RNA–Protein interactions for RNA: ENST00000513101.1

ACSF2-223, Transcript of acyl-CoA synthetase family member 2, human

TSL 4

Gene ACSF2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-223	ENST00000513101	CCNL1	Q9UK58	526 aa	Predicted RBP	11.58	□□□□□ -0.56
ACSF2-223	ENST00000513101	ASAP1	Q9ULH1	1129 aa		11.58	□□□□□ -0.56
ACSF2-223	ENST00000513101	MAP3K5	Q99683	1374 aa		11.57	□□□□□ -0.56
ACSF2-223	ENST00000513101	IL17RE	Q8NFR9	667 aa		11.57	□□□□□ -0.56
ACSF2-223	ENST00000513101	BTAF1	O14981	1849 aa		11.57	□□□□□ -0.56
ACSF2-223	ENST00000513101	DOT1L	Q8TEK3	1739 aa		11.57	□□□□□ -0.56
ACSF2-223	ENST00000513101	RREB1	Q92766	1687 aa		11.56	□□□□□ -0.56
ACSF2-223	ENST00000513101	LOC102724428	A0A0B4J2F2	783 aa		11.56	□□□□□ -0.56
ACSF2-223	ENST00000513101	PSD	A5PKW4	1024 aa	Predicted RBP	11.56	□□□□□ -0.56
ACSF2-223	ENST00000513101	SIK1	P57059	783 aa		11.56	□□□□□ -0.56
ACSF2-223	ENST00000513101	WDR43	Q15061	677 aa	Known RBP eCLIP	11.56	□□□□□ -0.56
ACSF2-223	ENST00000513101	NCBP3	Q53F19	620 aa	Known RBP	11.56	□□□□□ -0.56
ACSF2-223	ENST00000513101	AKT1S1	Q96B36	256 aa		11.56	□□□□□ -0.56
ACSF2-223	ENST00000513101	CEMIP	Q8WUJ3	1361 aa		11.55	□□□□□ -0.56
ACSF2-223	ENST00000513101	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.55	□□□□□ -0.56
ACSF2-223	ENST00000513101	TEF	Q10587	303 aa		11.55	□□□□□ -0.56
ACSF2-223	ENST00000513101	NFE2L2	Q16236	605 aa		11.55	□□□□□ -0.56
ACSF2-223	ENST00000513101	NGEF	Q8N5V2	710 aa		11.55	□□□□□ -0.56
ACSF2-223	ENST00000513101	RTF1	Q92541	710 aa	Known RBP	11.55	□□□□□ -0.56
ACSF2-223	ENST00000513101	ADAMTS8	Q9UP79	889 aa		11.55	□□□□□ -0.56
ACSF2-223	ENST00000513101	MAPK8IP3	Q9UPT6	1336 aa		11.55	□□□□□ -0.56
ACSF2-223	ENST00000513101	TOGARAM1	Q9Y4F4	1720 aa		11.55	□□□□□ -0.56
ACSF2-223	ENST00000513101	KCNQ4	P56696	695 aa		11.54	□□□□□ -0.56
ACSF2-223	ENST00000513101	KAT6B	Q8WYB5	2073 aa		11.54	□□□□□ -0.56
ACSF2-223	ENST00000513101	MRC1	P22897	1456 aa		11.53	□□□□□ -0.56
ACSF2-223	ENST00000513101	NUP188	Q5SRE5	1749 aa		11.53	□□□□□ -0.56
ACSF2-223	ENST00000513101	ATP6V1A	P38606	617 aa		11.53	□□□□□ -0.56
ACSF2-223	ENST00000513101	ZNF827	Q17R98	1081 aa		11.53	□□□□□ -0.56
ACSF2-223	ENST00000513101	RUNDC1	Q96C34	613 aa		11.53	□□□□□ -0.56
ACSF2-223	ENST00000513101	RBM42	Q9BTD8	480 aa	Known RBP	11.53	□□□□□ -0.56
ACSF2-223	ENST00000513101	ITPK1	Q13572	414 aa		11.52	□□□□□ -0.57
ACSF2-223	ENST00000513101	SLC4A9	Q96Q91	983 aa		11.52	□□□□□ -0.57
ACSF2-223	ENST00000513101	PTCD1	O75127	700 aa	Known RBP	11.51	□□□□□ -0.57
ACSF2-223	ENST00000513101	TMPO	P42166	694 aa	Known RBP	11.51	□□□□□ -0.57
ACSF2-223	ENST00000513101	RC3H1	Q5TC82	1133 aa	Known RBP	11.51	□□□□□ -0.57
ACSF2-223	ENST00000513101	MCM10	Q7L590	875 aa		11.51	□□□□□ -0.57
ACSF2-223	ENST00000513101	VSIG10	Q8N0Z9	540 aa		11.51	□□□□□ -0.57
ACSF2-223	ENST00000513101	FLAD1	Q8NFF5	587 aa		11.51	□□□□□ -0.57
ACSF2-223	ENST00000513101	SLC16A10	Q8TF71	515 aa		11.51	□□□□□ -0.57
ACSF2-223	ENST00000513101	TFCP2L1	Q9NZI6	479 aa		11.51	□□□□□ -0.57
ACSF2-223	ENST00000513101	ADAMTS7	Q9UKP4	1686 aa		11.51	□□□□□ -0.57
ACSF2-223	ENST00000513101	ITGB4	P16144	1822 aa		11.51	□□□□□ -0.57
ACSF2-223	ENST00000513101	PAPPA	Q13219	1627 aa		11.5	□□□□□ -0.57
ACSF2-223	ENST00000513101	LY75	O60449	1722 aa		11.5	□□□□□ -0.57
ACSF2-223	ENST00000513101	RIPK4	P57078	832 aa		11.5	□□□□□ -0.57
ACSF2-223	ENST00000513101	LMOD3	Q0VAK6	560 aa		11.5	□□□□□ -0.57
ACSF2-223	ENST00000513101	SLC39A6	Q13433	755 aa		11.5	□□□□□ -0.57
ACSF2-223	ENST00000513101	DCTN1	Q14203	1278 aa		11.5	□□□□□ -0.57
ACSF2-223	ENST00000513101	TAF7	Q15545	349 aa	Predicted RBP	11.5	□□□□□ -0.57
ACSF2-223	ENST00000513101	ZNF790	Q6PG37	636 aa		11.5	□□□□□ -0.57
ACSF2-223	ENST00000513101	PPP4R3CP	Q6ZMV5	832 aa		11.5	□□□□□ -0.57
ACSF2-223	ENST00000513101	TTC5	Q8N0Z6	440 aa		11.5	□□□□□ -0.57
ACSF2-223	ENST00000513101	LINC00116	Q8NCU8	138 aa		11.5	□□□□□ -0.57
ACSF2-223	ENST00000513101	BTBD11	A6QL63	1104 aa		11.49	□□□□□ -0.57
ACSF2-223	ENST00000513101	CCDC146	Q8IYE0	955 aa		11.49	□□□□□ -0.57
ACSF2-223	ENST00000513101	AK7	Q96M32	723 aa		11.49	□□□□□ -0.57
ACSF2-223	ENST00000513101	PNPLA7	Q6ZV29	1317 aa		11.49	□□□□□ -0.57
ACSF2-223	ENST00000513101	ZNF521	Q96K83	1311 aa		11.49	□□□□□ -0.57
ACSF2-223	ENST00000513101	SCN11A	Q9UI33	1791 aa		11.49	□□□□□ -0.57
ACSF2-223	ENST00000513101	SSFA2	P28290	1259 aa		11.48	□□□□□ -0.57
ACSF2-223	ENST00000513101	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.48	□□□□□ -0.57
ACSF2-223	ENST00000513101	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.48	□□□□□ -0.57
ACSF2-223	ENST00000513101	SPON1	Q9HCB6	807 aa		11.48	□□□□□ -0.57
ACSF2-223	ENST00000513101	CNTNAP4	Q9C0A0	1308 aa		11.48	□□□□□ -0.57
ACSF2-223	ENST00000513101	COL23A1	Q86Y22	540 aa	Predicted RBP	11.47	□□□□□ -0.57
ACSF2-223	ENST00000513101	ZNF496	Q96IT1	587 aa	Predicted RBP	11.47	□□□□□ -0.57
ACSF2-223	ENST00000513101	FMNL2	Q96PY5	1086 aa		11.47	□□□□□ -0.57
ACSF2-223	ENST00000513101	MTFR1L	Q9H019	292 aa		11.47	□□□□□ -0.57
ACSF2-223	ENST00000513101	BABAM1	Q9NWV8	329 aa		11.47	□□□□□ -0.57
ACSF2-223	ENST00000513101	GNPAT	O15228	680 aa		11.46	□□□□□ -0.57
ACSF2-223	ENST00000513101	RPS6KA4	O75676	772 aa		11.46	□□□□□ -0.57
ACSF2-223	ENST00000513101	CYP19A1	P11511	503 aa	Predicted RBP	11.46	□□□□□ -0.57
ACSF2-223	ENST00000513101	CCDC27	Q2M243	656 aa		11.46	□□□□□ -0.57
ACSF2-223	ENST00000513101	DNAJC10	Q8IXB1	793 aa		11.46	□□□□□ -0.57
ACSF2-223	ENST00000513101	TRIM35	Q9UPQ4	493 aa		11.46	□□□□□ -0.57
ACSF2-223	ENST00000513101	RTCB	Q9Y3I0	505 aa	Known RBP	11.46	□□□□□ -0.57
ACSF2-223	ENST00000513101	HEG1	Q9ULI3	1381 aa		11.45	□□□□□ -0.58
ACSF2-223	ENST00000513101	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.45	□□□□□ -0.58
ACSF2-223	ENST00000513101	APAF1	O14727	1248 aa		11.45	□□□□□ -0.58
ACSF2-223	ENST00000513101	KCNQ3	O43525	872 aa		11.45	□□□□□ -0.58
ACSF2-223	ENST00000513101	ZBTB7A	O95365	584 aa		11.45	□□□□□ -0.58
ACSF2-223	ENST00000513101	STARD3NL	O95772	234 aa		11.45	□□□□□ -0.58
ACSF2-223	ENST00000513101	CRKL	P46109	303 aa	Known RBP	11.45	□□□□□ -0.58
ACSF2-223	ENST00000513101	NEUROD2	Q15784	382 aa		11.45	□□□□□ -0.58
ACSF2-223	ENST00000513101	IFFO2	Q5TF58	517 aa		11.45	□□□□□ -0.58
ACSF2-223	ENST00000513101	THUMPD2	Q9BTF0	503 aa	Known RBP	11.45	□□□□□ -0.58
ACSF2-223	ENST00000513101	RRP7A	Q9Y3A4	280 aa	Known RBP	11.45	□□□□□ -0.58
ACSF2-223	ENST00000513101	ZNF831	Q5JPB2	1677 aa		11.45	□□□□□ -0.58
ACSF2-223	ENST00000513101	KCP	Q6ZWJ8	1503 aa		11.45	□□□□□ -0.58
ACSF2-223	ENST00000513101	TRAPPC3L	Q5T215	181 aa		11.44	□□□□□ -0.58
ACSF2-223	ENST00000513101	INTS5	Q6P9B9	1019 aa	Known RBP	11.44	□□□□□ -0.58
ACSF2-223	ENST00000513101	AMIGO3	Q86WK7	504 aa		11.44	□□□□□ -0.58
ACSF2-223	ENST00000513101	SGIP1	Q9BQI5	828 aa		11.44	□□□□□ -0.58
ACSF2-223	ENST00000513101	CCDC87	Q9NVE4	849 aa		11.44	□□□□□ -0.58
ACSF2-223	ENST00000513101	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.44	□□□□□ -0.58
ACSF2-223	ENST00000513101	SNRPA1	P09661	255 aa	Known RBP	11.43	□□□□□ -0.58
ACSF2-223	ENST00000513101	PTGER2	P43116	358 aa		11.43	□□□□□ -0.58
ACSF2-223	ENST00000513101	ARHGEF1	Q92888	912 aa	Known RBP	11.43	□□□□□ -0.58
ACSF2-223	ENST00000513101	MIS18A	Q9NYP9	233 aa		11.43	□□□□□ -0.58
ACSF2-223	ENST00000513101	C4B	P0C0L5	1744 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms