RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 FAM161AQ3B820 660 aa6.07□□□□□ -1.44
PDLIM5-214ENST00000510099 ITPRIPQ8IWB1 547 aa6.07□□□□□ -1.44
PDLIM5-214ENST00000510099 TMEM57Q8N5G2 664 aa6.07□□□□□ -1.44
PDLIM5-214ENST00000510099 TSPYL6Q8N831 410 aa6.07□□□□□ -1.44
PDLIM5-214ENST00000510099 GAS2L2Q8NHY3 880 aa6.07□□□□□ -1.44
PDLIM5-214ENST00000510099 EYA1Q99502 592 aa6.07□□□□□ -1.44
PDLIM5-214ENST00000510099 RWDD1Q9H446 243 aaPredicted RBP6.07□□□□□ -1.44
PDLIM5-214ENST00000510099 LAS1LQ9Y4W2 734 aaKnown RBP6.07□□□□□ -1.44
PDLIM5-214ENST00000510099 TRPM3Q9HCF6 1732 aaPredicted RBP6.07□□□□□ -1.44
PDLIM5-214ENST00000510099 LMTK3Q96Q04 1460 aa6.07□□□□□ -1.44
PDLIM5-214ENST00000510099 NCOA3Q9Y6Q9 1424 aa6.07□□□□□ -1.44
PDLIM5-214ENST00000510099 MED1Q15648 1581 aaPredicted RBP6.06□□□□□ -1.44
PDLIM5-214ENST00000510099 RGS3P49796 1198 aa6.06□□□□□ -1.44
PDLIM5-214ENST00000510099 HAP1P54257 671 aaPredicted RBP6.06□□□□□ -1.44
PDLIM5-214ENST00000510099 DCTN1Q14203 1278 aa6.06□□□□□ -1.44
PDLIM5-214ENST00000510099 MTHFSDQ2M296 383 aaKnown RBP6.06□□□□□ -1.44
PDLIM5-214ENST00000510099 ABTB2Q8N961 1025 aa6.06□□□□□ -1.44
PDLIM5-214ENST00000510099 C8orf58Q8NAV2 365 aa6.06□□□□□ -1.44
PDLIM5-214ENST00000510099 IPO9Q96P70 1041 aaKnown RBP6.06□□□□□ -1.44
PDLIM5-214ENST00000510099 ZBTB40Q9NUA8 1239 aa6.06□□□□□ -1.44
PDLIM5-214ENST00000510099 NOP58Q9Y2X3 529 aaKnown RBP6.06□□□□□ -1.44
PDLIM5-214ENST00000510099 CAMTA1Q9Y6Y1 1673 aa6.06□□□□□ -1.44
PDLIM5-214ENST00000510099 MAP3K5Q99683 1374 aa6.06□□□□□ -1.44
PDLIM5-214ENST00000510099 FAM205CA6NFA0 338 aa6.05□□□□□ -1.44
PDLIM5-214ENST00000510099 HTATSF1O43719 755 aaKnown RBP6.05□□□□□ -1.44
PDLIM5-214ENST00000510099 ESCO1Q5FWF5 840 aa6.05□□□□□ -1.44
PDLIM5-214ENST00000510099 NUTM2GQ5VZR2 741 aa6.05□□□□□ -1.44
PDLIM5-214ENST00000510099 MCM10Q7L590 875 aa6.05□□□□□ -1.44
PDLIM5-214ENST00000510099 KCNH5Q8NCM2 988 aa6.05□□□□□ -1.44
PDLIM5-214ENST00000510099 IP6K1Q92551 441 aa6.05□□□□□ -1.44
PDLIM5-214ENST00000510099 RBM33Q96EV2 1170 aaKnown RBP6.05□□□□□ -1.44
PDLIM5-214ENST00000510099 API5Q9BZZ5 524 aaKnown RBP6.05□□□□□ -1.44
PDLIM5-214ENST00000510099 PDZRN3Q9UPQ7 1066 aa6.05□□□□□ -1.44
PDLIM5-214ENST00000510099 TMEM94Q12767 1356 aa6.05□□□□□ -1.44
PDLIM5-214ENST00000510099 LTN1O94822 1766 aa6.04□□□□□ -1.44
PDLIM5-214ENST00000510099 FOXO3O43524 673 aa6.04□□□□□ -1.44
PDLIM5-214ENST00000510099 C14orf37Q86TY3 774 aa6.04□□□□□ -1.44
PDLIM5-214ENST00000510099 SMC5Q8IY18 1101 aa6.04□□□□□ -1.44
PDLIM5-214ENST00000510099 HS3ST6Q96QI5 342 aa6.04□□□□□ -1.44
PDLIM5-214ENST00000510099 CHMP4BQ9H444 224 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-214ENST00000510099 OVOS2A0A0G2JMS6 1433 aa6.04□□□□□ -1.44
PDLIM5-214ENST00000510099 CEMIPQ8WUJ3 1361 aa6.04□□□□□ -1.44
PDLIM5-214ENST00000510099 ABCC6O95255 1503 aa6.04□□□□□ -1.44
PDLIM5-214ENST00000510099 LMO7Q8WWI1 1683 aa6.04□□□□□ -1.44
PDLIM5-214ENST00000510099 ALS2Q96Q42 1657 aa6.04□□□□□ -1.44
PDLIM5-214ENST00000510099 VIRMAQ69YN4 1812 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-214ENST00000510099 PTPRCP08575 1304 aa6.03□□□□□ -1.44
PDLIM5-214ENST00000510099 SOS1Q07889 1333 aaPredicted RBP6.03□□□□□ -1.44
PDLIM5-214ENST00000510099 ATP10DQ9P241 1426 aa6.03□□□□□ -1.44
PDLIM5-214ENST00000510099 PSME1Q06323 249 aa6.03□□□□□ -1.44
PDLIM5-214ENST00000510099 MKRN3Q13064 507 aaKnown RBP6.03□□□□□ -1.44
PDLIM5-214ENST00000510099 KRT24Q2M2I5 525 aa6.03□□□□□ -1.44
PDLIM5-214ENST00000510099 ERICH6Q7L0X2 663 aa6.03□□□□□ -1.44
PDLIM5-214ENST00000510099 ARHGEF25Q86VW2 580 aa6.03□□□□□ -1.44
PDLIM5-214ENST00000510099 PROSER2Q86WR7 435 aaPredicted RBP6.03□□□□□ -1.44
PDLIM5-214ENST00000510099 RTF1Q92541 710 aaKnown RBP6.03□□□□□ -1.44
PDLIM5-214ENST00000510099 ORAI2Q96SN7 254 aa6.03□□□□□ -1.44
PDLIM5-214ENST00000510099 C19orf44Q9H6X5 657 aa6.03□□□□□ -1.44
PDLIM5-214ENST00000510099 BABAM1Q9NWV8 329 aa6.03□□□□□ -1.44
PDLIM5-214ENST00000510099 FAM208AQ9UK61 1670 aaKnown RBP6.03□□□□□ -1.44
PDLIM5-214ENST00000510099 STRCP1A6NGW2 1772 aa6.03□□□□□ -1.44
PDLIM5-214ENST00000510099 TNS3Q68CZ2 1445 aa6.02□□□□□ -1.45
PDLIM5-214ENST00000510099 GNAT3A8MTJ3 354 aa6.02□□□□□ -1.45
PDLIM5-214ENST00000510099 ELL2O00472 640 aaPredicted RBP6.02□□□□□ -1.45
PDLIM5-214ENST00000510099 ZBTB7BO15156 539 aaPredicted RBP6.02□□□□□ -1.45
PDLIM5-214ENST00000510099 MYT1Q01538 1121 aa6.02□□□□□ -1.45
PDLIM5-214ENST00000510099 INTS3Q68E01 1043 aaKnown RBP6.02□□□□□ -1.45
PDLIM5-214ENST00000510099 NPM2Q86SE8 214 aaKnown RBP6.02□□□□□ -1.45
PDLIM5-214ENST00000510099 DDRGK1Q96HY6 314 aa6.02□□□□□ -1.45
PDLIM5-214ENST00000510099 TSPYL4Q9UJ04 414 aa6.02□□□□□ -1.45
PDLIM5-214ENST00000510099 PLEKHG2Q9H7P9 1386 aa6.02□□□□□ -1.45
PDLIM5-214ENST00000510099 PXDNQ92626 1479 aa6.02□□□□□ -1.45
PDLIM5-214ENST00000510099 POTEB3A0JP26 581 aa6.01□□□□□ -1.45
PDLIM5-214ENST00000510099 GCP02774 474 aa6.01□□□□□ -1.45
PDLIM5-214ENST00000510099 NUCB1Q02818 461 aa6.01□□□□□ -1.45
PDLIM5-214ENST00000510099 NBPF6Q5VWK0 638 aa6.01□□□□□ -1.45
PDLIM5-214ENST00000510099 POTEBQ6S5H4 581 aa6.01□□□□□ -1.45
PDLIM5-214ENST00000510099 USHBP1Q8N6Y0 703 aa6.01□□□□□ -1.45
PDLIM5-214ENST00000510099 PDCD7Q8N8D1 485 aaKnown RBP6.01□□□□□ -1.45
PDLIM5-214ENST00000510099 LTV1Q96GA3 475 aaPredicted RBP6.01□□□□□ -1.45
PDLIM5-214ENST00000510099 L3MBTL3Q96JM7 780 aaPredicted RBP6.01□□□□□ -1.45
PDLIM5-214ENST00000510099 NBPF4Q96M43 638 aa6.01□□□□□ -1.45
PDLIM5-214ENST00000510099 KRTAP3-3Q9BYR6 98 aa6.01□□□□□ -1.45
PDLIM5-214ENST00000510099 KRTAP3-2Q9BYR7 98 aa6.01□□□□□ -1.45
PDLIM5-214ENST00000510099 PXDNLA1KZ92 1463 aa6.01□□□□□ -1.45
PDLIM5-214ENST00000510099 XPCQ01831 940 aaPredicted RBP6□□□□□ -1.45
PDLIM5-214ENST00000510099 KRT28Q7Z3Y7 464 aa6□□□□□ -1.45
PDLIM5-214ENST00000510099 IL17REQ8NFR9 667 aa6□□□□□ -1.45
PDLIM5-214ENST00000510099 GCC1Q96CN9 775 aa6□□□□□ -1.45
PDLIM5-214ENST00000510099 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6□□□□□ -1.453e-9■■□□□ 13
PDLIM5-214ENST00000510099 ADAMTS7Q9UKP4 1686 aa6□□□□□ -1.45
PDLIM5-214ENST00000510099 ERBB3P21860 1342 aa5.99□□□□□ -1.45
PDLIM5-214ENST00000510099 NPHP3Q7Z494 1330 aa5.99□□□□□ -1.45
PDLIM5-214ENST00000510099 CRYBG1Q9Y4K1 1723 aa5.99□□□□□ -1.45
PDLIM5-214ENST00000510099 KDM3BQ7LBC6 1761 aa5.99□□□□□ -1.45
PDLIM5-214ENST00000510099 N4BP2Q86UW6 1770 aaPredicted RBP5.99□□□□□ -1.45
PDLIM5-214ENST00000510099 HOXB7P09629 217 aa5.99□□□□□ -1.45
PDLIM5-214ENST00000510099 ATF3P18847 181 aa5.99□□□□□ -1.45
PDLIM5-214ENST00000510099 TAF7Q15545 349 aaPredicted RBP5.99□□□□□ -1.45
PDLIM5-214ENST00000510099 AMOTQ4VCS5 1084 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms