RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 NFATC2IPQ8NCF5 419 aa27.19■■□□□ 1.94
HOXC9-203ENST00000508190 CDCA7LQ96GN5 454 aa27.19■■□□□ 1.94
HOXC9-203ENST00000508190 LAS1LQ9Y4W2 734 aaKnown RBP27.19■■□□□ 1.94
HOXC9-203ENST00000508190 GOLGA2Q08379 1002 aa27.18■■□□□ 1.94
HOXC9-203ENST00000508190 PRIM1P49642 420 aaKnown RBP27.17■■□□□ 1.94
HOXC9-203ENST00000508190 CALD1Q05682 793 aaKnown RBP27.17■■□□□ 1.94
HOXC9-203ENST00000508190 SYTL4Q96C24 671 aaPredicted RBP27.17■■□□□ 1.94
HOXC9-203ENST00000508190 MIS18AQ9NYP9 233 aa27.16■■□□□ 1.94
HOXC9-203ENST00000508190 IL16Q14005 1332 aa27.16■■□□□ 1.94
HOXC9-203ENST00000508190 KCNQ2O43526 872 aa27.16■■□□□ 1.94
HOXC9-203ENST00000508190 TAF7Q15545 349 aaPredicted RBP27.16■■□□□ 1.94
HOXC9-203ENST00000508190 TMOD3Q9NYL9 352 aa27.16■■□□□ 1.94
HOXC9-203ENST00000508190 UBR2Q8IWV8 1755 aa27.15■■□□□ 1.94
HOXC9-203ENST00000508190 FAM196AQ6ZSG2 479 aa27.15■■□□□ 1.94
HOXC9-203ENST00000508190 IFT57Q9NWB7 429 aa27.15■■□□□ 1.94
HOXC9-203ENST00000508190 ZNF853P0CG23 659 aa27.14■■□□□ 1.94
HOXC9-203ENST00000508190 PTF1AQ7RTS3 328 aa27.14■■□□□ 1.94
HOXC9-203ENST00000508190 CFAP44Q96MT7 982 aa27.14■■□□□ 1.94
HOXC9-203ENST00000508190 GNAI1P63096 354 aa27.13■■□□□ 1.93
HOXC9-203ENST00000508190 PIGBQ92521 554 aa27.13■■□□□ 1.93
HOXC9-203ENST00000508190 TSR2Q969E8 191 aaKnown RBP27.13■■□□□ 1.93
HOXC9-203ENST00000508190 BTBD11A6QL63 1104 aa27.12■■□□□ 1.93
HOXC9-203ENST00000508190 SLFN5Q08AF3 891 aa27.12■■□□□ 1.93
HOXC9-203ENST00000508190 CHL1O00533 1208 aa27.11■■□□□ 1.93
HOXC9-203ENST00000508190 SLC39A6Q13433 755 aa27.11■■□□□ 1.93
HOXC9-203ENST00000508190 MBIPQ9NS73 344 aa27.11■■□□□ 1.93
HOXC9-203ENST00000508190 TSPYL4Q9UJ04 414 aa27.11■■□□□ 1.93
HOXC9-203ENST00000508190 TNS1Q9HBL0 1735 aaKnown RBP27.1■■□□□ 1.93
HOXC9-203ENST00000508190 E9PSI1 815 aa27.1■■□□□ 1.93
HOXC9-203ENST00000508190 KCNQ3O43525 872 aa27.1■■□□□ 1.93
HOXC9-203ENST00000508190 FANCIQ9NVI1 1328 aa27.1■■□□□ 1.93
HOXC9-203ENST00000508190 TRIM37O94972 964 aa27.07■■□□□ 1.92
HOXC9-203ENST00000508190 MYH16Q9H6N6 1097 aa27.07■■□□□ 1.92
HOXC9-203ENST00000508190 TRMT2AQ8IZ69 625 aaKnown RBP27.06■■□□□ 1.92
HOXC9-203ENST00000508190 BABAM1Q9NWV8 329 aa27.06■■□□□ 1.92
HOXC9-203ENST00000508190 ASAP1Q9ULH1 1129 aa27.06■■□□□ 1.92
HOXC9-203ENST00000508190 C5P01031 1676 aa27.06■■□□□ 1.92
HOXC9-203ENST00000508190 KCPQ6ZWJ8 1503 aa27.06■■□□□ 1.92
HOXC9-203ENST00000508190 DUSP27Q5VZP5 1158 aa27.06■■□□□ 1.92
HOXC9-203ENST00000508190 ZNF790Q6PG37 636 aa27.05■■□□□ 1.92
HOXC9-203ENST00000508190 ATG3Q9NT62 314 aa27.05■■□□□ 1.92
HOXC9-203ENST00000508190 LY75O60449 1722 aa27.04■■□□□ 1.92
HOXC9-203ENST00000508190 BCL11BQ9C0K0 894 aaPredicted RBP27.03■■□□□ 1.92
HOXC9-203ENST00000508190 KRT24Q2M2I5 525 aa27.02■■□□□ 1.92
HOXC9-203ENST00000508190 TTC5Q8N0Z6 440 aa27.01■■□□□ 1.91
HOXC9-203ENST00000508190 EIF4A1P60842 406 aaKnown RBP27■■□□□ 1.91
HOXC9-203ENST00000508190 EXOSC9Q06265 439 aaKnown RBP27■■□□□ 1.91
HOXC9-203ENST00000508190 LAMB4A4D0S4 1761 aa26.99■■□□□ 1.91
HOXC9-203ENST00000508190 TJP1Q07157 1748 aa26.99■■□□□ 1.91
HOXC9-203ENST00000508190 ZNF496Q96IT1 587 aaPredicted RBP26.99■■□□□ 1.91
HOXC9-203ENST00000508190 PALLDQ8WX93 1383 aa26.99■■□□□ 1.91
HOXC9-203ENST00000508190 PTCD1O75127 700 aaKnown RBP26.98■■□□□ 1.91
HOXC9-203ENST00000508190 C8orf58Q8NAV2 365 aa26.97■■□□□ 1.91
HOXC9-203ENST00000508190 TSPYL6Q8N831 410 aa26.96■■□□□ 1.91
HOXC9-203ENST00000508190 TAF1LQ8IZX4 1826 aa26.96■■□□□ 1.91
HOXC9-203ENST00000508190 HEG1Q9ULI3 1381 aa26.96■■□□□ 1.91
HOXC9-203ENST00000508190 ELL2O00472 640 aaPredicted RBP26.95■■□□□ 1.91
HOXC9-203ENST00000508190 RBM42Q9BTD8 480 aaKnown RBP26.95■■□□□ 1.91
HOXC9-203ENST00000508190 ZNF831Q5JPB2 1677 aa26.95■■□□□ 1.91
HOXC9-203ENST00000508190 FMNL2Q96PY5 1086 aa26.95■■□□□ 1.9
HOXC9-203ENST00000508190 CICQ96RK0 1608 aaPredicted RBP26.94■■□□□ 1.9
HOXC9-203ENST00000508190 PRAMEF22A3QJZ6 481 aa26.94■■□□□ 1.9
HOXC9-203ENST00000508190 SMARCC1Q92922 1105 aaPredicted RBP26.94■■□□□ 1.9
HOXC9-203ENST00000508190 RGPD3A6NKT7 1758 aaPredicted RBP26.93■■□□□ 1.9
HOXC9-203ENST00000508190 RGPD4Q7Z3J3 1758 aa26.93■■□□□ 1.9
HOXC9-203ENST00000508190 COL5A3P25940 1745 aaPredicted RBP26.93■■□□□ 1.9
HOXC9-203ENST00000508190 SLC4A9Q96Q91 983 aa26.93■■□□□ 1.9
HOXC9-203ENST00000508190 ILDR2Q71H61 639 aa26.91■■□□□ 1.9
HOXC9-203ENST00000508190 GIGYF1O75420 1035 aaPredicted RBP26.9■■□□□ 1.9
HOXC9-203ENST00000508190 APBA3O96018 575 aa26.9■■□□□ 1.9
HOXC9-203ENST00000508190 TWISTNBQ3B726 338 aaPredicted RBP26.9■■□□□ 1.9
HOXC9-203ENST00000508190 LOC102724428A0A0B4J2F2 783 aa26.9■■□□□ 1.9
HOXC9-203ENST00000508190 SIK1P57059 783 aa26.9■■□□□ 1.9
HOXC9-203ENST00000508190 SNRPA1P09661 255 aaKnown RBP26.88■■□□□ 1.89
HOXC9-203ENST00000508190 KCNQ4P56696 695 aa26.88■■□□□ 1.89
HOXC9-203ENST00000508190 CACNA1FO60840 1977 aa26.87■■□□□ 1.89
HOXC9-203ENST00000508190 VAMP4O75379 141 aa26.87■■□□□ 1.89
HOXC9-203ENST00000508190 MYH14Q7Z406 1995 aaKnown RBP26.87■■□□□ 1.89
HOXC9-203ENST00000508190 DNAJC10Q8IXB1 793 aa26.86■■□□□ 1.89
HOXC9-203ENST00000508190 ATP6V1AP38606 617 aa26.85■■□□□ 1.89
HOXC9-203ENST00000508190 VSIG10Q8N0Z9 540 aa26.85■■□□□ 1.89
HOXC9-203ENST00000508190 NECTIN2Q92692 538 aa26.85■■□□□ 1.89
HOXC9-203ENST00000508190 ITPK1Q13572 414 aa26.85■■□□□ 1.89
HOXC9-203ENST00000508190 USP16Q9Y5T5 823 aa26.85■■□□□ 1.89
HOXC9-203ENST00000508190 HOXB7P09629 217 aa26.84■■□□□ 1.89
HOXC9-203ENST00000508190 EIF2S2P20042 333 aaKnown RBP26.84■■□□□ 1.89
HOXC9-203ENST00000508190 CCNL1Q9UK58 526 aaPredicted RBP26.84■■□□□ 1.89
HOXC9-203ENST00000508190 RREB1Q92766 1687 aa26.83■■□□□ 1.89
HOXC9-203ENST00000508190 PLSCR1O15162 318 aa26.83■■□□□ 1.89
HOXC9-203ENST00000508190 TCERG1O14776 1098 aaKnown RBP26.82■■□□□ 1.88
HOXC9-203ENST00000508190 SF3B2Q13435 895 aaKnown RBP26.82■■□□□ 1.88
HOXC9-203ENST00000508190 HDGFL1Q5TGJ6 251 aa26.82■■□□□ 1.88
HOXC9-203ENST00000508190 SOS1Q07889 1333 aaPredicted RBP26.81■■□□□ 1.88
HOXC9-203ENST00000508190 C4BP0C0L5 1744 aa26.81■■□□□ 1.88
HOXC9-203ENST00000508190 CT47B1P0C2W7 299 aaPredicted RBP26.8■■□□□ 1.88
HOXC9-203ENST00000508190 PROM2Q8N271 834 aa26.8■■□□□ 1.88
HOXC9-203ENST00000508190 LRRC4BQ9NT99 713 aa26.8■■□□□ 1.88
HOXC9-203ENST00000508190 EN1Q05925 392 aaPredicted RBP26.8■■□□□ 1.88
HOXC9-203ENST00000508190 TXNRD1Q16881 649 aa26.8■■□□□ 1.88
HOXC9-203ENST00000508190 NUP188Q5SRE5 1749 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms