RNA–Protein interactions for RNA: ENST00000504824.5

SDHA-205, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-205ENST00000504824 GRIN3BO60391 1043 aa23.36■■□□□ 1.33
SDHA-205ENST00000504824 ZNF530Q6P9A1 599 aaPredicted RBP23.36■■□□□ 1.33
SDHA-205ENST00000504824 DIAPH1O60610 1272 aaKnown RBP23.35■■□□□ 1.33
SDHA-205ENST00000504824 ATP6V1AP38606 617 aa23.35■■□□□ 1.33
SDHA-205ENST00000504824 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.34■■□□□ 1.33
SDHA-205ENST00000504824 SSFA2P28290 1259 aa23.34■■□□□ 1.33
SDHA-205ENST00000504824 DCAF5Q96JK2 942 aa23.34■■□□□ 1.33
SDHA-205ENST00000504824 UBR3Q6ZT12 1888 aa23.34■■□□□ 1.33
SDHA-205ENST00000504824 KDRP35968 1356 aa23.34■■□□□ 1.33
SDHA-205ENST00000504824 ERVV-2B6SEH9 535 aa23.33■■□□□ 1.33
SDHA-205ENST00000504824 ASAP1Q9ULH1 1129 aa23.33■■□□□ 1.33
SDHA-205ENST00000504824 CD2APQ9Y5K6 639 aa23.33■■□□□ 1.33
SDHA-205ENST00000504824 GNPATO15228 680 aa23.33■■□□□ 1.32
SDHA-205ENST00000504824 C1orf141Q5JVX7 400 aa23.33■■□□□ 1.32
SDHA-205ENST00000504824 LINC00116Q8NCU8 138 aa23.32■■□□□ 1.32
SDHA-205ENST00000504824 HMOX1P09601 288 aa23.31■■□□□ 1.32
SDHA-205ENST00000504824 ATG3Q9NT62 314 aa23.3■■□□□ 1.32
SDHA-205ENST00000504824 CABP4P57796 275 aa23.28■■□□□ 1.32
SDHA-205ENST00000504824 ITPK1Q13572 414 aa23.28■■□□□ 1.32
SDHA-205ENST00000504824 RBM42Q9BTD8 480 aaKnown RBP23.28■■□□□ 1.32
SDHA-205ENST00000504824 YBX3P16989 372 aaKnown RBP eCLIP23.27■■□□□ 1.321e-9■□□□□ 10.8
SDHA-205ENST00000504824 AMIGO3Q86WK7 504 aa23.26■■□□□ 1.31
SDHA-205ENST00000504824 U2SURPO15042 1029 aaKnown RBP23.25■■□□□ 1.31
SDHA-205ENST00000504824 SMIM5Q71RC9 77 aa23.25■■□□□ 1.31
SDHA-205ENST00000504824 RTCBQ9Y3I0 505 aaKnown RBP23.25■■□□□ 1.31
SDHA-205ENST00000504824 KDM6AO15550 1401 aaPredicted RBP23.25■■□□□ 1.31
SDHA-205ENST00000504824 AKAP4Q5JQC9 854 aa23.25■■□□□ 1.31
SDHA-205ENST00000504824 UTRNP46939 3433 aa23.24■■□□□ 1.31
SDHA-205ENST00000504824 CFAP53Q96M91 514 aa23.24■■□□□ 1.31
SDHA-205ENST00000504824 GIGYF1O75420 1035 aaPredicted RBP23.23■■□□□ 1.31
SDHA-205ENST00000504824 TRAPPC3LQ5T215 181 aa23.23■■□□□ 1.31
SDHA-205ENST00000504824 NFATC2IPQ8NCF5 419 aa23.23■■□□□ 1.31
SDHA-205ENST00000504824 PPP2R1AP30153 589 aa23.22■■□□□ 1.31
SDHA-205ENST00000504824 COL3A1P02461 1466 aaPredicted RBP23.22■■□□□ 1.31
SDHA-205ENST00000504824 ZNF831Q5JPB2 1677 aa23.22■■□□□ 1.31
SDHA-205ENST00000504824 MTHFSDQ2M296 383 aaKnown RBP23.21■■□□□ 1.31
SDHA-205ENST00000504824 ADRA2BP18089 450 aa23.2■■□□□ 1.3
SDHA-205ENST00000504824 C1QTNF8P60827 252 aa23.2■■□□□ 1.3
SDHA-205ENST00000504824 RC3H1Q5TC82 1133 aaKnown RBP23.19■■□□□ 1.3
SDHA-205ENST00000504824 LGR6Q9HBX8 967 aa23.19■■□□□ 1.3
SDHA-205ENST00000504824 CNTNAP4Q9C0A0 1308 aa23.19■■□□□ 1.3
SDHA-205ENST00000504824 MMP10P09238 476 aa23.18■■□□□ 1.3
SDHA-205ENST00000504824 NLGN1Q8N2Q7 840 aa23.18■■□□□ 1.3
SDHA-205ENST00000504824 SENP3-EIF4A1A0A087X0R7 540 aa23.17■■□□□ 1.3
SDHA-205ENST00000504824 RFC4P35249 363 aa23.17■■□□□ 1.3
SDHA-205ENST00000504824 SLC4A9Q96Q91 983 aa23.17■■□□□ 1.3
SDHA-205ENST00000504824 NUDCQ9Y266 331 aa23.17■■□□□ 1.3
SDHA-205ENST00000504824 COL5A3P25940 1745 aaPredicted RBP23.17■■□□□ 1.3
SDHA-205ENST00000504824 RNMTO43148 476 aaKnown RBP23.16■■□□□ 1.3
SDHA-205ENST00000504824 PTCD1O75127 700 aaKnown RBP23.16■■□□□ 1.3
SDHA-205ENST00000504824 RPS6KA4O75676 772 aa23.16■■□□□ 1.3
SDHA-205ENST00000504824 SLC52A2Q9HAB3 445 aa23.16■■□□□ 1.3
SDHA-205ENST00000504824 WWC3Q9ULE0 1092 aa23.16■■□□□ 1.3
SDHA-205ENST00000504824 ARHGEF1Q92888 912 aaKnown RBP23.14■■□□□ 1.29
SDHA-205ENST00000504824 SCN11AQ9UI33 1791 aa23.14■■□□□ 1.29
SDHA-205ENST00000504824 ATP10DQ9P241 1426 aa23.14■■□□□ 1.29
SDHA-205ENST00000504824 GAS2L2Q8NHY3 880 aa23.13■■□□□ 1.29
SDHA-205ENST00000504824 CCDC87Q9NVE4 849 aa23.13■■□□□ 1.29
SDHA-205ENST00000504824 CICQ96RK0 1608 aaPredicted RBP23.12■■□□□ 1.29
SDHA-205ENST00000504824 PARP3Q9Y6F1 533 aa23.12■■□□□ 1.29
SDHA-205ENST00000504824 U2AF1L5P0DN76 240 aaPredicted RBP23.11■■□□□ 1.29
SDHA-205ENST00000504824 U2AF1Q01081 240 aaKnown RBP eCLIP23.11■■□□□ 1.29
SDHA-205ENST00000504824 PRKAR2BP31323 418 aa23.1■■□□□ 1.29
SDHA-205ENST00000504824 CRKLP46109 303 aaKnown RBP23.1■■□□□ 1.29
SDHA-205ENST00000504824 RSPH6AQ9H0K4 717 aa23.1■■□□□ 1.29
SDHA-205ENST00000504824 GPBP1L1Q9HC44 474 aaPredicted RBP23.1■■□□□ 1.29
SDHA-205ENST00000504824 GNAT3A8MTJ3 354 aa23.09■■□□□ 1.29
SDHA-205ENST00000504824 GYS1P13807 737 aa23.09■■□□□ 1.29
SDHA-205ENST00000504824 TGFB2P61812 414 aa23.09■■□□□ 1.29
SDHA-205ENST00000504824 PHACTR3Q96KR7 559 aa23.09■■□□□ 1.29
SDHA-205ENST00000504824 MYH14Q7Z406 1995 aaKnown RBP23.08■■□□□ 1.29
SDHA-205ENST00000504824 C4AP0C0L4 1744 aa23.08■■□□□ 1.29
SDHA-205ENST00000504824 FCHSD2O94868 740 aa23.08■■□□□ 1.28
SDHA-205ENST00000504824 DDX10Q13206 875 aaKnown RBP23.08■■□□□ 1.28
SDHA-205ENST00000504824 SLC39A6Q13433 755 aa23.08■■□□□ 1.28
SDHA-205ENST00000504824 GOLGB1Q14789 3259 aaKnown RBP23.07■■□□□ 1.28
SDHA-205ENST00000504824 KIF13BQ9NQT8 1826 aa23.07■■□□□ 1.28
SDHA-205ENST00000504824 C10orf71Q711Q0 1435 aa23.07■■□□□ 1.28
SDHA-205ENST00000504824 PXDNLA1KZ92 1463 aa23.07■■□□□ 1.28
SDHA-205ENST00000504824 IL17REQ8NFR9 667 aa23.07■■□□□ 1.28
SDHA-205ENST00000504824 TJP1Q07157 1748 aa23.06■■□□□ 1.28
SDHA-205ENST00000504824 BCS1LQ9Y276 419 aa23.06■■□□□ 1.28
SDHA-205ENST00000504824 ZNF526Q8TF50 670 aaPredicted RBP23.05■■□□□ 1.28
SDHA-205ENST00000504824 MRC1P22897 1456 aa23.05■■□□□ 1.28
SDHA-205ENST00000504824 ADCY9O60503 1353 aa23.04■■□□□ 1.28
SDHA-205ENST00000504824 TEFQ10587 303 aa23.04■■□□□ 1.28
SDHA-205ENST00000504824 VIRMAQ69YN4 1812 aaKnown RBP23.03■■□□□ 1.28
SDHA-205ENST00000504824 N4BP2Q86UW6 1770 aaPredicted RBP23.03■■□□□ 1.28
SDHA-205ENST00000504824 ADAMTS7Q9UKP4 1686 aa23.03■■□□□ 1.28
SDHA-205ENST00000504824 USP42Q9H9J4 1324 aaKnown RBP23.03■■□□□ 1.28
SDHA-205ENST00000504824 A0A0G2JLW4 131 aa23.03■■□□□ 1.28
SDHA-205ENST00000504824 ZPR1O75312 459 aa23.02■■□□□ 1.28
SDHA-205ENST00000504824 DNAJC10Q8IXB1 793 aa23.02■■□□□ 1.28
SDHA-205ENST00000504824 SRP68Q9UHB9 627 aaKnown RBP23.02■■□□□ 1.28
SDHA-205ENST00000504824 RALBP1Q15311 655 aa23.01■■□□□ 1.27
SDHA-205ENST00000504824 DPEP1P16444 411 aa23■■□□□ 1.27
SDHA-205ENST00000504824 TTC5Q8N0Z6 440 aa23■■□□□ 1.27
SDHA-205ENST00000504824 INTS5Q6P9B9 1019 aaKnown RBP22.99■■□□□ 1.27
SDHA-205ENST00000504824 VSIG10Q8N0Z9 540 aa22.99■■□□□ 1.27
SDHA-205ENST00000504824 KIAA1551Q9HCM1 1747 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms