2-212ENST00000514508 RTCBQ9Y3I0 505 aaKnown RBP16.31■□□□□ 0.2
COPB2-212ENST00000514508 RPS6KA4O75676 772 aa16.3■□□□□ 0.2
COPB2-212ENST00000514508 PHF14O94880 888 aa16.3■□□□□ 0.2
COPB2-212ENST00000514508 CRKLP46109 303 aaKnown RBP16.3■□□□□ 0.2
COPB2-212ENST00000514508 AMIGO3Q86WK7 504 aa16.3■□□□□ 0.2
COPB2-212ENST00000514508 RRP7AQ9Y3A4 280 aaKnown RBP16.3■□□□□ 0.2
COPB2-212ENST00000514508 KDM3BQ7LBC6 1761 aa16.3■□□□□ 0.2
COPB2-212ENST00000514508 KCNQ3O43525 872 aa16.29■□□□□ 0.2
COPB2-212ENST00000514508 CYP19A1P11511 503 aaPredicted RBP16.29■□□□□ 0.2
COPB2-212ENST00000514508 ADRA2BP18089 450 aa16.29■□□□□ 0.2
COPB2-212ENST00000514508 PTGER2P43116 358 aa16.29■□□□□ 0.2
COPB2-212ENST00000514508 TRAPPC3LQ5T215 181 aa16.29■□□□□ 0.2
COPB2-212ENST00000514508 THUMPD2Q9BTF0 503 aaKnown RBP16.29■□□□□ 0.2
COPB2-212ENST00000514508 APAF1O14727 1248 aa16.28■□□□□ 0.2
COPB2-212ENST00000514508 STARD3NLO95772 234 aa16.28■□□□□ 0.2
COPB2-212ENST00000514508 INTS5Q6P9B9 1019 aaKnown RBP16.28■□□□□ 0.2
COPB2-212ENST00000514508 SGIP1Q9BQI5 828 aa16.28■□□□□ 0.2
COPB2-212ENST00000514508 CCDC87Q9NVE4 849 aa16.28■□□□□ 0.2
COPB2-212ENST00000514508 PPP1R1BQ9UD71 204 aaPredicted RBP16.28■□□□□ 0.2
COPB2-212ENST00000514508 SMIM5Q71RC9 77 aa16.27■□□□□ 0.2
COPB2-212ENST00000514508 BABAM1Q9NWV8 329 aa16.27■□□□□ 0.2
COPB2-212ENST00000514508 MIS18AQ9NYP9 233 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 232.2 ms