RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 SLC4A9Q96Q91 983 aa28.73■■■□□ 2.19
LIN54-208ENST00000509748 MSH5O43196 834 aa28.72■■■□□ 2.19
LIN54-208ENST00000509748 POLD1P28340 1107 aa28.72■■■□□ 2.19
LIN54-208ENST00000509748 C1orf141Q5JVX7 400 aa28.72■■■□□ 2.19
LIN54-208ENST00000509748 FLAD1Q8NFF5 587 aa28.72■■■□□ 2.19
LIN54-208ENST00000509748 ATP6V1AP38606 617 aa28.71■■■□□ 2.19
LIN54-208ENST00000509748 CABP4P57796 275 aa28.71■■■□□ 2.19
LIN54-208ENST00000509748 SMIM5Q71RC9 77 aa28.71■■■□□ 2.19
LIN54-208ENST00000509748 AK7Q96M32 723 aa28.7■■■□□ 2.18
LIN54-208ENST00000509748 SCN11AQ9UI33 1791 aa28.69■■■□□ 2.18
LIN54-208ENST00000509748 AKAP4Q5JQC9 854 aa28.68■■■□□ 2.18
LIN54-208ENST00000509748 NFATC2IPQ8NCF5 419 aa28.68■■■□□ 2.18
LIN54-208ENST00000509748 ZNF831Q5JPB2 1677 aa28.67■■■□□ 2.18
LIN54-208ENST00000509748 MSL1Q68DK7 614 aa28.67■■■□□ 2.18
LIN54-208ENST00000509748 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.66■■■□□ 2.18
LIN54-208ENST00000509748 DCAF8L1A6NGE4 600 aa28.66■■■□□ 2.18
LIN54-208ENST00000509748 MTHFSDQ2M296 383 aaKnown RBP28.65■■■□□ 2.18
LIN54-208ENST00000509748 LGR6Q9HBX8 967 aa28.65■■■□□ 2.18
LIN54-208ENST00000509748 SSFA2P28290 1259 aa28.64■■■□□ 2.18
LIN54-208ENST00000509748 RBM42Q9BTD8 480 aaKnown RBP28.64■■■□□ 2.18
LIN54-208ENST00000509748 PHF14O94880 888 aa28.63■■■□□ 2.17
LIN54-208ENST00000509748 UTRNP46939 3433 aa28.61■■■□□ 2.17
LIN54-208ENST00000509748 GNPATO15228 680 aa28.61■■■□□ 2.17
LIN54-208ENST00000509748 RNMTO43148 476 aaKnown RBP28.61■■■□□ 2.17
LIN54-208ENST00000509748 COL5A3P25940 1745 aaPredicted RBP28.6■■■□□ 2.17
LIN54-208ENST00000509748 ADAMTS7Q9UKP4 1686 aa28.6■■■□□ 2.17
LIN54-208ENST00000509748 VIRMAQ69YN4 1812 aaKnown RBP28.59■■■□□ 2.17
LIN54-208ENST00000509748 U2SURPO15042 1029 aaKnown RBP28.59■■■□□ 2.17
LIN54-208ENST00000509748 PPP2R1AP30153 589 aa28.59■■■□□ 2.17
LIN54-208ENST00000509748 RC3H1Q5TC82 1133 aaKnown RBP28.59■■■□□ 2.17
LIN54-208ENST00000509748 KLHL34Q8N239 644 aa28.59■■■□□ 2.17
LIN54-208ENST00000509748 NLGN2Q8NFZ4 835 aa28.59■■■□□ 2.17
LIN54-208ENST00000509748 SLC52A2Q9HAB3 445 aa28.59■■■□□ 2.17
LIN54-208ENST00000509748 MYH14Q7Z406 1995 aaKnown RBP28.59■■■□□ 2.17
LIN54-208ENST00000509748 PTCD1O75127 700 aaKnown RBP28.58■■■□□ 2.17
LIN54-208ENST00000509748 YY1P25490 414 aa28.58■■■□□ 2.17
LIN54-208ENST00000509748 MRC1P22897 1456 aa28.58■■■□□ 2.17
LIN54-208ENST00000509748 CNTNAP4Q9C0A0 1308 aa28.56■■■□□ 2.16
LIN54-208ENST00000509748 TJP1Q07157 1748 aa28.53■■■□□ 2.16
LIN54-208ENST00000509748 CFAP53Q96M91 514 aa28.53■■■□□ 2.16
LIN54-208ENST00000509748 RTCBQ9Y3I0 505 aaKnown RBP28.53■■■□□ 2.16
LIN54-208ENST00000509748 CICQ96RK0 1608 aaPredicted RBP28.53■■■□□ 2.16
LIN54-208ENST00000509748 RPS6KA4O75676 772 aa28.52■■■□□ 2.16
LIN54-208ENST00000509748 TRAPPC3LQ5T215 181 aa28.51■■■□□ 2.15
LIN54-208ENST00000509748 RSPH6AQ9H0K4 717 aa28.51■■■□□ 2.15
LIN54-208ENST00000509748 GOLGB1Q14789 3259 aaKnown RBP28.5■■■□□ 2.15
LIN54-208ENST00000509748 SLC39A6Q13433 755 aa28.5■■■□□ 2.15
LIN54-208ENST00000509748 ARHGEF1Q92888 912 aaKnown RBP28.5■■■□□ 2.15
LIN54-208ENST00000509748 PHACTR3Q96KR7 559 aa28.5■■■□□ 2.15
LIN54-208ENST00000509748 CD2APQ9Y5K6 639 aa28.5■■■□□ 2.15
LIN54-208ENST00000509748 ADRA2BP18089 450 aa28.49■■■□□ 2.15
LIN54-208ENST00000509748 CRKLP46109 303 aaKnown RBP28.49■■■□□ 2.15
LIN54-208ENST00000509748 IL17REQ8NFR9 667 aa28.49■■■□□ 2.15
LIN54-208ENST00000509748 GPR162Q16538 588 aa28.48■■■□□ 2.15
LIN54-208ENST00000509748 GAS2L2Q8NHY3 880 aa28.48■■■□□ 2.15
LIN54-208ENST00000509748 PRKAR2BP31323 418 aa28.47■■■□□ 2.15
LIN54-208ENST00000509748 KCPQ6ZWJ8 1503 aa28.47■■■□□ 2.15
LIN54-208ENST00000509748 CHD4Q14839 1912 aa28.47■■■□□ 2.15
LIN54-208ENST00000509748 GNAT3A8MTJ3 354 aa28.46■■■□□ 2.15
LIN54-208ENST00000509748 INTS5Q6P9B9 1019 aaKnown RBP28.46■■■□□ 2.15
LIN54-208ENST00000509748 DNAJC10Q8IXB1 793 aa28.46■■■□□ 2.15
LIN54-208ENST00000509748 NUDCQ9Y266 331 aa28.46■■■□□ 2.15
LIN54-208ENST00000509748 C4AP0C0L4 1744 aa28.43■■■□□ 2.14
LIN54-208ENST00000509748 GYS1P13807 737 aa28.43■■■□□ 2.14
LIN54-208ENST00000509748 YBX3P16989 372 aaKnown RBP eCLIP28.43■■■□□ 2.147e-8■□□□□ 10.3
LIN54-208ENST00000509748 MMP10P09238 476 aa28.42■■■□□ 2.14
LIN54-208ENST00000509748 U2AF1L5P0DN76 240 aaPredicted RBP28.42■■■□□ 2.14
LIN54-208ENST00000509748 U2AF1Q01081 240 aaKnown RBP eCLIP28.42■■■□□ 2.14
LIN54-208ENST00000509748 NLGN1Q8N2Q7 840 aa28.42■■■□□ 2.14
LIN54-208ENST00000509748 SIPA1L3O60292 1781 aaPredicted RBP28.42■■■□□ 2.14
LIN54-208ENST00000509748 UBR2Q8IWV8 1755 aa28.42■■■□□ 2.14
LIN54-208ENST00000509748 FCHSD2O94868 740 aa28.41■■■□□ 2.14
LIN54-208ENST00000509748 CYP19A1P11511 503 aaPredicted RBP28.41■■■□□ 2.14
LIN54-208ENST00000509748 RFC4P35249 363 aa28.41■■■□□ 2.14
LIN54-208ENST00000509748 PELP1Q8IZL8 1130 aaKnown RBP28.41■■■□□ 2.14
LIN54-208ENST00000509748 CEMIPQ8WUJ3 1361 aa28.4■■■□□ 2.14
LIN54-208ENST00000509748 VSIG10Q8N0Z9 540 aa28.39■■■□□ 2.14
LIN54-208ENST00000509748 CCDC87Q9NVE4 849 aa28.39■■■□□ 2.14
LIN54-208ENST00000509748 SRP68Q9UHB9 627 aaKnown RBP28.38■■■□□ 2.13
LIN54-208ENST00000509748 TEFQ10587 303 aa28.37■■■□□ 2.13
LIN54-208ENST00000509748 SOS1Q07889 1333 aaPredicted RBP28.36■■■□□ 2.13
LIN54-208ENST00000509748 USP42Q9H9J4 1324 aaKnown RBP28.36■■■□□ 2.13
LIN54-208ENST00000509748 ZNF790Q6PG37 636 aa28.35■■■□□ 2.13
LIN54-208ENST00000509748 ZNF496Q96IT1 587 aaPredicted RBP28.35■■■□□ 2.13
LIN54-208ENST00000509748 KIF13BQ9NQT8 1826 aa28.34■■■□□ 2.13
LIN54-208ENST00000509748 GRIN3BO60391 1043 aa28.33■■■□□ 2.13
LIN54-208ENST00000509748 FKBP8Q14318 412 aa28.33■■■□□ 2.13
LIN54-208ENST00000509748 ZNF784Q8NCA9 323 aaPredicted RBP28.33■■■□□ 2.13
LIN54-208ENST00000509748 ZBTB1Q9Y2K1 713 aa28.33■■■□□ 2.13
LIN54-208ENST00000509748 TTC5Q8N0Z6 440 aa28.32■■■□□ 2.12
LIN54-208ENST00000509748 KIAA1551Q9HCM1 1747 aa28.31■■■□□ 2.12
LIN54-208ENST00000509748 HEG1Q9ULI3 1381 aa28.3■■■□□ 2.12
LIN54-208ENST00000509748 KCNQ3O43525 872 aa28.3■■■□□ 2.12
LIN54-208ENST00000509748 C10orf71Q711Q0 1435 aa28.29■■■□□ 2.12
LIN54-208ENST00000509748 DDX10Q13206 875 aaKnown RBP28.29■■■□□ 2.12
LIN54-208ENST00000509748 DDR1Q08345 913 aa28.28■■■□□ 2.12
LIN54-208ENST00000509748 MCM10Q7L590 875 aa28.28■■■□□ 2.12
LIN54-208ENST00000509748 PARP3Q9Y6F1 533 aa28.28■■■□□ 2.12
LIN54-208ENST00000509748 PXDNLA1KZ92 1463 aa28.27■■■□□ 2.12
LIN54-208ENST00000509748 TM4SF1P30408 202 aa28.27■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms