RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 PHF24Q9UPV7 400 aa7.9□□□□□ -1.14
RFC1-208ENST00000504849 WASLO00401 505 aaPredicted RBP7.89□□□□□ -1.15
RFC1-208ENST00000504849 NR6A1Q15406 480 aa7.89□□□□□ -1.15
RFC1-208ENST00000504849 RNF135Q8IUD6 432 aa7.89□□□□□ -1.15
RFC1-208ENST00000504849 NDFIP2Q9NV92 336 aa7.89□□□□□ -1.15
RFC1-208ENST00000504849 ARID1BQ8NFD5 2236 aaPredicted RBP7.88□□□□□ -1.15
RFC1-208ENST00000504849 BMP4P12644 408 aa7.88□□□□□ -1.15
RFC1-208ENST00000504849 CTBSQ01459 385 aa7.88□□□□□ -1.15
RFC1-208ENST00000504849 LRP8Q14114 963 aa7.88□□□□□ -1.15
RFC1-208ENST00000504849 TAS1R3Q7RTX0 852 aa7.88□□□□□ -1.15
RFC1-208ENST00000504849 GPAMQ9HCL2 828 aa7.88□□□□□ -1.15
RFC1-208ENST00000504849 PPP2R2DQ66LE6 453 aa7.87□□□□□ -1.15
RFC1-208ENST00000504849 KRTAP4-9Q9BYQ8 210 aa7.87□□□□□ -1.15
RFC1-208ENST00000504849 ATXN7L1Q9ULK2 861 aaPredicted RBP7.87□□□□□ -1.15
RFC1-208ENST00000504849 KDM2AQ9Y2K7 1162 aa7.87□□□□□ -1.15
RFC1-208ENST00000504849 SPATA31C1P0DKV0 1188 aa7.86□□□□□ -1.15
RFC1-208ENST00000504849 CLN3Q13286 438 aa7.86□□□□□ -1.15
RFC1-208ENST00000504849 BARGINQ6ZT62 677 aa7.86□□□□□ -1.15
RFC1-208ENST00000504849 CHSY3Q70JA7 882 aa7.86□□□□□ -1.15
RFC1-208ENST00000504849 ABHD17AQ96GS6 310 aa7.86□□□□□ -1.15
RFC1-208ENST00000504849 TULP1O00294 542 aaPredicted RBP7.85□□□□□ -1.15
RFC1-208ENST00000504849 HYAL3O43820 417 aaPredicted RBP7.85□□□□□ -1.15
RFC1-208ENST00000504849 ARAFP10398 606 aa7.85□□□□□ -1.15
RFC1-208ENST00000504849 FGFR3P22607 806 aa7.85□□□□□ -1.15
RFC1-208ENST00000504849 SEPT12Q8IYM1 358 aa7.85□□□□□ -1.15
RFC1-208ENST00000504849 NEURL1BA8MQ27 555 aa7.84□□□□□ -1.15
RFC1-208ENST00000504849 DZIP3Q86Y13 1208 aaKnown RBP7.84□□□□□ -1.15
RFC1-208ENST00000504849 NLRP3Q96P20 1036 aa7.84□□□□□ -1.15
RFC1-208ENST00000504849 PLVAPQ9BX97 442 aa7.84□□□□□ -1.15
RFC1-208ENST00000504849 KLF15Q9UIH9 416 aa7.84□□□□□ -1.15
RFC1-208ENST00000504849 BNIP3LO60238 219 aa7.83□□□□□ -1.16
RFC1-208ENST00000504849 ERVK-9P63128 1117 aa7.83□□□□□ -1.16
RFC1-208ENST00000504849 LBRQ14739 615 aaKnown RBP7.82□□□□□ -1.16
RFC1-208ENST00000504849 HCN2Q9UL51 889 aa7.82□□□□□ -1.16
RFC1-208ENST00000504849 MCTP1Q6DN14 999 aa7.81□□□□□ -1.16
RFC1-208ENST00000504849 KRTAP4-2Q9BYR5 136 aa7.81□□□□□ -1.16
RFC1-208ENST00000504849 ZMYND10O75800 440 aa7.8□□□□□ -1.16
RFC1-208ENST00000504849 FBXO31Q5XUX0 539 aaPredicted RBP7.8□□□□□ -1.16
RFC1-208ENST00000504849 FCHSD1Q86WN1 690 aa7.8□□□□□ -1.16
RFC1-208ENST00000504849 EPS8L1Q8TE68 723 aa7.8□□□□□ -1.16
RFC1-208ENST00000504849 RUBCNLQ9H714 662 aa7.8□□□□□ -1.16
RFC1-208ENST00000504849 A0A1B0GTH6 734 aa7.79□□□□□ -1.16
RFC1-208ENST00000504849 CLK2P49760 499 aaKnown RBP7.79□□□□□ -1.16
RFC1-208ENST00000504849 COBLO75128 1261 aa7.78□□□□□ -1.16
RFC1-208ENST00000504849 PHKA2P46019 1235 aa7.78□□□□□ -1.16
RFC1-208ENST00000504849 CC2D2BQ6DHV5 1058 aa7.78□□□□□ -1.16
RFC1-208ENST00000504849 ERICH6Q7L0X2 663 aa7.78□□□□□ -1.16
RFC1-208ENST00000504849 ARHGEF10LQ9HCE6 1279 aa7.78□□□□□ -1.16
RFC1-208ENST00000504849 GIGYF1O75420 1035 aaPredicted RBP7.77□□□□□ -1.17
RFC1-208ENST00000504849 SCTRP47872 440 aa7.77□□□□□ -1.17
RFC1-208ENST00000504849 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.77□□□□□ -1.17
RFC1-208ENST00000504849 TRAK2O60296 914 aa7.76□□□□□ -1.17
RFC1-208ENST00000504849 MSX1P28360 303 aa7.76□□□□□ -1.17
RFC1-208ENST00000504849 DNAAF2Q9NVR5 837 aaKnown RBP7.76□□□□□ -1.17
RFC1-208ENST00000504849 TRIM66O15016 1216 aa7.75□□□□□ -1.17
RFC1-208ENST00000504849 CYP2U1Q7Z449 544 aa7.75□□□□□ -1.17
RFC1-208ENST00000504849 OSBPL3Q9H4L5 887 aa7.75□□□□□ -1.17
RFC1-208ENST00000504849 HRH3Q9Y5N1 445 aa7.75□□□□□ -1.17
RFC1-208ENST00000504849 IL2RAP01589 272 aa7.74□□□□□ -1.17
RFC1-208ENST00000504849 TRIM52Q96A61 297 aa7.74□□□□□ -1.17
RFC1-208ENST00000504849 FMNL2Q96PY5 1086 aa7.74□□□□□ -1.17
RFC1-208ENST00000504849 RAB6BQ9NRW1 208 aa7.74□□□□□ -1.17
RFC1-208ENST00000504849 H2AFB1P0C5Y9 115 aa7.73□□□□□ -1.17
RFC1-208ENST00000504849 H2AFB2P0C5Z0 115 aa7.73□□□□□ -1.17
RFC1-208ENST00000504849 ADH6P28332 368 aa7.73□□□□□ -1.17
RFC1-208ENST00000504849 CENPCQ03188 943 aa7.73□□□□□ -1.17
RFC1-208ENST00000504849 C4orf17Q53FE4 359 aa7.73□□□□□ -1.17
RFC1-208ENST00000504849 CRISPLD1Q9H336 500 aa7.73□□□□□ -1.17
RFC1-208ENST00000504849 CSB-PGBD3P0DP91 1061 aa7.72□□□□□ -1.17
RFC1-208ENST00000504849 YBX3P16989 372 aaKnown RBP eCLIP7.72□□□□□ -1.17
RFC1-208ENST00000504849 COL9A3Q14050 684 aaPredicted RBP7.72□□□□□ -1.17
RFC1-208ENST00000504849 EFHC2Q5JST6 749 aa7.72□□□□□ -1.17
RFC1-208ENST00000504849 PGBD3Q8N328 593 aa7.72□□□□□ -1.17
RFC1-208ENST00000504849 ARXQ96QS3 562 aa7.72□□□□□ -1.17
RFC1-208ENST00000504849 ESYT1Q9BSJ8 1104 aa7.72□□□□□ -1.17
RFC1-208ENST00000504849 FHDC1Q9C0D6 1143 aaPredicted RBP7.72□□□□□ -1.17
RFC1-208ENST00000504849 COL17A1Q9UMD9 1497 aaPredicted RBP7.72□□□□□ -1.17
RFC1-208ENST00000504849 FAM229AH3BQW9 127 aa7.71□□□□□ -1.18
RFC1-208ENST00000504849 CNKSR1Q969H4 720 aa7.71□□□□□ -1.18
RFC1-208ENST00000504849 HMX1Q9NP08 348 aaPredicted RBP7.71□□□□□ -1.18
RFC1-208ENST00000504849 APBA3O96018 575 aa7.7□□□□□ -1.18
RFC1-208ENST00000504849 MDFIQ99750 246 aa7.7□□□□□ -1.18
RFC1-208ENST00000504849 AVENQ9NQS1 362 aaPredicted RBP7.7□□□□□ -1.18
RFC1-208ENST00000504849 POLR3EQ9NVU0 708 aa7.7□□□□□ -1.18
RFC1-208ENST00000504849 TIMELESSQ9UNS1 1208 aa7.7□□□□□ -1.18
RFC1-208ENST00000504849 ZCCHC2Q9C0B9 1178 aaKnown RBP7.69□□□□□ -1.18
RFC1-208ENST00000504849 PRRT3Q5FWE3 981 aa7.68□□□□□ -1.18
RFC1-208ENST00000504849 FAM182BQ5T319 152 aa7.68□□□□□ -1.18
RFC1-208ENST00000504849 ZSCAN10Q96SZ4 725 aaPredicted RBP7.68□□□□□ -1.18
RFC1-208ENST00000504849 TXKP42681 527 aa7.67□□□□□ -1.18
RFC1-208ENST00000504849 PCDHGC4Q9Y5F7 938 aa7.67□□□□□ -1.18
RFC1-208ENST00000504849 PAX4O43316 350 aa7.66□□□□□ -1.18
RFC1-208ENST00000504849 CD33P20138 364 aa7.66□□□□□ -1.18
RFC1-208ENST00000504849 CCDC125Q86Z20 511 aa7.66□□□□□ -1.18
RFC1-208ENST00000504849 ZC3H15Q8WU90 426 aaKnown RBP7.66□□□□□ -1.18
RFC1-208ENST00000504849 SPDYE3A6NKU9 549 aa7.65□□□□□ -1.18
RFC1-208ENST00000504849 GNRH1P01148 92 aa7.65□□□□□ -1.18
RFC1-208ENST00000504849 PCBP4P57723 403 aaKnown RBP7.65□□□□□ -1.18
RFC1-208ENST00000504849 TNP2Q05952 138 aa7.65□□□□□ -1.18
RFC1-208ENST00000504849 GRIK4Q16099 956 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms