RNA–Protein interactions for RNA: ENST00000507051.1

SEC31A-220, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 4

Gene SEC31A, Length 458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-220ENST00000507051 IGSF1Q8N6C5 1336 aa12.91□□□□□ -0.34
SEC31A-220ENST00000507051 TRIM26Q12899 539 aaPredicted RBP12.91□□□□□ -0.34
SEC31A-220ENST00000507051 EIF4A2Q14240 407 aaKnown RBP12.91□□□□□ -0.34
SEC31A-220ENST00000507051 TMOD3Q9NYL9 352 aa12.91□□□□□ -0.34
SEC31A-220ENST00000507051 IFNL2Q8IZJ0 200 aa12.9□□□□□ -0.34
SEC31A-220ENST00000507051 ATG3Q9NT62 314 aa12.9□□□□□ -0.34
SEC31A-220ENST00000507051 PXDNLA1KZ92 1463 aa12.9□□□□□ -0.34
SEC31A-220ENST00000507051 VIRMAQ69YN4 1812 aaKnown RBP12.9□□□□□ -0.34
SEC31A-220ENST00000507051 KDM6AO15550 1401 aaPredicted RBP12.89□□□□□ -0.35
SEC31A-220ENST00000507051 TJP1Q07157 1748 aa12.89□□□□□ -0.35
SEC31A-220ENST00000507051 GNPATO15228 680 aa12.89□□□□□ -0.35
SEC31A-220ENST00000507051 SLC4A9Q96Q91 983 aa12.89□□□□□ -0.35
SEC31A-220ENST00000507051 WWC3Q9ULE0 1092 aa12.89□□□□□ -0.35
SEC31A-220ENST00000507051 ATP6V1AP38606 617 aa12.88□□□□□ -0.35
SEC31A-220ENST00000507051 SCN11AQ9UI33 1791 aa12.88□□□□□ -0.35
SEC31A-220ENST00000507051 ADAMTS7Q9UKP4 1686 aa12.87□□□□□ -0.35
SEC31A-220ENST00000507051 TNNT2P45379 298 aaPredicted RBP12.87□□□□□ -0.35
SEC31A-220ENST00000507051 TIMELESSQ9UNS1 1208 aa12.87□□□□□ -0.35
SEC31A-220ENST00000507051 ARFGEF1Q9Y6D6 1849 aa12.87□□□□□ -0.35
SEC31A-220ENST00000507051 C10orf71Q711Q0 1435 aa12.87□□□□□ -0.35
SEC31A-220ENST00000507051 MMP10P09238 476 aa12.86□□□□□ -0.35
SEC31A-220ENST00000507051 GPBP1L1Q9HC44 474 aaPredicted RBP12.86□□□□□ -0.35
SEC31A-220ENST00000507051 ZNF526Q8TF50 670 aaPredicted RBP12.85□□□□□ -0.35
SEC31A-220ENST00000507051 ERVV-2B6SEH9 535 aa12.84□□□□□ -0.35
SEC31A-220ENST00000507051 CNTNAP4Q9C0A0 1308 aa12.84□□□□□ -0.35
SEC31A-220ENST00000507051 CLSPNQ9HAW4 1339 aa12.84□□□□□ -0.35
SEC31A-220ENST00000507051 DCAF5Q96JK2 942 aa12.83□□□□□ -0.36
SEC31A-220ENST00000507051 POLR3GLQ9BT43 218 aa12.83□□□□□ -0.36
SEC31A-220ENST00000507051 RTCBQ9Y3I0 505 aaKnown RBP12.83□□□□□ -0.36
SEC31A-220ENST00000507051 GYS1P13807 737 aa12.82□□□□□ -0.36
SEC31A-220ENST00000507051 RC3H1Q5TC82 1133 aaKnown RBP12.82□□□□□ -0.36
SEC31A-220ENST00000507051 AEBP1Q8IUX7 1158 aa12.82□□□□□ -0.36
SEC31A-220ENST00000507051 ARHGEF1Q92888 912 aaKnown RBP12.82□□□□□ -0.36
SEC31A-220ENST00000507051 PANK3Q9H999 370 aa12.82□□□□□ -0.36
SEC31A-220ENST00000507051 PCNTO95613 3336 aa12.81□□□□□ -0.36
SEC31A-220ENST00000507051 KIF3CO14782 793 aa12.81□□□□□ -0.36
SEC31A-220ENST00000507051 HSP90AB1P08238 724 aaKnown RBP12.81□□□□□ -0.36
SEC31A-220ENST00000507051 HSPA5P11021 654 aaKnown RBP12.81□□□□□ -0.36
SEC31A-220ENST00000507051 HSPA6P17066 643 aa12.81□□□□□ -0.36
SEC31A-220ENST00000507051 ADRA2BP18089 450 aa12.81□□□□□ -0.36
SEC31A-220ENST00000507051 TRAPPC3LQ5T215 181 aa12.81□□□□□ -0.36
SEC31A-220ENST00000507051 ZNF530Q6P9A1 599 aaPredicted RBP12.81□□□□□ -0.36
SEC31A-220ENST00000507051 RBM42Q9BTD8 480 aaKnown RBP12.81□□□□□ -0.36
SEC31A-220ENST00000507051 SBF1O95248 1867 aa12.8□□□□□ -0.36
SEC31A-220ENST00000507051 RPS6KA4O75676 772 aa12.8□□□□□ -0.36
SEC31A-220ENST00000507051 TGFB2P61812 414 aa12.8□□□□□ -0.36
SEC31A-220ENST00000507051 PLEKHO1Q53GL0 409 aaPredicted RBP12.8□□□□□ -0.36
SEC31A-220ENST00000507051 AFDNP55196 1824 aaKnown RBP12.8□□□□□ -0.36
SEC31A-220ENST00000507051 MRC1P22897 1456 aa12.79□□□□□ -0.36
SEC31A-220ENST00000507051 A0A0G2JLW4 131 aa12.79□□□□□ -0.36
SEC31A-220ENST00000507051 AMOTQ4VCS5 1084 aa12.79□□□□□ -0.36
SEC31A-220ENST00000507051 NLGN1Q8N2Q7 840 aa12.79□□□□□ -0.36
SEC31A-220ENST00000507051 UBR2Q8IWV8 1755 aa12.79□□□□□ -0.36
SEC31A-220ENST00000507051 KCNA3P22001 575 aa12.78□□□□□ -0.36
SEC31A-220ENST00000507051 CABP4P57796 275 aa12.78□□□□□ -0.36
SEC31A-220ENST00000507051 EIF4G2P78344 907 aaKnown RBP eCLIP12.78□□□□□ -0.36
SEC31A-220ENST00000507051 BCS1LQ9Y276 419 aa12.78□□□□□ -0.36
SEC31A-220ENST00000507051 NRXN2Q9P2S2 1712 aa12.78□□□□□ -0.36
SEC31A-220ENST00000507051 DLEC1Q9Y238 1755 aa12.78□□□□□ -0.36
SEC31A-220ENST00000507051 PTCD1O75127 700 aaKnown RBP12.77□□□□□ -0.37
SEC31A-220ENST00000507051 DPEP1P16444 411 aa12.77□□□□□ -0.37
SEC31A-220ENST00000507051 RFC4P35249 363 aa12.77□□□□□ -0.37
SEC31A-220ENST00000507051 CRKLP46109 303 aaKnown RBP12.77□□□□□ -0.37
SEC31A-220ENST00000507051 MTHFSP49914 203 aa12.77□□□□□ -0.37
SEC31A-220ENST00000507051 IFFO2Q5TF58 517 aa12.77□□□□□ -0.37
SEC31A-220ENST00000507051 PIAS4Q8N2W9 510 aaPredicted RBP12.77□□□□□ -0.37
SEC31A-220ENST00000507051 CCDC87Q9NVE4 849 aa12.77□□□□□ -0.37
SEC31A-220ENST00000507051 KCPQ6ZWJ8 1503 aa12.77□□□□□ -0.37
SEC31A-220ENST00000507051 WDR90Q96KV7 1748 aa12.76□□□□□ -0.37
SEC31A-220ENST00000507051 IL13P35225 146 aa12.76□□□□□ -0.37
SEC31A-220ENST00000507051 SULT6B1Q6IMI4 303 aa12.76□□□□□ -0.37
SEC31A-220ENST00000507051 MORC1Q86VD1 984 aa12.76□□□□□ -0.37
SEC31A-220ENST00000507051 NFATC2IPQ8NCF5 419 aa12.76□□□□□ -0.37
SEC31A-220ENST00000507051 SRP68Q9UHB9 627 aaKnown RBP12.76□□□□□ -0.37
SEC31A-220ENST00000507051 USP42Q9H9J4 1324 aaKnown RBP12.76□□□□□ -0.37
SEC31A-220ENST00000507051 DDR1Q08345 913 aa12.75□□□□□ -0.37
SEC31A-220ENST00000507051 FKBP8Q14318 412 aa12.75□□□□□ -0.37
SEC31A-220ENST00000507051 C1orf141Q5JVX7 400 aa12.75□□□□□ -0.37
SEC31A-220ENST00000507051 PCGF6Q9BYE7 350 aa12.75□□□□□ -0.37
SEC31A-220ENST00000507051 PARP3Q9Y6F1 533 aa12.75□□□□□ -0.37
SEC31A-220ENST00000507051 TNRC6CQ9HCJ0 1690 aaKnown RBP12.74□□□□□ -0.37
SEC31A-220ENST00000507051 FCHSD2O94868 740 aa12.74□□□□□ -0.37
SEC31A-220ENST00000507051 INTS5Q6P9B9 1019 aaKnown RBP12.74□□□□□ -0.37
SEC31A-220ENST00000507051 SIPA1L3O60292 1781 aaPredicted RBP12.74□□□□□ -0.37
SEC31A-220ENST00000507051 AMER1Q5JTC6 1135 aaPredicted RBP12.73□□□□□ -0.37
SEC31A-220ENST00000507051 ARHGAP27Q6ZUM4 889 aa12.73□□□□□ -0.37
SEC31A-220ENST00000507051 NMRK2Q9NPI5 230 aa12.73□□□□□ -0.37
SEC31A-220ENST00000507051 CCDC88AQ3V6T2 1871 aa12.73□□□□□ -0.37
SEC31A-220ENST00000507051 POLRMTO00411 1230 aaKnown RBP12.72□□□□□ -0.37
SEC31A-220ENST00000507051 AKAP4Q5JQC9 854 aa12.72□□□□□ -0.37
SEC31A-220ENST00000507051 SLC52A2Q9HAB3 445 aa12.72□□□□□ -0.37
SEC31A-220ENST00000507051 LGR6Q9HBX8 967 aa12.72□□□□□ -0.37
SEC31A-220ENST00000507051 TIAM2Q8IVF5 1701 aa12.71□□□□□ -0.37
SEC31A-220ENST00000507051 SCN7AQ01118 1682 aa12.71□□□□□ -0.37
SEC31A-220ENST00000507051 SOS1Q07889 1333 aaPredicted RBP12.71□□□□□ -0.37
SEC31A-220ENST00000507051 TOMM70O94826 608 aa12.71□□□□□ -0.37
SEC31A-220ENST00000507051 TM4SF1P30408 202 aa12.71□□□□□ -0.37
SEC31A-220ENST00000507051 C9orf131Q5VYM1 1079 aa12.71□□□□□ -0.37
SEC31A-220ENST00000507051 DNAJC10Q8IXB1 793 aa12.71□□□□□ -0.37
SEC31A-220ENST00000507051 KNSTRNQ9Y448 316 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms