RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 ATP7AQ04656 1500 aa17.82■□□□□ 0.44
USP38-202ENST00000510377 SF3A1Q15459 793 aaKnown RBP17.81■□□□□ 0.44
USP38-202ENST00000510377 CCDC183Q5T5S1 534 aa17.81■□□□□ 0.44
USP38-202ENST00000510377 ANKLE2Q86XL3 938 aa17.81■□□□□ 0.44
USP38-202ENST00000510377 ZHX1Q9UKY1 873 aaPredicted RBP17.81■□□□□ 0.44
USP38-202ENST00000510377 PTPRCP08575 1304 aa17.81■□□□□ 0.44
USP38-202ENST00000510377 ZNF445P59923 1031 aa17.81■□□□□ 0.44
USP38-202ENST00000510377 PUS7Q96PZ0 661 aaKnown RBP17.81■□□□□ 0.44
USP38-202ENST00000510377 CCDC192P0DO97 292 aa17.8■□□□□ 0.44
USP38-202ENST00000510377 CPA1P15085 419 aa17.8■□□□□ 0.44
USP38-202ENST00000510377 IL13P35225 146 aa17.8■□□□□ 0.44
USP38-202ENST00000510377 CKAP2LQ8IYA6 745 aa17.8■□□□□ 0.44
USP38-202ENST00000510377 GPT2Q8TD30 523 aa17.8■□□□□ 0.44
USP38-202ENST00000510377 TSC1Q92574 1164 aa17.8■□□□□ 0.44
USP38-202ENST00000510377 E9PCH4 1651 aa17.8■□□□□ 0.44
USP38-202ENST00000510377 IQGAP3Q86VI3 1631 aa17.8■□□□□ 0.44
USP38-202ENST00000510377 HSP90AB4PQ58FF6 505 aa17.8■□□□□ 0.44
USP38-202ENST00000510377 KIF3AQ9Y496 699 aa17.8■□□□□ 0.44
USP38-202ENST00000510377 LETM1O95202 739 aaPredicted RBP17.79■□□□□ 0.44
USP38-202ENST00000510377 NOL7Q9UMY1 257 aaKnown RBP17.79■□□□□ 0.44
USP38-202ENST00000510377 GADD45BO75293 160 aaPredicted RBP17.79■□□□□ 0.44
USP38-202ENST00000510377 ATF3P18847 181 aa17.79■□□□□ 0.44
USP38-202ENST00000510377 TCEANC2Q96MN5 208 aa17.79■□□□□ 0.44
USP38-202ENST00000510377 PSME1Q06323 249 aa17.79■□□□□ 0.44
USP38-202ENST00000510377 RNF20Q5VTR2 975 aa17.79■□□□□ 0.44
USP38-202ENST00000510377 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.79■□□□□ 0.44
USP38-202ENST00000510377 CDK11BP21127 795 aaKnown RBP17.79■□□□□ 0.44
USP38-202ENST00000510377 GNL2Q13823 731 aaKnown RBP17.79■□□□□ 0.44
USP38-202ENST00000510377 TFIP11Q9UBB9 837 aaKnown RBP17.79■□□□□ 0.44
USP38-202ENST00000510377 TPD52L1Q16890 204 aaPredicted RBP17.78■□□□□ 0.44
USP38-202ENST00000510377 ABTB2Q8N961 1025 aa17.78■□□□□ 0.44
USP38-202ENST00000510377 PPP1R9BQ96SB3 815 aa17.78■□□□□ 0.44
USP38-202ENST00000510377 TNMDQ9H2S6 317 aa17.78■□□□□ 0.44
USP38-202ENST00000510377 ABCC4O15439 1325 aa17.78■□□□□ 0.44
USP38-202ENST00000510377 STX6O43752 255 aa17.78■□□□□ 0.44
USP38-202ENST00000510377 PPP1R42Q7Z4L9 355 aa17.78■□□□□ 0.44
USP38-202ENST00000510377 NECAB1Q8N987 351 aa17.78■□□□□ 0.44
USP38-202ENST00000510377 KIF2CQ99661 725 aa17.78■□□□□ 0.44
USP38-202ENST00000510377 NPATQ14207 1427 aa17.78■□□□□ 0.44
USP38-202ENST00000510377 C1orf141Q5JVX7 400 aa17.78■□□□□ 0.44
USP38-202ENST00000510377 AACSQ86V21 672 aa17.78■□□□□ 0.44
USP38-202ENST00000510377 CLTCL1P53675 1640 aa17.77■□□□□ 0.44
USP38-202ENST00000510377 MYO5CQ9NQX4 1742 aa17.77■□□□□ 0.44
USP38-202ENST00000510377 KRT85P78386 507 aa17.77■□□□□ 0.44
USP38-202ENST00000510377 TAF7Q15545 349 aaPredicted RBP17.77■□□□□ 0.44
USP38-202ENST00000510377 HDAC5Q9UQL6 1122 aa17.77■□□□□ 0.44
USP38-202ENST00000510377 MADDQ8WXG6 1647 aa17.77■□□□□ 0.44
USP38-202ENST00000510377 SPDYE4A6NLX3 237 aa17.77■□□□□ 0.43
USP38-202ENST00000510377 PALD1Q9ULE6 856 aa17.77■□□□□ 0.43
USP38-202ENST00000510377 LIMCH1Q9UPQ0 1083 aa17.77■□□□□ 0.43
USP38-202ENST00000510377 CDC42BPBQ9Y5S2 1711 aa17.76■□□□□ 0.43
USP38-202ENST00000510377 NSFL1CQ9UNZ2 370 aaKnown RBP17.76■□□□□ 0.43
USP38-202ENST00000510377 UNC13BO14795 1591 aa17.76■□□□□ 0.43
USP38-202ENST00000510377 NUP62CLQ9H1M0 184 aa17.76■□□□□ 0.43
USP38-202ENST00000510377 CHMLP26374 656 aa17.76■□□□□ 0.43
USP38-202ENST00000510377 DDX11Q96FC9 970 aa17.76■□□□□ 0.43
USP38-202ENST00000510377 FMNL2Q96PY5 1086 aa17.76■□□□□ 0.43
USP38-202ENST00000510377 CLASP1Q7Z460 1538 aa17.76■□□□□ 0.43
USP38-202ENST00000510377 A0A0U1RQG5 324 aaPredicted RBP17.75■□□□□ 0.43
USP38-202ENST00000510377 CHMP4AQ9BY43 222 aa17.75■□□□□ 0.43
USP38-202ENST00000510377 DYNC1I1O14576 645 aa17.75■□□□□ 0.43
USP38-202ENST00000510377 PPFIA3O75145 1194 aa17.75■□□□□ 0.43
USP38-202ENST00000510377 GJB2P29033 226 aa17.75■□□□□ 0.43
USP38-202ENST00000510377 NOLC1Q14978 699 aaKnown RBP eCLIP17.75■□□□□ 0.43
USP38-202ENST00000510377 GNAT3A8MTJ3 354 aa17.75■□□□□ 0.43
USP38-202ENST00000510377 GORABQ5T7V8 394 aa17.75■□□□□ 0.43
USP38-202ENST00000510377 KIF1BPQ96EK5 621 aa17.75■□□□□ 0.43
USP38-202ENST00000510377 MCM5P33992 734 aa17.74■□□□□ 0.43
USP38-202ENST00000510377 DNAJC2Q99543 621 aaKnown RBP17.74■□□□□ 0.43
USP38-202ENST00000510377 MTHFSDQ2M296 383 aaKnown RBP17.74■□□□□ 0.43
USP38-202ENST00000510377 PNMA6EA0A0J9YXQ4 647 aa17.74■□□□□ 0.43
USP38-202ENST00000510377 DNM1Q05193 864 aaKnown RBP17.74■□□□□ 0.43
USP38-202ENST00000510377 PDCL2Q8N4E4 241 aa17.74■□□□□ 0.43
USP38-202ENST00000510377 SPATA32Q96LK8 384 aa17.74■□□□□ 0.43
USP38-202ENST00000510377 KDM4AO75164 1064 aa17.74■□□□□ 0.43
USP38-202ENST00000510377 YTHDC2Q9H6S0 1430 aaKnown RBP17.74■□□□□ 0.43
USP38-202ENST00000510377 RIMS2Q9UQ26 1411 aa17.73■□□□□ 0.43
USP38-202ENST00000510377 RAB11FIP3O75154 756 aa17.73■□□□□ 0.43
USP38-202ENST00000510377 BLOC1S2Q6QNY1 142 aa17.73■□□□□ 0.43
USP38-202ENST00000510377 RIC3Q7Z5B4 369 aa17.73■□□□□ 0.43
USP38-202ENST00000510377 ACEP12821 1306 aa17.73■□□□□ 0.43
USP38-202ENST00000510377 ZSCAN22P10073 491 aaPredicted RBP17.73■□□□□ 0.43
USP38-202ENST00000510377 NCBP3Q53F19 620 aaKnown RBP17.73■□□□□ 0.43
USP38-202ENST00000510377 FILIP1Q7Z7B0 1213 aa17.73■□□□□ 0.43
USP38-202ENST00000510377 C16orf45Q96MC5 204 aaPredicted RBP17.73■□□□□ 0.43
USP38-202ENST00000510377 CCDC8Q9H0W5 538 aaPredicted RBP17.73■□□□□ 0.43
USP38-202ENST00000510377 PSMA5P28066 241 aa17.73■□□□□ 0.43
USP38-202ENST00000510377 NEXNQ0ZGT2 675 aa17.73■□□□□ 0.43
USP38-202ENST00000510377 HS1BP3Q53T59 392 aa17.73■□□□□ 0.43
USP38-202ENST00000510377 ABCC1P33527 1531 aa17.73■□□□□ 0.43
USP38-202ENST00000510377 MAP3K11Q16584 847 aa17.72■□□□□ 0.43
USP38-202ENST00000510377 BOLA2Q9H3K6 86 aa17.72■□□□□ 0.43
USP38-202ENST00000510377 PDCP20941 246 aa17.72■□□□□ 0.43
USP38-202ENST00000510377 ESCO1Q5FWF5 840 aa17.72■□□□□ 0.43
USP38-202ENST00000510377 CCDC73Q6ZRK6 1079 aa17.72■□□□□ 0.43
USP38-202ENST00000510377 ERCC6L2Q5T890 1561 aa17.72■□□□□ 0.43
USP38-202ENST00000510377 PPP4R3BQ5MIZ7 849 aa17.72■□□□□ 0.43
USP38-202ENST00000510377 RHPN1Q8TCX5 695 aa17.72■□□□□ 0.43
USP38-202ENST00000510377 NEUROD6Q96NK8 337 aa17.72■□□□□ 0.43
USP38-202ENST00000510377 AK2P54819 239 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms