RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 AMER1Q5JTC6 1135 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-227ENST00000508818 MSL1Q68DK7 614 aa13.69□□□□□ -0.22
UBE2D3-227ENST00000508818 SULT6B1Q6IMI4 303 aa13.69□□□□□ -0.22
UBE2D3-227ENST00000508818 DCAF5Q96JK2 942 aa13.69□□□□□ -0.22
UBE2D3-227ENST00000508818 ZNF219Q9P2Y4 722 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-227ENST00000508818 ASAP1Q9ULH1 1129 aa13.69□□□□□ -0.22
UBE2D3-227ENST00000508818 PLEKHG2Q9H7P9 1386 aa13.69□□□□□ -0.22
UBE2D3-227ENST00000508818 QSER1Q2KHR3 1735 aa13.68□□□□□ -0.22
UBE2D3-227ENST00000508818 PHF14O94880 888 aa13.68□□□□□ -0.22
UBE2D3-227ENST00000508818 MTHFSP49914 203 aa13.68□□□□□ -0.22
UBE2D3-227ENST00000508818 CABP4P57796 275 aa13.68□□□□□ -0.22
UBE2D3-227ENST00000508818 CNGB1Q14028 1251 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-227ENST00000508818 CC2D1BQ5T0F9 858 aaKnown RBP13.68□□□□□ -0.22
UBE2D3-227ENST00000508818 MAP3K5Q99683 1374 aa13.68□□□□□ -0.22
UBE2D3-227ENST00000508818 ITGB4P16144 1822 aa13.67□□□□□ -0.22
UBE2D3-227ENST00000508818 AEBP1Q8IUX7 1158 aa13.67□□□□□ -0.22
UBE2D3-227ENST00000508818 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-227ENST00000508818 ATG3Q9NT62 314 aa13.67□□□□□ -0.22
UBE2D3-227ENST00000508818 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-227ENST00000508818 IL13P35225 146 aa13.66□□□□□ -0.22
UBE2D3-227ENST00000508818 C5P01031 1676 aa13.66□□□□□ -0.22
UBE2D3-227ENST00000508818 TOGARAM1Q9Y4F4 1720 aa13.65□□□□□ -0.22
UBE2D3-227ENST00000508818 GNPATO15228 680 aa13.65□□□□□ -0.22
UBE2D3-227ENST00000508818 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
UBE2D3-227ENST00000508818 LINC00116Q8NCU8 138 aa13.65□□□□□ -0.22
UBE2D3-227ENST00000508818 PER1O15534 1290 aaPredicted RBP13.64□□□□□ -0.23
UBE2D3-227ENST00000508818 DIAPH1O60610 1272 aaKnown RBP13.64□□□□□ -0.23
UBE2D3-227ENST00000508818 SSFA2P28290 1259 aa13.64□□□□□ -0.23
UBE2D3-227ENST00000508818 TUBGCP6Q96RT7 1819 aa13.64□□□□□ -0.23
UBE2D3-227ENST00000508818 ITPK1Q13572 414 aa13.63□□□□□ -0.23
UBE2D3-227ENST00000508818 NFATC2IPQ8NCF5 419 aa13.63□□□□□ -0.23
UBE2D3-227ENST00000508818 C4BP0C0L5 1744 aa13.62□□□□□ -0.23
UBE2D3-227ENST00000508818 HMOX1P09601 288 aa13.62□□□□□ -0.23
UBE2D3-227ENST00000508818 TRAPPC3LQ5T215 181 aa13.62□□□□□ -0.23
UBE2D3-227ENST00000508818 SMIM5Q71RC9 77 aa13.62□□□□□ -0.23
UBE2D3-227ENST00000508818 NLGN2Q8NFZ4 835 aa13.62□□□□□ -0.23
UBE2D3-227ENST00000508818 RTCBQ9Y3I0 505 aaKnown RBP13.62□□□□□ -0.23
UBE2D3-227ENST00000508818 CD2APQ9Y5K6 639 aa13.62□□□□□ -0.23
UBE2D3-227ENST00000508818 TAF1LQ8IZX4 1826 aa13.62□□□□□ -0.23
UBE2D3-227ENST00000508818 GRIN3BO60391 1043 aa13.61□□□□□ -0.23
UBE2D3-227ENST00000508818 PTCD1O75127 700 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-227ENST00000508818 AKAP4Q5JQC9 854 aa13.61□□□□□ -0.23
UBE2D3-227ENST00000508818 KDRP35968 1356 aa13.6□□□□□ -0.23
UBE2D3-227ENST00000508818 U2SURPO15042 1029 aaKnown RBP13.6□□□□□ -0.23
UBE2D3-227ENST00000508818 AMIGO3Q86WK7 504 aa13.6□□□□□ -0.23
UBE2D3-227ENST00000508818 RFC4P35249 363 aa13.59□□□□□ -0.23
UBE2D3-227ENST00000508818 RC3H1Q5TC82 1133 aaKnown RBP13.59□□□□□ -0.23
UBE2D3-227ENST00000508818 COL24A1Q17RW2 1714 aa13.59□□□□□ -0.23
UBE2D3-227ENST00000508818 KDM6AO15550 1401 aaPredicted RBP13.58□□□□□ -0.24
UBE2D3-227ENST00000508818 NLGN1Q8N2Q7 840 aa13.58□□□□□ -0.24
UBE2D3-227ENST00000508818 ZNF784Q8NCA9 323 aaPredicted RBP13.58□□□□□ -0.24
UBE2D3-227ENST00000508818 CFAP53Q96M91 514 aa13.58□□□□□ -0.24
UBE2D3-227ENST00000508818 RPS6KA4O75676 772 aa13.57□□□□□ -0.24
UBE2D3-227ENST00000508818 SLC4A9Q96Q91 983 aa13.57□□□□□ -0.24
UBE2D3-227ENST00000508818 NPC1L1Q9UHC9 1359 aa13.57□□□□□ -0.24
UBE2D3-227ENST00000508818 MMP10P09238 476 aa13.56□□□□□ -0.24
UBE2D3-227ENST00000508818 MTHFSDQ2M296 383 aaKnown RBP13.56□□□□□ -0.24
UBE2D3-227ENST00000508818 ARHGEF1Q92888 912 aaKnown RBP13.56□□□□□ -0.24
UBE2D3-227ENST00000508818 SLC52A2Q9HAB3 445 aa13.56□□□□□ -0.24
UBE2D3-227ENST00000508818 LGR6Q9HBX8 967 aa13.56□□□□□ -0.24
UBE2D3-227ENST00000508818 UBR3Q6ZT12 1888 aa13.56□□□□□ -0.24
UBE2D3-227ENST00000508818 CNTNAP4Q9C0A0 1308 aa13.56□□□□□ -0.24
UBE2D3-227ENST00000508818 CHD4Q14839 1912 aa13.55□□□□□ -0.24
UBE2D3-227ENST00000508818 RNMTO43148 476 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-227ENST00000508818 YBX3P16989 372 aaKnown RBP eCLIP13.55□□□□□ -0.24
UBE2D3-227ENST00000508818 FOXD4L1Q9NU39 408 aa13.55□□□□□ -0.24
UBE2D3-227ENST00000508818 CRKLP46109 303 aaKnown RBP13.54□□□□□ -0.24
UBE2D3-227ENST00000508818 NUDCQ9Y266 331 aa13.54□□□□□ -0.24
UBE2D3-227ENST00000508818 GAS2L2Q8NHY3 880 aa13.53□□□□□ -0.24
UBE2D3-227ENST00000508818 PARP3Q9Y6F1 533 aa13.53□□□□□ -0.24
UBE2D3-227ENST00000508818 TEFQ10587 303 aa13.52□□□□□ -0.25
UBE2D3-227ENST00000508818 SLC39A6Q13433 755 aa13.52□□□□□ -0.25
UBE2D3-227ENST00000508818 TTC5Q8N0Z6 440 aa13.52□□□□□ -0.25
UBE2D3-227ENST00000508818 CCDC87Q9NVE4 849 aa13.52□□□□□ -0.25
UBE2D3-227ENST00000508818 WWC3Q9ULE0 1092 aa13.52□□□□□ -0.25
UBE2D3-227ENST00000508818 GNAT3A8MTJ3 354 aa13.51□□□□□ -0.25
UBE2D3-227ENST00000508818 ZPR1O75312 459 aa13.51□□□□□ -0.25
UBE2D3-227ENST00000508818 GYS1P13807 737 aa13.51□□□□□ -0.25
UBE2D3-227ENST00000508818 DNAJC10Q8IXB1 793 aa13.51□□□□□ -0.25
UBE2D3-227ENST00000508818 ZNF831Q5JPB2 1677 aa13.5□□□□□ -0.25
UBE2D3-227ENST00000508818 SCN11AQ9UI33 1791 aa13.5□□□□□ -0.25
UBE2D3-227ENST00000508818 U2AF1L5P0DN76 240 aaPredicted RBP13.49□□□□□ -0.25
UBE2D3-227ENST00000508818 TGFB2P61812 414 aa13.49□□□□□ -0.25
UBE2D3-227ENST00000508818 U2AF1Q01081 240 aaKnown RBP eCLIP13.49□□□□□ -0.252e-12■□□□□ 11.1
UBE2D3-227ENST00000508818 INTS5Q6P9B9 1019 aaKnown RBP13.49□□□□□ -0.25
UBE2D3-227ENST00000508818 SRP68Q9UHB9 627 aaKnown RBP13.49□□□□□ -0.25
UBE2D3-227ENST00000508818 STARD3NLO95772 234 aa13.48□□□□□ -0.25
UBE2D3-227ENST00000508818 PPP2R1AP30153 589 aa13.48□□□□□ -0.25
UBE2D3-227ENST00000508818 PRKAR2BP31323 418 aa13.48□□□□□ -0.25
UBE2D3-227ENST00000508818 VSIG10Q8N0Z9 540 aa13.48□□□□□ -0.25
UBE2D3-227ENST00000508818 USP42Q9H9J4 1324 aaKnown RBP13.47□□□□□ -0.25
UBE2D3-227ENST00000508818 A0A0G2JLW4 131 aa13.47□□□□□ -0.25
UBE2D3-227ENST00000508818 GIGYF1O75420 1035 aaPredicted RBP13.47□□□□□ -0.25
UBE2D3-227ENST00000508818 CYP19A1P11511 503 aaPredicted RBP13.47□□□□□ -0.25
UBE2D3-227ENST00000508818 FKBP8Q14318 412 aa13.47□□□□□ -0.25
UBE2D3-227ENST00000508818 RTF1Q92541 710 aaKnown RBP13.47□□□□□ -0.25
UBE2D3-227ENST00000508818 COL5A3P25940 1745 aaPredicted RBP13.47□□□□□ -0.25
UBE2D3-227ENST00000508818 NEFMP07197 916 aa13.46□□□□□ -0.25
UBE2D3-227ENST00000508818 CANXP27824 592 aaKnown RBP13.46□□□□□ -0.25
UBE2D3-227ENST00000508818 USPL1Q5W0Q7 1092 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms