RNA–Protein interactions for RNA: ENST00000507273.5

RACK1-216, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-216ENST00000507273 ITPK1Q13572 414 aa11.31□□□□□ -0.6
RACK1-216ENST00000507273 SLC4A9Q96Q91 983 aa11.31□□□□□ -0.6
RACK1-216ENST00000507273 UTRNP46939 3433 aa11.31□□□□□ -0.6
RACK1-216ENST00000507273 TJP1Q07157 1748 aa11.31□□□□□ -0.6
RACK1-216ENST00000507273 COL23A1Q86Y22 540 aaPredicted RBP11.3□□□□□ -0.6
RACK1-216ENST00000507273 LINC00116Q8NCU8 138 aa11.3□□□□□ -0.6
RACK1-216ENST00000507273 TFCP2L1Q9NZI6 479 aa11.3□□□□□ -0.6
RACK1-216ENST00000507273 UBR2Q8IWV8 1755 aa11.29□□□□□ -0.6
RACK1-216ENST00000507273 MTHFSDQ2M296 383 aaKnown RBP11.29□□□□□ -0.6
RACK1-216ENST00000507273 SMIM5Q71RC9 77 aa11.29□□□□□ -0.6
RACK1-216ENST00000507273 SLC16A10Q8TF71 515 aa11.29□□□□□ -0.6
RACK1-216ENST00000507273 LGR6Q9HBX8 967 aa11.29□□□□□ -0.6
RACK1-216ENST00000507273 AKAP4Q5JQC9 854 aa11.28□□□□□ -0.6
RACK1-216ENST00000507273 C1orf141Q5JVX7 400 aa11.28□□□□□ -0.6
RACK1-216ENST00000507273 NFATC2IPQ8NCF5 419 aa11.28□□□□□ -0.6
RACK1-216ENST00000507273 PPP1R1BQ9UD71 204 aaPredicted RBP11.28□□□□□ -0.6
RACK1-216ENST00000507273 C4AP0C0L4 1744 aa11.27□□□□□ -0.61
RACK1-216ENST00000507273 ATP6V1AP38606 617 aa11.27□□□□□ -0.61
RACK1-216ENST00000507273 CABP4P57796 275 aa11.27□□□□□ -0.61
RACK1-216ENST00000507273 KCPQ6ZWJ8 1503 aa11.26□□□□□ -0.61
RACK1-216ENST00000507273 U2SURPO15042 1029 aaKnown RBP11.26□□□□□ -0.61
RACK1-216ENST00000507273 RNMTO43148 476 aaKnown RBP11.26□□□□□ -0.61
RACK1-216ENST00000507273 PHACTR3Q96KR7 559 aa11.26□□□□□ -0.61
RACK1-216ENST00000507273 FHDC1Q9C0D6 1143 aaPredicted RBP11.26□□□□□ -0.61
RACK1-216ENST00000507273 RSPH6AQ9H0K4 717 aa11.26□□□□□ -0.61
RACK1-216ENST00000507273 DLG5Q8TDM6 1919 aa11.26□□□□□ -0.61
RACK1-216ENST00000507273 MAP3K5Q99683 1374 aa11.26□□□□□ -0.61
RACK1-216ENST00000507273 ARXQ96QS3 562 aa11.25□□□□□ -0.61
RACK1-216ENST00000507273 SYT17Q9BSW7 474 aa11.25□□□□□ -0.61
RACK1-216ENST00000507273 SLC52A2Q9HAB3 445 aa11.25□□□□□ -0.61
RACK1-216ENST00000507273 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.24□□□□□ -0.61
RACK1-216ENST00000507273 AK7Q96M32 723 aa11.24□□□□□ -0.61
RACK1-216ENST00000507273 SSFA2P28290 1259 aa11.23□□□□□ -0.61
RACK1-216ENST00000507273 PRKAR2BP31323 418 aa11.23□□□□□ -0.61
RACK1-216ENST00000507273 MSL1Q68DK7 614 aa11.23□□□□□ -0.61
RACK1-216ENST00000507273 FLAD1Q8NFF5 587 aa11.23□□□□□ -0.61
RACK1-216ENST00000507273 IL17REQ8NFR9 667 aa11.23□□□□□ -0.61
RACK1-216ENST00000507273 CFAP53Q96M91 514 aa11.23□□□□□ -0.61
RACK1-216ENST00000507273 RBM42Q9BTD8 480 aaKnown RBP11.23□□□□□ -0.61
RACK1-216ENST00000507273 CNTNAP4Q9C0A0 1308 aa11.23□□□□□ -0.61
RACK1-216ENST00000507273 GOLGB1Q14789 3259 aaKnown RBP11.23□□□□□ -0.61
RACK1-216ENST00000507273 GNPATO15228 680 aa11.22□□□□□ -0.61
RACK1-216ENST00000507273 PTCD1O75127 700 aaKnown RBP11.22□□□□□ -0.61
RACK1-216ENST00000507273 PHF14O94880 888 aa11.22□□□□□ -0.61
RACK1-216ENST00000507273 HMGB2P26583 209 aaKnown RBP11.22□□□□□ -0.61
RACK1-216ENST00000507273 DDX10Q13206 875 aaKnown RBP11.22□□□□□ -0.61
RACK1-216ENST00000507273 SLC39A6Q13433 755 aa11.22□□□□□ -0.61
RACK1-216ENST00000507273 RC3H1Q5TC82 1133 aaKnown RBP11.22□□□□□ -0.61
RACK1-216ENST00000507273 CEMIPQ8WUJ3 1361 aa11.22□□□□□ -0.61
RACK1-216ENST00000507273 KIF13BQ9NQT8 1826 aa11.21□□□□□ -0.61
RACK1-216ENST00000507273 MSH5O43196 834 aa11.21□□□□□ -0.61
RACK1-216ENST00000507273 POLD1P28340 1107 aa11.21□□□□□ -0.61
RACK1-216ENST00000507273 GAS2L2Q8NHY3 880 aa11.21□□□□□ -0.61
RACK1-216ENST00000507273 KIAA1551Q9HCM1 1747 aa11.21□□□□□ -0.62
RACK1-216ENST00000507273 CHD4Q14839 1912 aa11.2□□□□□ -0.62
RACK1-216ENST00000507273 GNAT3A8MTJ3 354 aa11.2□□□□□ -0.62
RACK1-216ENST00000507273 FCHSD2O94868 740 aa11.2□□□□□ -0.62
RACK1-216ENST00000507273 U2AF1L5P0DN76 240 aaPredicted RBP11.2□□□□□ -0.62
RACK1-216ENST00000507273 U2AF1Q01081 240 aaKnown RBP eCLIP11.2□□□□□ -0.62
RACK1-216ENST00000507273 NUDCQ9Y266 331 aa11.2□□□□□ -0.62
RACK1-216ENST00000507273 RPS6KA4O75676 772 aa11.19□□□□□ -0.62
RACK1-216ENST00000507273 CRKLP46109 303 aaKnown RBP11.19□□□□□ -0.62
RACK1-216ENST00000507273 INTS5Q6P9B9 1019 aaKnown RBP11.19□□□□□ -0.62
RACK1-216ENST00000507273 DNAJC10Q8IXB1 793 aa11.19□□□□□ -0.62
RACK1-216ENST00000507273 NLGN2Q8NFZ4 835 aa11.19□□□□□ -0.62
RACK1-216ENST00000507273 PLEKHF1Q96S99 279 aa11.19□□□□□ -0.62
RACK1-216ENST00000507273 RALBP1Q15311 655 aa11.18□□□□□ -0.62
RACK1-216ENST00000507273 ARHGEF1Q92888 912 aaKnown RBP11.18□□□□□ -0.62
RACK1-216ENST00000507273 RTCBQ9Y3I0 505 aaKnown RBP11.18□□□□□ -0.62
RACK1-216ENST00000507273 CYP19A1P11511 503 aaPredicted RBP11.17□□□□□ -0.62
RACK1-216ENST00000507273 ADRA2BP18089 450 aa11.17□□□□□ -0.62
RACK1-216ENST00000507273 TRAPPC3LQ5T215 181 aa11.17□□□□□ -0.62
RACK1-216ENST00000507273 KDM3BQ7LBC6 1761 aa11.17□□□□□ -0.62
RACK1-216ENST00000507273 KCNQ3O43525 872 aa11.16□□□□□ -0.62
RACK1-216ENST00000507273 GYS1P13807 737 aa11.16□□□□□ -0.62
RACK1-216ENST00000507273 ZNF790Q6PG37 636 aa11.16□□□□□ -0.62
RACK1-216ENST00000507273 MCM10Q7L590 875 aa11.16□□□□□ -0.62
RACK1-216ENST00000507273 VSIG10Q8N0Z9 540 aa11.16□□□□□ -0.62
RACK1-216ENST00000507273 ZNF496Q96IT1 587 aaPredicted RBP11.16□□□□□ -0.62
RACK1-216ENST00000507273 BRCA1P38398 1863 aaKnown RBP11.16□□□□□ -0.62
RACK1-216ENST00000507273 N4BP2Q86UW6 1770 aaPredicted RBP11.16□□□□□ -0.62
RACK1-216ENST00000507273 HEG1Q9ULI3 1381 aa11.16□□□□□ -0.62
RACK1-216ENST00000507273 SOS1Q07889 1333 aaPredicted RBP11.15□□□□□ -0.62
RACK1-216ENST00000507273 AFDNP55196 1824 aaKnown RBP11.15□□□□□ -0.62
RACK1-216ENST00000507273 TEFQ10587 303 aa11.15□□□□□ -0.62
RACK1-216ENST00000507273 DCTN1Q14203 1278 aa11.15□□□□□ -0.62
RACK1-216ENST00000507273 KLHL34Q8N239 644 aa11.15□□□□□ -0.62
RACK1-216ENST00000507273 SRP68Q9UHB9 627 aaKnown RBP11.15□□□□□ -0.62
RACK1-216ENST00000507273 ZBTB1Q9Y2K1 713 aa11.15□□□□□ -0.62
RACK1-216ENST00000507273 CD2APQ9Y5K6 639 aa11.15□□□□□ -0.62
RACK1-216ENST00000507273 MYBBP1AQ9BQG0 1328 aaKnown RBP11.14□□□□□ -0.63
RACK1-216ENST00000507273 USP42Q9H9J4 1324 aaKnown RBP11.14□□□□□ -0.63
RACK1-216ENST00000507273 MMP10P09238 476 aa11.14□□□□□ -0.63
RACK1-216ENST00000507273 CCDC87Q9NVE4 849 aa11.14□□□□□ -0.63
RACK1-216ENST00000507273 NRXN2Q9P2S2 1712 aa11.14□□□□□ -0.63
RACK1-216ENST00000507273 SCN7AQ01118 1682 aa11.14□□□□□ -0.63
RACK1-216ENST00000507273 LAMB4A4D0S4 1761 aa11.13□□□□□ -0.63
RACK1-216ENST00000507273 C10orf71Q711Q0 1435 aa11.13□□□□□ -0.63
RACK1-216ENST00000507273 BTBD11A6QL63 1104 aa11.13□□□□□ -0.63
RACK1-216ENST00000507273 HTATSF1O43719 755 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms