RNA–Protein interactions for RNA: ENST00000504823.5

FAM200B-208, Transcript of family with sequence similarity 200 member B, human

TSL 3

Gene FAM200B, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM200B-208	ENST00000504823	STK32B	Q9NY57	414 aa		14.12	□□□□□ -0.15
FAM200B-208	ENST00000504823	PAPPA	Q13219	1627 aa		14.12	□□□□□ -0.15
FAM200B-208	ENST00000504823	SBNO2	Q9Y2G9	1366 aa		14.11	□□□□□ -0.15
FAM200B-208	ENST00000504823	ZBTB7A	O95365	584 aa		14.11	□□□□□ -0.15
FAM200B-208	ENST00000504823	CSB-PGBD3	P0DP91	1061 aa		14.11	□□□□□ -0.15
FAM200B-208	ENST00000504823	KTN1	Q86UP2	1357 aa	Known RBP	14.1	□□□□□ -0.15
FAM200B-208	ENST00000504823	MTFR1L	Q9H019	292 aa		14.1	□□□□□ -0.15
FAM200B-208	ENST00000504823	MAP3K5	Q99683	1374 aa		14.09	□□□□□ -0.15
FAM200B-208	ENST00000504823	HOXB1	P14653	301 aa	Predicted RBP	14.09	□□□□□ -0.15
FAM200B-208	ENST00000504823	ERBB3	P21860	1342 aa		14.09	□□□□□ -0.15
FAM200B-208	ENST00000504823	ROCK2	O75116	1388 aa	Known RBP	14.09	□□□□□ -0.15
FAM200B-208	ENST00000504823	FAM205C	A6NFA0	338 aa		14.08	□□□□□ -0.16
FAM200B-208	ENST00000504823	RIMBP2	O15034	1052 aa		14.08	□□□□□ -0.16
FAM200B-208	ENST00000504823	PPP1R37	O75864	691 aa		14.08	□□□□□ -0.16
FAM200B-208	ENST00000504823	HS3ST6	Q96QI5	342 aa		14.08	□□□□□ -0.16
FAM200B-208	ENST00000504823	SYT17	Q9BSW7	474 aa		14.08	□□□□□ -0.16
FAM200B-208	ENST00000504823	CD163L1	Q9NR16	1453 aa		14.07	□□□□□ -0.16
FAM200B-208	ENST00000504823	POTEB3	A0JP26	581 aa		14.07	□□□□□ -0.16
FAM200B-208	ENST00000504823	POTEB	Q6S5H4	581 aa		14.07	□□□□□ -0.16
FAM200B-208	ENST00000504823	FHDC1	Q9C0D6	1143 aa	Predicted RBP	14.06	□□□□□ -0.16
FAM200B-208	ENST00000504823	LTN1	O94822	1766 aa		14.06	□□□□□ -0.16
FAM200B-208	ENST00000504823	QSER1	Q2KHR3	1735 aa		14.05	□□□□□ -0.16
FAM200B-208	ENST00000504823	IL2RB	P14784	551 aa		14.05	□□□□□ -0.16
FAM200B-208	ENST00000504823	ZNF784	Q8NCA9	323 aa	Predicted RBP	14.05	□□□□□ -0.16
FAM200B-208	ENST00000504823	BTAF1	O14981	1849 aa		14.05	□□□□□ -0.16
FAM200B-208	ENST00000504823	COL24A1	Q17RW2	1714 aa		14.04	□□□□□ -0.16
FAM200B-208	ENST00000504823	KIF3C	O14782	793 aa		14.04	□□□□□ -0.16
FAM200B-208	ENST00000504823	C2orf72	A6NCS6	295 aa		14.03	□□□□□ -0.16
FAM200B-208	ENST00000504823	ARX	Q96QS3	562 aa		14.03	□□□□□ -0.16
FAM200B-208	ENST00000504823	CHD4	Q14839	1912 aa		14.03	□□□□□ -0.16
FAM200B-208	ENST00000504823	FAM208A	Q9UK61	1670 aa	Known RBP	14.02	□□□□□ -0.16
FAM200B-208	ENST00000504823	EDC4	Q6P2E9	1401 aa	Known RBP	14.02	□□□□□ -0.16
FAM200B-208	ENST00000504823	ANKRD24	Q8TF21	1146 aa		14.02	□□□□□ -0.17
FAM200B-208	ENST00000504823	ACSBG1	Q96GR2	724 aa		14.02	□□□□□ -0.17
FAM200B-208	ENST00000504823	PUS7	Q96PZ0	661 aa	Known RBP	14.02	□□□□□ -0.17
FAM200B-208	ENST00000504823	SIN3A	Q96ST3	1273 aa		14.02	□□□□□ -0.17
FAM200B-208	ENST00000504823	ZSWIM6	Q9HCJ5	1215 aa		14.02	□□□□□ -0.17
FAM200B-208	ENST00000504823	NLRP2	Q9NX02	1062 aa		14.02	□□□□□ -0.17
FAM200B-208	ENST00000504823	ZNF827	Q17R98	1081 aa		14.01	□□□□□ -0.17
FAM200B-208	ENST00000504823	SLC27A3	Q5K4L6	730 aa		14.01	□□□□□ -0.17
FAM200B-208	ENST00000504823	NME9	Q86XW9	330 aa		14.01	□□□□□ -0.17
FAM200B-208	ENST00000504823	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
FAM200B-208	ENST00000504823	SLC16A10	Q8TF71	515 aa		14.01	□□□□□ -0.17
FAM200B-208	ENST00000504823	LRRC4B	Q9NT99	713 aa		14.01	□□□□□ -0.17
FAM200B-208	ENST00000504823	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	14	□□□□□ -0.17
FAM200B-208	ENST00000504823	NKX1-1	Q15270	411 aa	Predicted RBP	13.99	□□□□□ -0.17
FAM200B-208	ENST00000504823	GPR153	Q6NV75	609 aa		13.98	□□□□□ -0.17
FAM200B-208	ENST00000504823	IP6K1	Q92551	441 aa		13.98	□□□□□ -0.17
FAM200B-208	ENST00000504823		A0A1W2PP64	1363 aa		13.97	□□□□□ -0.17
FAM200B-208	ENST00000504823	TERF2IP	Q9NYB0	399 aa		13.97	□□□□□ -0.17
FAM200B-208	ENST00000504823	LY75	O60449	1722 aa		13.97	□□□□□ -0.17
FAM200B-208	ENST00000504823	CARD11	Q9BXL7	1154 aa		13.96	□□□□□ -0.17
FAM200B-208	ENST00000504823	SLC12A5	Q9H2X9	1139 aa		13.96	□□□□□ -0.17
FAM200B-208	ENST00000504823	CEP350	Q5VT06	3117 aa		13.96	□□□□□ -0.18
FAM200B-208	ENST00000504823	ANKRD36B	Q8N2N9	1353 aa		13.96	□□□□□ -0.18
FAM200B-208	ENST00000504823	PNPLA7	Q6ZV29	1317 aa		13.95	□□□□□ -0.18
FAM200B-208	ENST00000504823	C1QTNF8	P60827	252 aa		13.95	□□□□□ -0.18
FAM200B-208	ENST00000504823	NEUROD1	Q13562	356 aa		13.95	□□□□□ -0.18
FAM200B-208	ENST00000504823	TMC2	Q8TDI7	906 aa		13.95	□□□□□ -0.18
FAM200B-208	ENST00000504823	TMC1	Q8TDI8	760 aa		13.95	□□□□□ -0.18
FAM200B-208	ENST00000504823	NSD2	O96028	1365 aa		13.95	□□□□□ -0.18
FAM200B-208	ENST00000504823	POLD1	P28340	1107 aa		13.94	□□□□□ -0.18
FAM200B-208	ENST00000504823	SHANK3	Q9BYB0	1731 aa		13.94	□□□□□ -0.18
FAM200B-208	ENST00000504823	KRTAP3-3	Q9BYR6	98 aa		13.94	□□□□□ -0.18
FAM200B-208	ENST00000504823	KRTAP3-2	Q9BYR7	98 aa		13.94	□□□□□ -0.18
FAM200B-208	ENST00000504823	TUBGCP6	Q96RT7	1819 aa		13.94	□□□□□ -0.18
FAM200B-208	ENST00000504823	DOT1L	Q8TEK3	1739 aa		13.93	□□□□□ -0.18
FAM200B-208	ENST00000504823	GPR162	Q16538	588 aa		13.92	□□□□□ -0.18
FAM200B-208	ENST00000504823	ARSI	Q5FYB1	569 aa		13.92	□□□□□ -0.18
FAM200B-208	ENST00000504823	DDX54	Q8TDD1	881 aa	Known RBP	13.92	□□□□□ -0.18
FAM200B-208	ENST00000504823	SLC24A1	O60721	1099 aa		13.91	□□□□□ -0.18
FAM200B-208	ENST00000504823	HOXC9	P31274	260 aa		13.91	□□□□□ -0.18
FAM200B-208	ENST00000504823	VARS2	Q5ST30	1063 aa	Known RBP	13.91	□□□□□ -0.18
FAM200B-208	ENST00000504823	TFCP2L1	Q9NZI6	479 aa		13.91	□□□□□ -0.18
FAM200B-208	ENST00000504823	RTL1	A6NKG5	1358 aa		13.91	□□□□□ -0.18
FAM200B-208	ENST00000504823	MAP3K19	Q56UN5	1328 aa		13.9	□□□□□ -0.18
FAM200B-208	ENST00000504823	PRIM1	P49642	420 aa	Known RBP	13.9	□□□□□ -0.18
FAM200B-208	ENST00000504823	SPNS2	Q8IVW8	549 aa		13.9	□□□□□ -0.18
FAM200B-208	ENST00000504823	ZCRB1	Q8TBF4	217 aa	Known RBP	13.9	□□□□□ -0.18
FAM200B-208	ENST00000504823	MEGF6	O75095	1541 aa		13.9	□□□□□ -0.19
FAM200B-208	ENST00000504823	CGNL1	Q0VF96	1302 aa		13.9	□□□□□ -0.19
FAM200B-208	ENST00000504823	SENP3-EIF4A1	A0A087X0R7	540 aa		13.89	□□□□□ -0.19
FAM200B-208	ENST00000504823	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
FAM200B-208	ENST00000504823	COG3	Q96JB2	828 aa		13.89	□□□□□ -0.19
FAM200B-208	ENST00000504823	TESK2	Q96S53	571 aa		13.89	□□□□□ -0.19
FAM200B-208	ENST00000504823	HMGB2	P26583	209 aa	Known RBP	13.88	□□□□□ -0.19
FAM200B-208	ENST00000504823	LTV1	Q96GA3	475 aa	Predicted RBP	13.88	□□□□□ -0.19
FAM200B-208	ENST00000504823	RGPD2	P0DJD1	1756 aa		13.88	□□□□□ -0.19
FAM200B-208	ENST00000504823	KAT6B	Q8WYB5	2073 aa		13.87	□□□□□ -0.19
FAM200B-208	ENST00000504823	NLGN2	Q8NFZ4	835 aa		13.87	□□□□□ -0.19
FAM200B-208	ENST00000504823	SYTL4	Q96C24	671 aa	Predicted RBP	13.87	□□□□□ -0.19
FAM200B-208	ENST00000504823	GRIN3B	O60391	1043 aa		13.86	□□□□□ -0.19
FAM200B-208	ENST00000504823	GIGYF1	O75420	1035 aa	Predicted RBP	13.86	□□□□□ -0.19
FAM200B-208	ENST00000504823	AMPH	P49418	695 aa		13.86	□□□□□ -0.19
FAM200B-208	ENST00000504823	RYDEN	Q9NUL5	291 aa	Known RBP	13.86	□□□□□ -0.19
FAM200B-208	ENST00000504823	CCNL1	Q9UK58	526 aa	Predicted RBP	13.86	□□□□□ -0.19
FAM200B-208	ENST00000504823	C5	P01031	1676 aa		13.85	□□□□□ -0.19
FAM200B-208	ENST00000504823	USP47	Q96K76	1375 aa		13.85	□□□□□ -0.19
FAM200B-208	ENST00000504823	KCNQ4	P56696	695 aa		13.85	□□□□□ -0.19
FAM200B-208	ENST00000504823	COL23A1	Q86Y22	540 aa	Predicted RBP	13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms