RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 KRT24Q2M2I5 525 aa12.87□□□□□ -0.35
CPNE4-209ENST00000512055 TTLL5Q6EMB2 1281 aa12.87□□□□□ -0.35
CPNE4-209ENST00000512055 CABP4P57796 275 aa12.87□□□□□ -0.35
CPNE4-209ENST00000512055 RNF20Q5VTR2 975 aa12.87□□□□□ -0.35
CPNE4-209ENST00000512055 NUTM1Q86Y26 1132 aa12.87□□□□□ -0.35
CPNE4-209ENST00000512055 K7ELQ4 463 aaPredicted RBP12.86□□□□□ -0.35
CPNE4-209ENST00000512055 ANKRD20A12PQ8NF67 263 aa12.86□□□□□ -0.35
CPNE4-209ENST00000512055 PDIA4P13667 645 aaKnown RBP12.86□□□□□ -0.35
CPNE4-209ENST00000512055 NF2P35240 595 aa12.86□□□□□ -0.35
CPNE4-209ENST00000512055 DNAJC2Q99543 621 aaKnown RBP12.86□□□□□ -0.35
CPNE4-209ENST00000512055 PRDM11Q9NQV5 511 aa12.86□□□□□ -0.35
CPNE4-209ENST00000512055 LRRIQ1Q96JM4 1722 aa12.86□□□□□ -0.35
CPNE4-209ENST00000512055 C8orf34Q49A92 452 aa12.86□□□□□ -0.35
CPNE4-209ENST00000512055 PLCD3Q8N3E9 789 aa12.86□□□□□ -0.35
CPNE4-209ENST00000512055 RNF214Q8ND24 703 aa12.86□□□□□ -0.35
CPNE4-209ENST00000512055 YEATS2Q9ULM3 1422 aa12.85□□□□□ -0.35
CPNE4-209ENST00000512055 TBC1D2Q9BYX2 928 aa12.85□□□□□ -0.35
CPNE4-209ENST00000512055 SPG7Q9UQ90 795 aa12.85□□□□□ -0.35
CPNE4-209ENST00000512055 ZMYM4Q5VZL5 1548 aa12.85□□□□□ -0.35
CPNE4-209ENST00000512055 UQCRHLA0A096LP55 91 aa12.85□□□□□ -0.35
CPNE4-209ENST00000512055 UQCRHP07919 91 aa12.85□□□□□ -0.35
CPNE4-209ENST00000512055 FLIIQ13045 1269 aa12.85□□□□□ -0.35
CPNE4-209ENST00000512055 VPS53Q5VIR6 699 aa12.85□□□□□ -0.35
CPNE4-209ENST00000512055 CCAR1Q8IX12 1150 aaKnown RBP12.85□□□□□ -0.35
CPNE4-209ENST00000512055 RBM42Q9BTD8 480 aaKnown RBP12.85□□□□□ -0.35
CPNE4-209ENST00000512055 BLMP54132 1417 aaPredicted RBP12.85□□□□□ -0.35
CPNE4-209ENST00000512055 FOSBP53539 338 aa12.85□□□□□ -0.35
CPNE4-209ENST00000512055 CCDC173Q0VFZ6 552 aa12.84□□□□□ -0.35
CPNE4-209ENST00000512055 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.84□□□□□ -0.35
CPNE4-209ENST00000512055 ZCCHC11Q5TAX3 1644 aaKnown RBP12.84□□□□□ -0.35
CPNE4-209ENST00000512055 LRRFIP2Q9Y608 721 aaKnown RBP12.84□□□□□ -0.35
CPNE4-209ENST00000512055 FAM177BA6PVY3 158 aa12.84□□□□□ -0.35
CPNE4-209ENST00000512055 ANXA1P04083 346 aa12.83□□□□□ -0.35
CPNE4-209ENST00000512055 BICD2Q8TD16 824 aa12.83□□□□□ -0.35
CPNE4-209ENST00000512055 ANKRD62A6NC57 917 aa12.83□□□□□ -0.36
CPNE4-209ENST00000512055 VAMP4O75379 141 aa12.83□□□□□ -0.36
CPNE4-209ENST00000512055 MRPL50Q8N5N7 158 aaKnown RBP12.83□□□□□ -0.36
CPNE4-209ENST00000512055 HDAC1Q13547 482 aaPredicted RBP12.83□□□□□ -0.36
CPNE4-209ENST00000512055 MEIS3Q99687 375 aa12.83□□□□□ -0.36
CPNE4-209ENST00000512055 PRPF40AO75400 957 aaKnown RBP12.83□□□□□ -0.36
CPNE4-209ENST00000512055 TSHZ3Q63HK5 1081 aa12.83□□□□□ -0.36
CPNE4-209ENST00000512055 PAXIP1Q6ZW49 1069 aaPredicted RBP12.83□□□□□ -0.36
CPNE4-209ENST00000512055 AACSQ86V21 672 aa12.83□□□□□ -0.36
CPNE4-209ENST00000512055 WASHC4Q2M389 1173 aa12.82□□□□□ -0.36
CPNE4-209ENST00000512055 CAVIN1Q6NZI2 390 aaKnown RBP12.82□□□□□ -0.36
CPNE4-209ENST00000512055 CWC27Q6UX04 472 aaKnown RBP12.82□□□□□ -0.36
CPNE4-209ENST00000512055 TRIM35Q9UPQ4 493 aa12.82□□□□□ -0.36
CPNE4-209ENST00000512055 CBX1P83916 185 aa12.82□□□□□ -0.36
CPNE4-209ENST00000512055 ENOX2Q16206 610 aaKnown RBP12.82□□□□□ -0.36
CPNE4-209ENST00000512055 CT47A1Q5JQC4 288 aaPredicted RBP12.82□□□□□ -0.36
CPNE4-209ENST00000512055 MX1P20591 662 aa12.82□□□□□ -0.36
CPNE4-209ENST00000512055 SASS6Q6UVJ0 657 aa12.82□□□□□ -0.36
CPNE4-209ENST00000512055 ERC1Q8IUD2 1116 aa12.82□□□□□ -0.36
CPNE4-209ENST00000512055 MCM4P33991 863 aa12.82□□□□□ -0.36
CPNE4-209ENST00000512055 KDM5DQ9BY66 1539 aa12.82□□□□□ -0.36
CPNE4-209ENST00000512055 PTPRCP08575 1304 aa12.81□□□□□ -0.36
CPNE4-209ENST00000512055 MTHFSDQ2M296 383 aaKnown RBP12.81□□□□□ -0.36
CPNE4-209ENST00000512055 TBC1D9Q6ZT07 1266 aa12.81□□□□□ -0.36
CPNE4-209ENST00000512055 PDILTQ8N807 584 aa12.81□□□□□ -0.36
CPNE4-209ENST00000512055 NUCB1Q02818 461 aa12.81□□□□□ -0.36
CPNE4-209ENST00000512055 LRRFIP1Q32MZ4 808 aaKnown RBP12.81□□□□□ -0.36
CPNE4-209ENST00000512055 SEC24BO95487 1268 aa12.81□□□□□ -0.36
CPNE4-209ENST00000512055 ARHGAP45Q92619 1136 aa12.81□□□□□ -0.36
CPNE4-209ENST00000512055 TBC1D32Q96NH3 1257 aa12.81□□□□□ -0.36
CPNE4-209ENST00000512055 KCNA6P17658 529 aa12.8□□□□□ -0.36
CPNE4-209ENST00000512055 TAX1BP1Q86VP1 789 aa12.8□□□□□ -0.36
CPNE4-209ENST00000512055 TRPM2O94759 1503 aa12.8□□□□□ -0.36
CPNE4-209ENST00000512055 ERVK-7P63135 1459 aa12.8□□□□□ -0.36
CPNE4-209ENST00000512055 ADCY10Q96PN6 1610 aa12.8□□□□□ -0.36
CPNE4-209ENST00000512055 PTCD1O75127 700 aaKnown RBP12.8□□□□□ -0.36
CPNE4-209ENST00000512055 KRT28Q7Z3Y7 464 aa12.8□□□□□ -0.36
CPNE4-209ENST00000512055 GOLGA6L10A6NI86 522 aa12.8□□□□□ -0.36
CPNE4-209ENST00000512055 BMP2KLQ5H9B9 411 aa12.8□□□□□ -0.36
CPNE4-209ENST00000512055 TTC21AQ8NDW8 1320 aa12.8□□□□□ -0.36
CPNE4-209ENST00000512055 UPF3BQ9BZI7 483 aaKnown RBP12.79□□□□□ -0.36
CPNE4-209ENST00000512055 DNAAF4Q8WXU2 420 aa12.79□□□□□ -0.36
CPNE4-209ENST00000512055 BCORL1Q5H9F3 1711 aa12.79□□□□□ -0.36
CPNE4-209ENST00000512055 GTF2A1P52655 376 aaPredicted RBP12.79□□□□□ -0.36
CPNE4-209ENST00000512055 AMOTQ4VCS5 1084 aa12.79□□□□□ -0.36
CPNE4-209ENST00000512055 CALCOCO1Q9P1Z2 691 aa12.79□□□□□ -0.36
CPNE4-209ENST00000512055 GOLGA6L10A0A0M3HER8 536 aa12.79□□□□□ -0.36
CPNE4-209ENST00000512055 ZBTB40Q9NUA8 1239 aa12.79□□□□□ -0.36
CPNE4-209ENST00000512055 IL13P35225 146 aa12.79□□□□□ -0.36
CPNE4-209ENST00000512055 MCM2P49736 904 aa12.79□□□□□ -0.36
CPNE4-209ENST00000512055 ODF2Q5BJF6 829 aa12.79□□□□□ -0.36
CPNE4-209ENST00000512055 NEO1Q92859 1461 aa12.78□□□□□ -0.36
CPNE4-209ENST00000512055 MAP3K19Q56UN5 1328 aa12.78□□□□□ -0.36
CPNE4-209ENST00000512055 CPLX1O14810 134 aa12.78□□□□□ -0.36
CPNE4-209ENST00000512055 EYA1Q99502 592 aa12.78□□□□□ -0.36
CPNE4-209ENST00000512055 PI4KAP2A4QPH2 592 aa12.78□□□□□ -0.36
CPNE4-209ENST00000512055 C16orf71Q8IYS4 520 aaPredicted RBP12.78□□□□□ -0.36
CPNE4-209ENST00000512055 PI4KAP1Q8N8J0 262 aa12.78□□□□□ -0.36
CPNE4-209ENST00000512055 CCDC112Q8NEF3 446 aa12.78□□□□□ -0.36
CPNE4-209ENST00000512055 CCDC85AQ96PX6 553 aaPredicted RBP12.78□□□□□ -0.36
CPNE4-209ENST00000512055 MYO6Q9UM54 1294 aa12.78□□□□□ -0.36
CPNE4-209ENST00000512055 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.78□□□□□ -0.36
CPNE4-209ENST00000512055 EIF3JO75822 258 aaKnown RBP12.78□□□□□ -0.36
CPNE4-209ENST00000512055 FAM193AP78312 1265 aa12.78□□□□□ -0.36
CPNE4-209ENST00000512055 KLHL34Q8N239 644 aa12.78□□□□□ -0.36
CPNE4-209ENST00000512055 KIF1BPQ96EK5 621 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms