RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 PLEKHF1Q96S99 279 aa11.97□□□□□ -0.49
NR1I3-230ENST00000511944 KDRP35968 1356 aa11.96□□□□□ -0.49
NR1I3-230ENST00000511944 RRS1Q15050 365 aaKnown RBP11.96□□□□□ -0.49
NR1I3-230ENST00000511944 CPDO75976 1380 aa11.95□□□□□ -0.5
NR1I3-230ENST00000511944 CRYBG1Q9Y4K1 1723 aa11.95□□□□□ -0.5
NR1I3-230ENST00000511944 MAPK8IP3Q9UPT6 1336 aa11.95□□□□□ -0.5
NR1I3-230ENST00000511944 SPDYE16A6NNV3 312 aaPredicted RBP11.95□□□□□ -0.5
NR1I3-230ENST00000511944 U2SURPO15042 1029 aaKnown RBP11.95□□□□□ -0.5
NR1I3-230ENST00000511944 GCP02774 474 aa11.95□□□□□ -0.5
NR1I3-230ENST00000511944 MLLT3P42568 568 aaPredicted RBP11.95□□□□□ -0.5
NR1I3-230ENST00000511944 AMPHP49418 695 aa11.95□□□□□ -0.5
NR1I3-230ENST00000511944 IP6K1Q92551 441 aa11.95□□□□□ -0.5
NR1I3-230ENST00000511944 MARVELD3Q96A59 401 aa11.95□□□□□ -0.5
NR1I3-230ENST00000511944 RSPH6AQ9H0K4 717 aa11.95□□□□□ -0.5
NR1I3-230ENST00000511944 NCAPD2Q15021 1401 aa11.94□□□□□ -0.5
NR1I3-230ENST00000511944 IGSF1Q8N6C5 1336 aa11.94□□□□□ -0.5
NR1I3-230ENST00000511944 PPM1GO15355 546 aaPredicted RBP11.94□□□□□ -0.5
NR1I3-230ENST00000511944 HOXC9P31274 260 aa11.94□□□□□ -0.5
NR1I3-230ENST00000511944 EIF4A2Q14240 407 aaKnown RBP11.94□□□□□ -0.5
NR1I3-230ENST00000511944 ARHGEF25Q86VW2 580 aa11.94□□□□□ -0.5
NR1I3-230ENST00000511944 WDR63Q8IWG1 891 aa11.94□□□□□ -0.5
NR1I3-230ENST00000511944 TCP11L2Q8N4U5 519 aa11.94□□□□□ -0.5
NR1I3-230ENST00000511944 LHX6Q9UPM6 363 aa11.94□□□□□ -0.5
NR1I3-230ENST00000511944 IL16Q14005 1332 aa11.93□□□□□ -0.5
NR1I3-230ENST00000511944 LTN1O94822 1766 aa11.93□□□□□ -0.5
NR1I3-230ENST00000511944 APAF1O14727 1248 aa11.93□□□□□ -0.5
NR1I3-230ENST00000511944 CAMTA1Q9Y6Y1 1673 aa11.93□□□□□ -0.5
NR1I3-230ENST00000511944 TESPA1A2RU30 521 aaPredicted RBP11.92□□□□□ -0.5
NR1I3-230ENST00000511944 E9PSI1 815 aa11.92□□□□□ -0.5
NR1I3-230ENST00000511944 LMOD3Q0VAK6 560 aa11.92□□□□□ -0.5
NR1I3-230ENST00000511944 FAM208AQ9UK61 1670 aaKnown RBP11.91□□□□□ -0.5
NR1I3-230ENST00000511944 CALD1Q05682 793 aaKnown RBP11.91□□□□□ -0.5
NR1I3-230ENST00000511944 HSP90AB2PQ58FF8 381 aa11.91□□□□□ -0.5
NR1I3-230ENST00000511944 WWC1Q8IX03 1113 aa11.91□□□□□ -0.5
NR1I3-230ENST00000511944 TRMT2AQ8IZ69 625 aaKnown RBP11.91□□□□□ -0.5
NR1I3-230ENST00000511944 DDX12PQ92771 950 aa11.91□□□□□ -0.5
NR1I3-230ENST00000511944 ROBO1Q9Y6N7 1651 aa11.91□□□□□ -0.5
NR1I3-230ENST00000511944 COL22A1Q8NFW1 1626 aaPredicted RBP11.9□□□□□ -0.5
NR1I3-230ENST00000511944 FBLN1P23142 703 aa11.9□□□□□ -0.5
NR1I3-230ENST00000511944 PRKAR2BP31323 418 aa11.9□□□□□ -0.5
NR1I3-230ENST00000511944 TMPOP42166 694 aaKnown RBP11.9□□□□□ -0.5
NR1I3-230ENST00000511944 PTGER2P43116 358 aa11.9□□□□□ -0.5
NR1I3-230ENST00000511944 NBR1Q14596 966 aa11.9□□□□□ -0.5
NR1I3-230ENST00000511944 CCDC146Q8IYE0 955 aa11.9□□□□□ -0.5
NR1I3-230ENST00000511944 POTEB3A0JP26 581 aa11.89□□□□□ -0.51
NR1I3-230ENST00000511944 TOM1O60784 492 aa11.89□□□□□ -0.51
NR1I3-230ENST00000511944 PRIM1P49642 420 aaKnown RBP11.89□□□□□ -0.51
NR1I3-230ENST00000511944 XPCQ01831 940 aaPredicted RBP11.89□□□□□ -0.51
NR1I3-230ENST00000511944 SLFN5Q08AF3 891 aa11.89□□□□□ -0.51
NR1I3-230ENST00000511944 NFE2L2Q16236 605 aa11.89□□□□□ -0.51
NR1I3-230ENST00000511944 POTEBQ6S5H4 581 aa11.89□□□□□ -0.51
NR1I3-230ENST00000511944 RNF123Q5XPI4 1314 aa11.88□□□□□ -0.51
NR1I3-230ENST00000511944 LMO7Q8WWI1 1683 aa11.88□□□□□ -0.51
NR1I3-230ENST00000511944 NUTM2GQ5VZR2 741 aa11.88□□□□□ -0.51
NR1I3-230ENST00000511944 ERICH6BQ5W0A0 696 aa11.88□□□□□ -0.51
NR1I3-230ENST00000511944 LRRC59Q96AG4 307 aaKnown RBP11.88□□□□□ -0.51
NR1I3-230ENST00000511944 MYH16Q9H6N6 1097 aa11.88□□□□□ -0.51
NR1I3-230ENST00000511944 ABCA3Q99758 1704 aa11.88□□□□□ -0.51
NR1I3-230ENST00000511944 GRXCR2A6NFK2 248 aa11.87□□□□□ -0.51
NR1I3-230ENST00000511944 CT47B1P0C2W7 299 aaPredicted RBP11.87□□□□□ -0.51
NR1I3-230ENST00000511944 DUSP27Q5VZP5 1158 aa11.87□□□□□ -0.51
NR1I3-230ENST00000511944 LMOD2Q6P5Q4 547 aa11.87□□□□□ -0.51
NR1I3-230ENST00000511944 PCDHGA10Q9Y5H3 936 aa11.87□□□□□ -0.51
NR1I3-230ENST00000511944 COL18A1P39060 1754 aa11.87□□□□□ -0.51
NR1I3-230ENST00000511944 HTATSF1O43719 755 aaKnown RBP11.86□□□□□ -0.51
NR1I3-230ENST00000511944 SULT6B1Q6IMI4 303 aa11.86□□□□□ -0.51
NR1I3-230ENST00000511944 EYA1Q99502 592 aa11.86□□□□□ -0.51
NR1I3-230ENST00000511944 ERBB3P21860 1342 aa11.86□□□□□ -0.51
NR1I3-230ENST00000511944 NEFLP07196 543 aa11.85□□□□□ -0.51
NR1I3-230ENST00000511944 FOSBP53539 338 aa11.85□□□□□ -0.51
NR1I3-230ENST00000511944 EMP3P54852 163 aa11.85□□□□□ -0.51
NR1I3-230ENST00000511944 GAS2L2Q8NHY3 880 aa11.85□□□□□ -0.51
NR1I3-230ENST00000511944 HMOX1P09601 288 aa11.84□□□□□ -0.51
NR1I3-230ENST00000511944 OSBPP22059 807 aa11.84□□□□□ -0.51
NR1I3-230ENST00000511944 RIPK4P57078 832 aa11.84□□□□□ -0.51
NR1I3-230ENST00000511944 DDX17Q92841 729 aaKnown RBP11.84□□□□□ -0.51
NR1I3-230ENST00000511944 COL16A1Q07092 1604 aaPredicted RBP11.84□□□□□ -0.51
NR1I3-230ENST00000511944 ZNF454Q8N9F8 522 aa11.83□□□□□ -0.52
NR1I3-230ENST00000511944 ANKRD24Q8TF21 1146 aa11.83□□□□□ -0.52
NR1I3-230ENST00000511944 OVOS2A0A0G2JMS6 1433 aa11.83□□□□□ -0.52
NR1I3-230ENST00000511944 KIAA0232Q92628 1395 aa11.82□□□□□ -0.52
NR1I3-230ENST00000511944 FAM205CA6NFA0 338 aa11.82□□□□□ -0.52
NR1I3-230ENST00000511944 AMOTQ4VCS5 1084 aa11.82□□□□□ -0.52
NR1I3-230ENST00000511944 ZNF428Q96B54 188 aa11.82□□□□□ -0.52
NR1I3-230ENST00000511944 CDCA7LQ96GN5 454 aa11.82□□□□□ -0.52
NR1I3-230ENST00000511944 PHACTR3Q96KR7 559 aa11.82□□□□□ -0.52
NR1I3-230ENST00000511944 RCAN3Q9UKA8 241 aa11.82□□□□□ -0.52
NR1I3-230ENST00000511944 SALL2Q9Y467 1007 aaPredicted RBP11.82□□□□□ -0.52
NR1I3-230ENST00000511944 PHLPP1O60346 1717 aa11.81□□□□□ -0.52
NR1I3-230ENST00000511944 PHF14O94880 888 aa11.81□□□□□ -0.52
NR1I3-230ENST00000511944 GNAI1P63096 354 aa11.81□□□□□ -0.52
NR1I3-230ENST00000511944 VARS2Q5ST30 1063 aaKnown RBP11.81□□□□□ -0.52
NR1I3-230ENST00000511944 AEBP1Q8IUX7 1158 aa11.81□□□□□ -0.52
NR1I3-230ENST00000511944 IFT57Q9NWB7 429 aa11.81□□□□□ -0.52
NR1I3-230ENST00000511944 BABAM1Q9NWV8 329 aa11.81□□□□□ -0.52
NR1I3-230ENST00000511944 GTF3C3Q9Y5Q9 886 aa11.81□□□□□ -0.52
NR1I3-230ENST00000511944 LRRC37A3O60309 1634 aa11.81□□□□□ -0.52
NR1I3-230ENST00000511944 COL14A1Q05707 1796 aaKnown RBP11.8□□□□□ -0.52
NR1I3-230ENST00000511944 PRDM11Q9NQV5 511 aa11.8□□□□□ -0.52
NR1I3-230ENST00000511944 RRP7AQ9Y3A4 280 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms