RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 KLHL34Q8N239 644 aa19.14■□□□□ 0.65
HOXC9-202ENST00000504557 AK7Q96M32 723 aa19.14■□□□□ 0.65
HOXC9-202ENST00000504557 UBR3Q6ZT12 1888 aa19.14■□□□□ 0.65
HOXC9-202ENST00000504557 MTHFSDQ2M296 383 aaKnown RBP19.13■□□□□ 0.65
HOXC9-202ENST00000504557 AKAP4Q5JQC9 854 aa19.13■□□□□ 0.65
HOXC9-202ENST00000504557 NFATC2IPQ8NCF5 419 aa19.13■□□□□ 0.65
HOXC9-202ENST00000504557 MSL1Q68DK7 614 aa19.12■□□□□ 0.65
HOXC9-202ENST00000504557 COL23A1Q86Y22 540 aaPredicted RBP19.12■□□□□ 0.65
HOXC9-202ENST00000504557 LINC00116Q8NCU8 138 aa19.12■□□□□ 0.65
HOXC9-202ENST00000504557 LGR6Q9HBX8 967 aa19.12■□□□□ 0.65
HOXC9-202ENST00000504557 PTCD1O75127 700 aaKnown RBP19.11■□□□□ 0.65
HOXC9-202ENST00000504557 ITPK1Q13572 414 aa19.11■□□□□ 0.65
HOXC9-202ENST00000504557 U2AF1L5P0DN76 240 aaPredicted RBP19.1■□□□□ 0.65
HOXC9-202ENST00000504557 U2AF1Q01081 240 aaKnown RBP eCLIP19.1■□□□□ 0.65
HOXC9-202ENST00000504557 NUDCQ9Y266 331 aa19.1■□□□□ 0.65
HOXC9-202ENST00000504557 PRKAR2BP31323 418 aa19.09■□□□□ 0.65
HOXC9-202ENST00000504557 RNMTO43148 476 aaKnown RBP19.08■□□□□ 0.64
HOXC9-202ENST00000504557 POLD1P28340 1107 aa19.08■□□□□ 0.64
HOXC9-202ENST00000504557 AMIGO3Q86WK7 504 aa19.08■□□□□ 0.64
HOXC9-202ENST00000504557 ARXQ96QS3 562 aa19.08■□□□□ 0.64
HOXC9-202ENST00000504557 FHDC1Q9C0D6 1143 aaPredicted RBP19.08■□□□□ 0.64
HOXC9-202ENST00000504557 COL5A3P25940 1745 aaPredicted RBP19.08■□□□□ 0.64
HOXC9-202ENST00000504557 GNPATO15228 680 aa19.07■□□□□ 0.64
HOXC9-202ENST00000504557 SLC16A10Q8TF71 515 aa19.07■□□□□ 0.64
HOXC9-202ENST00000504557 SGIP1Q9BQI5 828 aa19.07■□□□□ 0.64
HOXC9-202ENST00000504557 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.06■□□□□ 0.64
HOXC9-202ENST00000504557 SLC4A9Q96Q91 983 aa19.06■□□□□ 0.64
HOXC9-202ENST00000504557 SLC52A2Q9HAB3 445 aa19.06■□□□□ 0.64
HOXC9-202ENST00000504557 MYH14Q7Z406 1995 aaKnown RBP19.06■□□□□ 0.64
HOXC9-202ENST00000504557 COL24A1Q17RW2 1714 aa19.05■□□□□ 0.64
HOXC9-202ENST00000504557 HMGB2P26583 209 aaKnown RBP19.05■□□□□ 0.64
HOXC9-202ENST00000504557 SLC39A6Q13433 755 aa19.05■□□□□ 0.64
HOXC9-202ENST00000504557 GAS2L2Q8NHY3 880 aa19.05■□□□□ 0.64
HOXC9-202ENST00000504557 PHACTR3Q96KR7 559 aa19.05■□□□□ 0.64
HOXC9-202ENST00000504557 RSPH6AQ9H0K4 717 aa19.05■□□□□ 0.64
HOXC9-202ENST00000504557 MAP3K5Q99683 1374 aa19.05■□□□□ 0.64
HOXC9-202ENST00000504557 TJP1Q07157 1748 aa19.04■□□□□ 0.64
HOXC9-202ENST00000504557 FLAD1Q8NFF5 587 aa19.04■□□□□ 0.64
HOXC9-202ENST00000504557 ZNF831Q5JPB2 1677 aa19.04■□□□□ 0.64
HOXC9-202ENST00000504557 DCAF8L1A6NGE4 600 aa19.03■□□□□ 0.64
HOXC9-202ENST00000504557 GNAT3A8MTJ3 354 aa19.03■□□□□ 0.64
HOXC9-202ENST00000504557 DLG5Q8TDM6 1919 aa19.02■□□□□ 0.64
HOXC9-202ENST00000504557 ADAMTS7Q9UKP4 1686 aa19.02■□□□□ 0.64
HOXC9-202ENST00000504557 SYT17Q9BSW7 474 aa19.02■□□□□ 0.64
HOXC9-202ENST00000504557 MRC1P22897 1456 aa19.02■□□□□ 0.63
HOXC9-202ENST00000504557 TEFQ10587 303 aa19.01■□□□□ 0.63
HOXC9-202ENST00000504557 SIPA1L3O60292 1781 aaPredicted RBP19.01■□□□□ 0.63
HOXC9-202ENST00000504557 SSFA2P28290 1259 aa19■□□□□ 0.63
HOXC9-202ENST00000504557 ZEB1P37275 1124 aaPredicted RBP19■□□□□ 0.63
HOXC9-202ENST00000504557 RTCBQ9Y3I0 505 aaKnown RBP19■□□□□ 0.63
HOXC9-202ENST00000504557 IL17REQ8NFR9 667 aa18.99■□□□□ 0.63
HOXC9-202ENST00000504557 C4AP0C0L4 1744 aa18.99■□□□□ 0.63
HOXC9-202ENST00000504557 FCHSD2O94868 740 aa18.98■□□□□ 0.63
HOXC9-202ENST00000504557 DNAJC10Q8IXB1 793 aa18.98■□□□□ 0.63
HOXC9-202ENST00000504557 PELP1Q8IZL8 1130 aaKnown RBP18.98■□□□□ 0.63
HOXC9-202ENST00000504557 UBR2Q8IWV8 1755 aa18.98■□□□□ 0.63
HOXC9-202ENST00000504557 NEFMP07197 916 aa18.97■□□□□ 0.63
HOXC9-202ENST00000504557 CRKLP46109 303 aaKnown RBP18.97■□□□□ 0.63
HOXC9-202ENST00000504557 RALBP1Q15311 655 aa18.97■□□□□ 0.63
HOXC9-202ENST00000504557 TRAPPC3LQ5T215 181 aa18.97■□□□□ 0.63
HOXC9-202ENST00000504557 TTC5Q8N0Z6 440 aa18.97■□□□□ 0.63
HOXC9-202ENST00000504557 CNTNAP4Q9C0A0 1308 aa18.97■□□□□ 0.63
HOXC9-202ENST00000504557 KCPQ6ZWJ8 1503 aa18.96■□□□□ 0.63
HOXC9-202ENST00000504557 MCM10Q7L590 875 aa18.96■□□□□ 0.63
HOXC9-202ENST00000504557 RTF1Q92541 710 aaKnown RBP18.96■□□□□ 0.63
HOXC9-202ENST00000504557 DCTN1Q14203 1278 aa18.95■□□□□ 0.62
HOXC9-202ENST00000504557 CICQ96RK0 1608 aaPredicted RBP18.94■□□□□ 0.62
HOXC9-202ENST00000504557 RPS6KA4O75676 772 aa18.94■□□□□ 0.62
HOXC9-202ENST00000504557 RFC4P35249 363 aa18.94■□□□□ 0.62
HOXC9-202ENST00000504557 RC3H1Q5TC82 1133 aaKnown RBP18.94■□□□□ 0.62
HOXC9-202ENST00000504557 NLGN2Q8NFZ4 835 aa18.94■□□□□ 0.62
HOXC9-202ENST00000504557 ARHGEF1Q92888 912 aaKnown RBP18.94■□□□□ 0.62
HOXC9-202ENST00000504557 MYBBP1AQ9BQG0 1328 aaKnown RBP18.93■□□□□ 0.62
HOXC9-202ENST00000504557 BTBD11A6QL63 1104 aa18.92■□□□□ 0.62
HOXC9-202ENST00000504557 KCNQ3O43525 872 aa18.91■□□□□ 0.62
HOXC9-202ENST00000504557 GPR162Q16538 588 aa18.91■□□□□ 0.62
HOXC9-202ENST00000504557 CCDC87Q9NVE4 849 aa18.91■□□□□ 0.62
HOXC9-202ENST00000504557 SRP68Q9UHB9 627 aaKnown RBP18.91■□□□□ 0.62
HOXC9-202ENST00000504557 WWC3Q9ULE0 1092 aa18.91■□□□□ 0.62
HOXC9-202ENST00000504557 MAPK8IP3Q9UPT6 1336 aa18.91■□□□□ 0.62
HOXC9-202ENST00000504557 MMP10P09238 476 aa18.9■□□□□ 0.62
HOXC9-202ENST00000504557 INTS5Q6P9B9 1019 aaKnown RBP18.9■□□□□ 0.62
HOXC9-202ENST00000504557 ZNF790Q6PG37 636 aa18.9■□□□□ 0.62
HOXC9-202ENST00000504557 ZNF496Q96IT1 587 aaPredicted RBP18.9■□□□□ 0.62
HOXC9-202ENST00000504557 CEMIPQ8WUJ3 1361 aa18.9■□□□□ 0.62
HOXC9-202ENST00000504557 CHD4Q14839 1912 aa18.9■□□□□ 0.62
HOXC9-202ENST00000504557 CYP19A1P11511 503 aaPredicted RBP18.89■□□□□ 0.61
HOXC9-202ENST00000504557 ADRA2BP18089 450 aa18.89■□□□□ 0.61
HOXC9-202ENST00000504557 CANXP27824 592 aaKnown RBP18.89■□□□□ 0.61
HOXC9-202ENST00000504557 ZNF330Q9Y3S2 320 aaPredicted RBP18.89■□□□□ 0.61
HOXC9-202ENST00000504557 ZBTB1Q9Y2K1 713 aa18.88■□□□□ 0.61
HOXC9-202ENST00000504557 GYS1P13807 737 aa18.87■□□□□ 0.61
HOXC9-202ENST00000504557 YY1P25490 414 aa18.87■□□□□ 0.61
HOXC9-202ENST00000504557 CCDC146Q8IYE0 955 aa18.87■□□□□ 0.61
HOXC9-202ENST00000504557 PLEKHF1Q96S99 279 aa18.87■□□□□ 0.61
HOXC9-202ENST00000504557 HEG1Q9ULI3 1381 aa18.87■□□□□ 0.61
HOXC9-202ENST00000504557 N4BP2Q86UW6 1770 aaPredicted RBP18.86■□□□□ 0.61
HOXC9-202ENST00000504557 VSIG10Q8N0Z9 540 aa18.86■□□□□ 0.61
HOXC9-202ENST00000504557 FMNL2Q96PY5 1086 aa18.86■□□□□ 0.61
HOXC9-202ENST00000504557 THUMPD2Q9BTF0 503 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms