RNA–Protein interactions for RNA: ENST00000508682.5

RACK1-219, Transcript of receptor for activated C kinase 1, humanhuman

TSL 5

Gene RACK1, Length 1,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-219ENST00000508682 PLEKHO1Q53GL0 409 aaPredicted RBP13.23□□□□□ -0.29
RACK1-219ENST00000508682 MSL1Q68DK7 614 aa13.23□□□□□ -0.29
RACK1-219ENST00000508682 TMOD3Q9NYL9 352 aa13.23□□□□□ -0.29
RACK1-219ENST00000508682 TFCP2L1Q9NZI6 479 aa13.23□□□□□ -0.29
RACK1-219ENST00000508682 LOC102724428A0A0B4J2F2 783 aa13.21□□□□□ -0.29
RACK1-219ENST00000508682 U2SURPO15042 1029 aaKnown RBP13.21□□□□□ -0.29
RACK1-219ENST00000508682 SIK1P57059 783 aa13.21□□□□□ -0.29
RACK1-219ENST00000508682 PHACTR3Q96KR7 559 aa13.21□□□□□ -0.29
RACK1-219ENST00000508682 GOLGB1Q14789 3259 aaKnown RBP13.21□□□□□ -0.29
RACK1-219ENST00000508682 PHF14O94880 888 aa13.2□□□□□ -0.3
RACK1-219ENST00000508682 NFATC2IPQ8NCF5 419 aa13.2□□□□□ -0.3
RACK1-219ENST00000508682 DCAF5Q96JK2 942 aa13.2□□□□□ -0.3
RACK1-219ENST00000508682 MTFR1LQ9H019 292 aa13.2□□□□□ -0.3
RACK1-219ENST00000508682 C5P01031 1676 aa13.2□□□□□ -0.3
RACK1-219ENST00000508682 TAF1LQ8IZX4 1826 aa13.19□□□□□ -0.3
RACK1-219ENST00000508682 C4BP0C0L5 1744 aa13.19□□□□□ -0.3
RACK1-219ENST00000508682 MSH5O43196 834 aa13.18□□□□□ -0.3
RACK1-219ENST00000508682 PTCD1O75127 700 aaKnown RBP13.18□□□□□ -0.3
RACK1-219ENST00000508682 CABP4P57796 275 aa13.18□□□□□ -0.3
RACK1-219ENST00000508682 DDX10Q13206 875 aaKnown RBP13.18□□□□□ -0.3
RACK1-219ENST00000508682 SLC39A6Q13433 755 aa13.18□□□□□ -0.3
RACK1-219ENST00000508682 AMOTQ4VCS5 1084 aa13.18□□□□□ -0.3
RACK1-219ENST00000508682 RBM42Q9BTD8 480 aaKnown RBP13.18□□□□□ -0.3
RACK1-219ENST00000508682 ERVV-2B6SEH9 535 aa13.17□□□□□ -0.3
RACK1-219ENST00000508682 RNMTO43148 476 aaKnown RBP13.17□□□□□ -0.3
RACK1-219ENST00000508682 ATP6V1AP38606 617 aa13.17□□□□□ -0.3
RACK1-219ENST00000508682 GPR162Q16538 588 aa13.17□□□□□ -0.3
RACK1-219ENST00000508682 DNAJC5GQ8N7S2 189 aa13.17□□□□□ -0.3
RACK1-219ENST00000508682 SMARCC1Q92922 1105 aaPredicted RBP13.17□□□□□ -0.3
RACK1-219ENST00000508682 PRKAR2BP31323 418 aa13.16□□□□□ -0.3
RACK1-219ENST00000508682 C1orf141Q5JVX7 400 aa13.16□□□□□ -0.3
RACK1-219ENST00000508682 NLGN2Q8NFZ4 835 aa13.16□□□□□ -0.3
RACK1-219ENST00000508682 ARXQ96QS3 562 aa13.16□□□□□ -0.3
RACK1-219ENST00000508682 RSPH6AQ9H0K4 717 aa13.16□□□□□ -0.3
RACK1-219ENST00000508682 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.15□□□□□ -0.3
RACK1-219ENST00000508682 AKAP4Q5JQC9 854 aa13.15□□□□□ -0.3
RACK1-219ENST00000508682 KLHL34Q8N239 644 aa13.15□□□□□ -0.3
RACK1-219ENST00000508682 IL17REQ8NFR9 667 aa13.15□□□□□ -0.3
RACK1-219ENST00000508682 QSER1Q2KHR3 1735 aa13.15□□□□□ -0.3
RACK1-219ENST00000508682 GNPATO15228 680 aa13.14□□□□□ -0.31
RACK1-219ENST00000508682 AK7Q96M32 723 aa13.14□□□□□ -0.31
RACK1-219ENST00000508682 SLC52A2Q9HAB3 445 aa13.14□□□□□ -0.31
RACK1-219ENST00000508682 UBR3Q6ZT12 1888 aa13.14□□□□□ -0.31
RACK1-219ENST00000508682 SCN11AQ9UI33 1791 aa13.13□□□□□ -0.31
RACK1-219ENST00000508682 KCNQ3O43525 872 aa13.13□□□□□ -0.31
RACK1-219ENST00000508682 HSP90AB1P08238 724 aaKnown RBP13.13□□□□□ -0.31
RACK1-219ENST00000508682 DCTN1Q14203 1278 aa13.13□□□□□ -0.31
RACK1-219ENST00000508682 COL24A1Q17RW2 1714 aa13.13□□□□□ -0.31
RACK1-219ENST00000508682 PLEKHG2Q9H7P9 1386 aa13.12□□□□□ -0.31
RACK1-219ENST00000508682 U2AF1L5P0DN76 240 aaPredicted RBP13.12□□□□□ -0.31
RACK1-219ENST00000508682 U2AF1Q01081 240 aaKnown RBP eCLIP13.12□□□□□ -0.31
RACK1-219ENST00000508682 DNAJC10Q8IXB1 793 aa13.12□□□□□ -0.31
RACK1-219ENST00000508682 WWC3Q9ULE0 1092 aa13.12□□□□□ -0.31
RACK1-219ENST00000508682 MRC1P22897 1456 aa13.11□□□□□ -0.31
RACK1-219ENST00000508682 TJP1Q07157 1748 aa13.11□□□□□ -0.31
RACK1-219ENST00000508682 MYH14Q7Z406 1995 aaKnown RBP13.11□□□□□ -0.31
RACK1-219ENST00000508682 SRP68Q9UHB9 627 aaKnown RBP13.11□□□□□ -0.31
RACK1-219ENST00000508682 KCPQ6ZWJ8 1503 aa13.11□□□□□ -0.31
RACK1-219ENST00000508682 ATP10DQ9P241 1426 aa13.11□□□□□ -0.31
RACK1-219ENST00000508682 ADAMTS7Q9UKP4 1686 aa13.11□□□□□ -0.31
RACK1-219ENST00000508682 CRKLP46109 303 aaKnown RBP13.1□□□□□ -0.31
RACK1-219ENST00000508682 INTS5Q6P9B9 1019 aaKnown RBP13.1□□□□□ -0.31
RACK1-219ENST00000508682 MCM10Q7L590 875 aa13.1□□□□□ -0.31
RACK1-219ENST00000508682 SLC16A10Q8TF71 515 aa13.1□□□□□ -0.31
RACK1-219ENST00000508682 ARHGEF1Q92888 912 aaKnown RBP13.1□□□□□ -0.31
RACK1-219ENST00000508682 MAP3K5Q99683 1374 aa13.09□□□□□ -0.31
RACK1-219ENST00000508682 PRAMEF22A3QJZ6 481 aa13.09□□□□□ -0.31
RACK1-219ENST00000508682 COL5A3P25940 1745 aaPredicted RBP13.09□□□□□ -0.31
RACK1-219ENST00000508682 APLP1P51693 650 aa13.09□□□□□ -0.31
RACK1-219ENST00000508682 PELP1Q8IZL8 1130 aaKnown RBP13.09□□□□□ -0.31
RACK1-219ENST00000508682 GPBP1L1Q9HC44 474 aaPredicted RBP13.09□□□□□ -0.31
RACK1-219ENST00000508682 VIRMAQ69YN4 1812 aaKnown RBP13.09□□□□□ -0.31
RACK1-219ENST00000508682 CFAP53Q96M91 514 aa13.08□□□□□ -0.32
RACK1-219ENST00000508682 THUMPD2Q9BTF0 503 aaKnown RBP13.08□□□□□ -0.32
RACK1-219ENST00000508682 GNAT3A8MTJ3 354 aa13.07□□□□□ -0.32
RACK1-219ENST00000508682 SSFA2P28290 1259 aa13.07□□□□□ -0.32
RACK1-219ENST00000508682 PLEKHF1Q96S99 279 aa13.07□□□□□ -0.32
RACK1-219ENST00000508682 MIS18AQ9NYP9 233 aa13.07□□□□□ -0.32
RACK1-219ENST00000508682 CNTNAP4Q9C0A0 1308 aa13.07□□□□□ -0.32
RACK1-219ENST00000508682 RPS6KA4O75676 772 aa13.06□□□□□ -0.32
RACK1-219ENST00000508682 CYP19A1P11511 503 aaPredicted RBP13.06□□□□□ -0.32
RACK1-219ENST00000508682 YBX3P16989 372 aaKnown RBP eCLIP13.06□□□□□ -0.323e-25■□□□□ 11.3
RACK1-219ENST00000508682 POLD1P28340 1107 aa13.06□□□□□ -0.32
RACK1-219ENST00000508682 PIP4K2AP48426 406 aaPredicted RBP13.06□□□□□ -0.32
RACK1-219ENST00000508682 ZNF496Q96IT1 587 aaPredicted RBP13.06□□□□□ -0.32
RACK1-219ENST00000508682 CEMIPQ8WUJ3 1361 aa13.06□□□□□ -0.32
RACK1-219ENST00000508682 MMP10P09238 476 aa13.05□□□□□ -0.32
RACK1-219ENST00000508682 GYS1P13807 737 aa13.05□□□□□ -0.32
RACK1-219ENST00000508682 GAS2L2Q8NHY3 880 aa13.05□□□□□ -0.32
RACK1-219ENST00000508682 ZNF526Q8TF50 670 aaPredicted RBP13.05□□□□□ -0.32
RACK1-219ENST00000508682 ZBTB1Q9Y2K1 713 aa13.05□□□□□ -0.32
RACK1-219ENST00000508682 RTCBQ9Y3I0 505 aaKnown RBP13.05□□□□□ -0.32
RACK1-219ENST00000508682 FCHSD2O94868 740 aa13.04□□□□□ -0.32
RACK1-219ENST00000508682 FKBP8Q14318 412 aa13.04□□□□□ -0.32
RACK1-219ENST00000508682 CCDC184Q52MB2 194 aa13.04□□□□□ -0.32
RACK1-219ENST00000508682 TRAPPC3LQ5T215 181 aa13.04□□□□□ -0.32
RACK1-219ENST00000508682 RC3H1Q5TC82 1133 aaKnown RBP13.04□□□□□ -0.32
RACK1-219ENST00000508682 NUDCQ9Y266 331 aa13.04□□□□□ -0.32
RACK1-219ENST00000508682 ZNF831Q5JPB2 1677 aa13.04□□□□□ -0.32
RACK1-219ENST00000508682 SIPA1L3O60292 1781 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms