RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 MAP3K5Q99683 1374 aa13.96□□□□□ -0.18
PFDN1-203ENST00000510217 LOC102724428A0A0B4J2F2 783 aa13.95□□□□□ -0.18
PFDN1-203ENST00000510217 HSP90AB1P08238 724 aaKnown RBP13.95□□□□□ -0.18
PFDN1-203ENST00000510217 SIK1P57059 783 aa13.95□□□□□ -0.18
PFDN1-203ENST00000510217 DCAF5Q96JK2 942 aa13.95□□□□□ -0.18
PFDN1-203ENST00000510217 FHDC1Q9C0D6 1143 aaPredicted RBP13.95□□□□□ -0.18
PFDN1-203ENST00000510217 FOXD4L1Q9NU39 408 aa13.95□□□□□ -0.18
PFDN1-203ENST00000510217 AMIGO3Q86WK7 504 aa13.94□□□□□ -0.18
PFDN1-203ENST00000510217 COL23A1Q86Y22 540 aaPredicted RBP13.94□□□□□ -0.18
PFDN1-203ENST00000510217 LINC00116Q8NCU8 138 aa13.94□□□□□ -0.18
PFDN1-203ENST00000510217 ARXQ96QS3 562 aa13.94□□□□□ -0.18
PFDN1-203ENST00000510217 ATG3Q9NT62 314 aa13.94□□□□□ -0.18
PFDN1-203ENST00000510217 TJP1Q07157 1748 aa13.93□□□□□ -0.18
PFDN1-203ENST00000510217 ERVV-2B6SEH9 535 aa13.93□□□□□ -0.18
PFDN1-203ENST00000510217 ITPK1Q13572 414 aa13.93□□□□□ -0.18
PFDN1-203ENST00000510217 CNGB1Q14028 1251 aaPredicted RBP13.93□□□□□ -0.18
PFDN1-203ENST00000510217 C1orf141Q5JVX7 400 aa13.93□□□□□ -0.18
PFDN1-203ENST00000510217 DIAPH1O60610 1272 aaKnown RBP13.92□□□□□ -0.18
PFDN1-203ENST00000510217 HMOX1P09601 288 aa13.92□□□□□ -0.18
PFDN1-203ENST00000510217 AK7Q96M32 723 aa13.92□□□□□ -0.18
PFDN1-203ENST00000510217 SYT17Q9BSW7 474 aa13.92□□□□□ -0.18
PFDN1-203ENST00000510217 RNF216Q9NWF9 866 aaPredicted RBP13.92□□□□□ -0.18
PFDN1-203ENST00000510217 C4AP0C0L4 1744 aa13.91□□□□□ -0.18
PFDN1-203ENST00000510217 HMGB2P26583 209 aaKnown RBP13.91□□□□□ -0.18
PFDN1-203ENST00000510217 POLD1P28340 1107 aa13.91□□□□□ -0.18
PFDN1-203ENST00000510217 ATP6V1AP38606 617 aa13.9□□□□□ -0.18
PFDN1-203ENST00000510217 MSL1Q68DK7 614 aa13.9□□□□□ -0.18
PFDN1-203ENST00000510217 SLC4A9Q96Q91 983 aa13.9□□□□□ -0.18
PFDN1-203ENST00000510217 PHF14O94880 888 aa13.89□□□□□ -0.19
PFDN1-203ENST00000510217 CABP4P57796 275 aa13.89□□□□□ -0.19
PFDN1-203ENST00000510217 AKAP4Q5JQC9 854 aa13.89□□□□□ -0.19
PFDN1-203ENST00000510217 SMIM5Q71RC9 77 aa13.89□□□□□ -0.19
PFDN1-203ENST00000510217 FLAD1Q8NFF5 587 aa13.89□□□□□ -0.19
PFDN1-203ENST00000510217 SIPA1L3O60292 1781 aaPredicted RBP13.88□□□□□ -0.19
PFDN1-203ENST00000510217 UBR2Q8IWV8 1755 aa13.88□□□□□ -0.19
PFDN1-203ENST00000510217 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.88□□□□□ -0.19
PFDN1-203ENST00000510217 SSFA2P28290 1259 aa13.88□□□□□ -0.19
PFDN1-203ENST00000510217 MYH14Q7Z406 1995 aaKnown RBP13.88□□□□□ -0.19
PFDN1-203ENST00000510217 KCPQ6ZWJ8 1503 aa13.88□□□□□ -0.19
PFDN1-203ENST00000510217 ZNF316A6NFI3 1004 aaPredicted RBP13.87□□□□□ -0.19
PFDN1-203ENST00000510217 GNPATO15228 680 aa13.87□□□□□ -0.19
PFDN1-203ENST00000510217 MTHFSDQ2M296 383 aaKnown RBP13.87□□□□□ -0.19
PFDN1-203ENST00000510217 NFATC2IPQ8NCF5 419 aa13.87□□□□□ -0.19
PFDN1-203ENST00000510217 RBM42Q9BTD8 480 aaKnown RBP13.87□□□□□ -0.19
PFDN1-203ENST00000510217 U2SURPO15042 1029 aaKnown RBP13.86□□□□□ -0.19
PFDN1-203ENST00000510217 DIEXFQ68CQ4 756 aaKnown RBP13.86□□□□□ -0.19
PFDN1-203ENST00000510217 SLC52A2Q9HAB3 445 aa13.86□□□□□ -0.19
PFDN1-203ENST00000510217 LGR6Q9HBX8 967 aa13.86□□□□□ -0.19
PFDN1-203ENST00000510217 CNTNAP4Q9C0A0 1308 aa13.86□□□□□ -0.19
PFDN1-203ENST00000510217 RNMTO43148 476 aaKnown RBP13.85□□□□□ -0.19
PFDN1-203ENST00000510217 PPP2R1AP30153 589 aa13.85□□□□□ -0.19
PFDN1-203ENST00000510217 KLHL34Q8N239 644 aa13.85□□□□□ -0.19
PFDN1-203ENST00000510217 NLGN2Q8NFZ4 835 aa13.85□□□□□ -0.19
PFDN1-203ENST00000510217 DCAF8L1A6NGE4 600 aa13.84□□□□□ -0.19
PFDN1-203ENST00000510217 PTCD1O75127 700 aaKnown RBP13.84□□□□□ -0.19
PFDN1-203ENST00000510217 CFAP53Q96M91 514 aa13.84□□□□□ -0.19
PFDN1-203ENST00000510217 CHD4Q14839 1912 aa13.84□□□□□ -0.19
PFDN1-203ENST00000510217 UTRNP46939 3433 aa13.83□□□□□ -0.19
PFDN1-203ENST00000510217 YY1P25490 414 aa13.83□□□□□ -0.2
PFDN1-203ENST00000510217 KIF13BQ9NQT8 1826 aa13.83□□□□□ -0.2
PFDN1-203ENST00000510217 KIAA1551Q9HCM1 1747 aa13.82□□□□□ -0.2
PFDN1-203ENST00000510217 RC3H1Q5TC82 1133 aaKnown RBP13.82□□□□□ -0.2
PFDN1-203ENST00000510217 RSPH6AQ9H0K4 717 aa13.82□□□□□ -0.2
PFDN1-203ENST00000510217 RTCBQ9Y3I0 505 aaKnown RBP13.82□□□□□ -0.2
PFDN1-203ENST00000510217 GAS2L2Q8NHY3 880 aa13.81□□□□□ -0.2
PFDN1-203ENST00000510217 PRKAR2BP31323 418 aa13.8□□□□□ -0.2
PFDN1-203ENST00000510217 CRKLP46109 303 aaKnown RBP13.8□□□□□ -0.2
PFDN1-203ENST00000510217 SLC39A6Q13433 755 aa13.8□□□□□ -0.2
PFDN1-203ENST00000510217 CEMIPQ8WUJ3 1361 aa13.8□□□□□ -0.2
PFDN1-203ENST00000510217 RPS6KA4O75676 772 aa13.79□□□□□ -0.2
PFDN1-203ENST00000510217 ARHGEF1Q92888 912 aaKnown RBP13.79□□□□□ -0.2
PFDN1-203ENST00000510217 PHACTR3Q96KR7 559 aa13.79□□□□□ -0.2
PFDN1-203ENST00000510217 GNAT3A8MTJ3 354 aa13.78□□□□□ -0.2
PFDN1-203ENST00000510217 TRAPPC3LQ5T215 181 aa13.78□□□□□ -0.2
PFDN1-203ENST00000510217 DNAJC10Q8IXB1 793 aa13.78□□□□□ -0.2
PFDN1-203ENST00000510217 IL17REQ8NFR9 667 aa13.78□□□□□ -0.2
PFDN1-203ENST00000510217 NUDCQ9Y266 331 aa13.78□□□□□ -0.2
PFDN1-203ENST00000510217 CD2APQ9Y5K6 639 aa13.78□□□□□ -0.2
PFDN1-203ENST00000510217 GOLGB1Q14789 3259 aaKnown RBP13.78□□□□□ -0.2
PFDN1-203ENST00000510217 MMP10P09238 476 aa13.77□□□□□ -0.21
PFDN1-203ENST00000510217 U2AF1L5P0DN76 240 aaPredicted RBP13.77□□□□□ -0.21
PFDN1-203ENST00000510217 GYS1P13807 737 aa13.77□□□□□ -0.21
PFDN1-203ENST00000510217 YBX3P16989 372 aaKnown RBP eCLIP13.77□□□□□ -0.216e-9■■□□□ 12.6
PFDN1-203ENST00000510217 U2AF1Q01081 240 aaKnown RBP eCLIP13.77□□□□□ -0.21
PFDN1-203ENST00000510217 GPR162Q16538 588 aa13.77□□□□□ -0.21
PFDN1-203ENST00000510217 INTS5Q6P9B9 1019 aaKnown RBP13.77□□□□□ -0.21
PFDN1-203ENST00000510217 C10orf71Q711Q0 1435 aa13.77□□□□□ -0.21
PFDN1-203ENST00000510217 DLG5Q8TDM6 1919 aa13.77□□□□□ -0.21
PFDN1-203ENST00000510217 N4BP2Q86UW6 1770 aaPredicted RBP13.76□□□□□ -0.21
PFDN1-203ENST00000510217 SCN7AQ01118 1682 aa13.76□□□□□ -0.21
PFDN1-203ENST00000510217 USP42Q9H9J4 1324 aaKnown RBP13.76□□□□□ -0.21
PFDN1-203ENST00000510217 PELP1Q8IZL8 1130 aaKnown RBP13.76□□□□□ -0.21
PFDN1-203ENST00000510217 PXDNLA1KZ92 1463 aa13.75□□□□□ -0.21
PFDN1-203ENST00000510217 SOS1Q07889 1333 aaPredicted RBP13.75□□□□□ -0.21
PFDN1-203ENST00000510217 CYP19A1P11511 503 aaPredicted RBP13.75□□□□□ -0.21
PFDN1-203ENST00000510217 RFC4P35249 363 aa13.75□□□□□ -0.21
PFDN1-203ENST00000510217 TEFQ10587 303 aa13.75□□□□□ -0.21
PFDN1-203ENST00000510217 CCDC87Q9NVE4 849 aa13.75□□□□□ -0.21
PFDN1-203ENST00000510217 SRP68Q9UHB9 627 aaKnown RBP13.75□□□□□ -0.21
PFDN1-203ENST00000510217 BRCA1P38398 1863 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms