RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 C16orf71Q8IYS4 520 aaPredicted RBP22.2■■□□□ 1.14
DDR1-269ENST00000512725 RBM42Q9BTD8 480 aaKnown RBP22.2■■□□□ 1.14
DDR1-269ENST00000512725 NMRK2Q9NPI5 230 aa22.2■■□□□ 1.14
DDR1-269ENST00000512725 RTCBQ9Y3I0 505 aaKnown RBP22.2■■□□□ 1.14
DDR1-269ENST00000512725 PXDNLA1KZ92 1463 aa22.2■■□□□ 1.14
DDR1-269ENST00000512725 CICQ96RK0 1608 aaPredicted RBP22.2■■□□□ 1.14
DDR1-269ENST00000512725 IFNL2Q8IZJ0 200 aa22.19■■□□□ 1.14
DDR1-269ENST00000512725 EYA1Q99502 592 aa22.18■■□□□ 1.14
DDR1-269ENST00000512725 ATG3Q9NT62 314 aa22.18■■□□□ 1.14
DDR1-269ENST00000512725 CCDC87Q9NVE4 849 aa22.18■■□□□ 1.14
DDR1-269ENST00000512725 PHKG2P15735 406 aa22.17■■□□□ 1.14
DDR1-269ENST00000512725 DPEP1P16444 411 aa22.17■■□□□ 1.14
DDR1-269ENST00000512725 CDCA8Q53HL2 280 aa22.17■■□□□ 1.14
DDR1-269ENST00000512725 NLGN1Q8N2Q7 840 aa22.17■■□□□ 1.14
DDR1-269ENST00000512725 PARP3Q9Y6F1 533 aa22.16■■□□□ 1.14
DDR1-269ENST00000512725 RFC4P35249 363 aa22.15■■□□□ 1.14
DDR1-269ENST00000512725 DNAJC5GQ8N7S2 189 aa22.15■■□□□ 1.14
DDR1-269ENST00000512725 C9orf131Q5VYM1 1079 aa22.14■■□□□ 1.13
DDR1-269ENST00000512725 ARHGEF1Q92888 912 aaKnown RBP22.14■■□□□ 1.13
DDR1-269ENST00000512725 CARD14Q9BXL6 1004 aa22.14■■□□□ 1.13
DDR1-269ENST00000512725 KIF13BQ9NQT8 1826 aa22.13■■□□□ 1.13
DDR1-269ENST00000512725 HTRA3P83110 453 aa22.13■■□□□ 1.13
DDR1-269ENST00000512725 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.13■■□□□ 1.13
DDR1-269ENST00000512725 WASHC2AQ641Q2 1341 aa22.12■■□□□ 1.13
DDR1-269ENST00000512725 KIAA1551Q9HCM1 1747 aa22.12■■□□□ 1.13
DDR1-269ENST00000512725 C10orf71Q711Q0 1435 aa22.12■■□□□ 1.13
DDR1-269ENST00000512725 TNNT2P45379 298 aaPredicted RBP22.11■■□□□ 1.13
DDR1-269ENST00000512725 NCAPD2Q15021 1401 aa22.11■■□□□ 1.13
DDR1-269ENST00000512725 CAPN15O75808 1086 aa22.1■■□□□ 1.13
DDR1-269ENST00000512725 GYS1P13807 737 aa22.1■■□□□ 1.13
DDR1-269ENST00000512725 RBM46Q8TBY0 533 aaKnown RBP22.1■■□□□ 1.13
DDR1-269ENST00000512725 C4AP0C0L4 1744 aa22.09■■□□□ 1.13
DDR1-269ENST00000512725 WDR90Q96KV7 1748 aa22.09■■□□□ 1.13
DDR1-269ENST00000512725 SLC4A9Q96Q91 983 aa22.09■■□□□ 1.13
DDR1-269ENST00000512725 POLR3GLQ9BT43 218 aa22.09■■□□□ 1.13
DDR1-269ENST00000512725 ADRA2BP18089 450 aa22.08■■□□□ 1.13
DDR1-269ENST00000512725 RC3H1Q5TC82 1133 aaKnown RBP22.08■■□□□ 1.13
DDR1-269ENST00000512725 RNF181Q9P0P0 153 aa22.08■■□□□ 1.13
DDR1-269ENST00000512725 PIM2Q9P1W9 311 aa22.08■■□□□ 1.13
DDR1-269ENST00000512725 RPS6KA4O75676 772 aa22.07■■□□□ 1.12
DDR1-269ENST00000512725 CABP4P57796 275 aa22.07■■□□□ 1.12
DDR1-269ENST00000512725 KLRG1Q96E93 195 aa22.07■■□□□ 1.12
DDR1-269ENST00000512725 POLKQ9UBT6 870 aa22.07■■□□□ 1.12
DDR1-269ENST00000512725 KDRP35968 1356 aa22.07■■□□□ 1.12
DDR1-269ENST00000512725 KDM2BQ8NHM5 1336 aa22.06■■□□□ 1.12
DDR1-269ENST00000512725 ERVV-2B6SEH9 535 aa22.06■■□□□ 1.12
DDR1-269ENST00000512725 EIF4A2Q14240 407 aaKnown RBP22.06■■□□□ 1.12
DDR1-269ENST00000512725 DALRD3Q5D0E6 543 aaKnown RBP22.06■■□□□ 1.12
DDR1-269ENST00000512725 RRAGCQ9HB90 399 aa22.06■■□□□ 1.12
DDR1-269ENST00000512725 PLEKHG2Q9H7P9 1386 aa22.06■■□□□ 1.12
DDR1-269ENST00000512725 KCPQ6ZWJ8 1503 aa22.06■■□□□ 1.12
DDR1-269ENST00000512725 PTCD1O75127 700 aaKnown RBP22.05■■□□□ 1.12
DDR1-269ENST00000512725 CNTNAP4Q9C0A0 1308 aa22.05■■□□□ 1.12
DDR1-269ENST00000512725 ANKRD26Q9UPS8 1709 aa22.04■■□□□ 1.12
DDR1-269ENST00000512725 HSP90AB1P08238 724 aaKnown RBP22.04■■□□□ 1.12
DDR1-269ENST00000512725 KCNA3P22001 575 aa22.04■■□□□ 1.12
DDR1-269ENST00000512725 FSTL1Q12841 308 aa22.04■■□□□ 1.12
DDR1-269ENST00000512725 COL13A1Q5TAT6 717 aaPredicted RBP22.04■■□□□ 1.12
DDR1-269ENST00000512725 DCAF5Q96JK2 942 aa22.04■■□□□ 1.12
DDR1-269ENST00000512725 SRP68Q9UHB9 627 aaKnown RBP22.04■■□□□ 1.12
DDR1-269ENST00000512725 ZNF530Q6P9A1 599 aaPredicted RBP22.03■■□□□ 1.12
DDR1-269ENST00000512725 BRCA1P38398 1863 aaKnown RBP22.03■■□□□ 1.12
DDR1-269ENST00000512725 CHRNA5P30532 468 aa22.02■■□□□ 1.12
DDR1-269ENST00000512725 PLEKHO1Q53GL0 409 aaPredicted RBP22.02■■□□□ 1.12
DDR1-269ENST00000512725 ARFGEF1Q9Y6D6 1849 aa22.01■■□□□ 1.11
DDR1-269ENST00000512725 COL5A3P25940 1745 aaPredicted RBP22.01■■□□□ 1.11
DDR1-269ENST00000512725 CRKLP46109 303 aaKnown RBP22■■□□□ 1.11
DDR1-269ENST00000512725 FKBP8Q14318 412 aa22■■□□□ 1.11
DDR1-269ENST00000512725 MTHFSP49914 203 aa21.99■■□□□ 1.11
DDR1-269ENST00000512725 TNS4Q8IZW8 715 aa21.99■■□□□ 1.11
DDR1-269ENST00000512725 MYH14Q7Z406 1995 aaKnown RBP21.99■■□□□ 1.11
DDR1-269ENST00000512725 C1orf141Q5JVX7 400 aa21.98■■□□□ 1.11
DDR1-269ENST00000512725 DDR1Q08345 913 aa21.97■■□□□ 1.11
DDR1-269ENST00000512725 JMYQ8N9B5 988 aa21.97■■□□□ 1.11
DDR1-269ENST00000512725 ZNF831Q5JPB2 1677 aa21.97■■□□□ 1.11
DDR1-269ENST00000512725 NFATC2IPQ8NCF5 419 aa21.96■■□□□ 1.11
DDR1-269ENST00000512725 SMC1BQ8NDV3 1235 aa21.96■■□□□ 1.11
DDR1-269ENST00000512725 USP42Q9H9J4 1324 aaKnown RBP21.96■■□□□ 1.11
DDR1-269ENST00000512725 KDM6AO15550 1401 aaPredicted RBP21.96■■□□□ 1.11
DDR1-269ENST00000512725 ZPR1O75312 459 aa21.95■■□□□ 1.1
DDR1-269ENST00000512725 RASSF7Q02833 373 aa21.95■■□□□ 1.1
DDR1-269ENST00000512725 AMOTQ4VCS5 1084 aa21.95■■□□□ 1.1
DDR1-269ENST00000512725 TNRC6CQ9HCJ0 1690 aaKnown RBP21.93■■□□□ 1.1
DDR1-269ENST00000512725 POLRMTO00411 1230 aaKnown RBP21.92■■□□□ 1.1
DDR1-269ENST00000512725 SBF1O95248 1867 aa21.92■■□□□ 1.1
DDR1-269ENST00000512725 USPL1Q5W0Q7 1092 aa21.91■■□□□ 1.1
DDR1-269ENST00000512725 AEBP1Q8IUX7 1158 aa21.91■■□□□ 1.1
DDR1-269ENST00000512725 PCNTO95613 3336 aa21.91■■□□□ 1.1
DDR1-269ENST00000512725 INTS5Q6P9B9 1019 aaKnown RBP21.89■■□□□ 1.09
DDR1-269ENST00000512725 TM4SF1P30408 202 aa21.88■■□□□ 1.09
DDR1-269ENST00000512725 DNAJC10Q8IXB1 793 aa21.88■■□□□ 1.09
DDR1-269ENST00000512725 TJP1Q07157 1748 aa21.87■■□□□ 1.09
DDR1-269ENST00000512725 HSPA1AP0DMV8 641 aaKnown RBP21.87■■□□□ 1.09
DDR1-269ENST00000512725 HSPA1BP0DMV9 641 aaKnown RBP21.87■■□□□ 1.09
DDR1-269ENST00000512725 VEGFAP15692 232 aaPredicted RBP21.87■■□□□ 1.09
DDR1-269ENST00000512725 LMNB1P20700 586 aa21.87■■□□□ 1.09
DDR1-269ENST00000512725 SULT6B1Q6IMI4 303 aa21.87■■□□□ 1.09
DDR1-269ENST00000512725 PRELPP51888 382 aa21.86■■□□□ 1.09
DDR1-269ENST00000512725 GLTPD2A6NH11 291 aa21.85■■□□□ 1.09
DDR1-269ENST00000512725 MORC1Q86VD1 984 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms