RNA–Protein interactions for RNA: ENST00000503682.5

COPS4-202, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5 BASIC

Gene COPS4, Length 1,702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-202ENST00000503682 ATG3Q9NT62 314 aa13.81□□□□□ -0.2
COPS4-202ENST00000503682 KDRP35968 1356 aa13.8□□□□□ -0.2
COPS4-202ENST00000503682 UBR3Q6ZT12 1888 aa13.8□□□□□ -0.2
COPS4-202ENST00000503682 DIAPH1O60610 1272 aaKnown RBP13.8□□□□□ -0.2
COPS4-202ENST00000503682 SMARCC1Q92922 1105 aaPredicted RBP13.8□□□□□ -0.2
COPS4-202ENST00000503682 FHDC1Q9C0D6 1143 aaPredicted RBP13.8□□□□□ -0.2
COPS4-202ENST00000503682 SCN11AQ9UI33 1791 aa13.8□□□□□ -0.2
COPS4-202ENST00000503682 LOC102724428A0A0B4J2F2 783 aa13.79□□□□□ -0.2
COPS4-202ENST00000503682 SIK1P57059 783 aa13.79□□□□□ -0.2
COPS4-202ENST00000503682 ITPK1Q13572 414 aa13.79□□□□□ -0.2
COPS4-202ENST00000503682 AMOTQ4VCS5 1084 aa13.79□□□□□ -0.2
COPS4-202ENST00000503682 MSL1Q68DK7 614 aa13.79□□□□□ -0.2
COPS4-202ENST00000503682 KLHL34Q8N239 644 aa13.79□□□□□ -0.2
COPS4-202ENST00000503682 LINC00116Q8NCU8 138 aa13.79□□□□□ -0.2
COPS4-202ENST00000503682 GOLGB1Q14789 3259 aaKnown RBP13.79□□□□□ -0.2
COPS4-202ENST00000503682 COL24A1Q17RW2 1714 aa13.79□□□□□ -0.2
COPS4-202ENST00000503682 COL3A1P02461 1466 aaPredicted RBP13.79□□□□□ -0.2
COPS4-202ENST00000503682 PHF14O94880 888 aa13.78□□□□□ -0.2
COPS4-202ENST00000503682 C1orf141Q5JVX7 400 aa13.78□□□□□ -0.2
COPS4-202ENST00000503682 DCAF5Q96JK2 942 aa13.78□□□□□ -0.2
COPS4-202ENST00000503682 ARXQ96QS3 562 aa13.78□□□□□ -0.2
COPS4-202ENST00000503682 NPC1L1Q9UHC9 1359 aa13.78□□□□□ -0.2
COPS4-202ENST00000503682 U2SURPO15042 1029 aaKnown RBP13.78□□□□□ -0.2
COPS4-202ENST00000503682 ATP6V1AP38606 617 aa13.78□□□□□ -0.2
COPS4-202ENST00000503682 CABP4P57796 275 aa13.78□□□□□ -0.2
COPS4-202ENST00000503682 SLC4A9Q96Q91 983 aa13.78□□□□□ -0.2
COPS4-202ENST00000503682 SYT17Q9BSW7 474 aa13.78□□□□□ -0.2
COPS4-202ENST00000503682 NFATC2IPQ8NCF5 419 aa13.77□□□□□ -0.21
COPS4-202ENST00000503682 RBM42Q9BTD8 480 aaKnown RBP13.77□□□□□ -0.21
COPS4-202ENST00000503682 LGR6Q9HBX8 967 aa13.77□□□□□ -0.21
COPS4-202ENST00000503682 ERVV-2B6SEH9 535 aa13.76□□□□□ -0.21
COPS4-202ENST00000503682 HSP90AB1P08238 724 aaKnown RBP13.76□□□□□ -0.21
COPS4-202ENST00000503682 MTHFSDQ2M296 383 aaKnown RBP13.76□□□□□ -0.21
COPS4-202ENST00000503682 SLC16A10Q8TF71 515 aa13.76□□□□□ -0.21
COPS4-202ENST00000503682 AK7Q96M32 723 aa13.76□□□□□ -0.21
COPS4-202ENST00000503682 MYH14Q7Z406 1995 aaKnown RBP13.75□□□□□ -0.21
COPS4-202ENST00000503682 PLEKHG2Q9H7P9 1386 aa13.75□□□□□ -0.21
COPS4-202ENST00000503682 COL5A3P25940 1745 aaPredicted RBP13.75□□□□□ -0.21
COPS4-202ENST00000503682 PTCD1O75127 700 aaKnown RBP13.74□□□□□ -0.21
COPS4-202ENST00000503682 PPP2R1AP30153 589 aa13.74□□□□□ -0.21
COPS4-202ENST00000503682 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.73□□□□□ -0.21
COPS4-202ENST00000503682 GNPATO15228 680 aa13.73□□□□□ -0.21
COPS4-202ENST00000503682 POLD1P28340 1107 aa13.73□□□□□ -0.21
COPS4-202ENST00000503682 AKAP4Q5JQC9 854 aa13.73□□□□□ -0.21
COPS4-202ENST00000503682 RNF39Q9H2S5 420 aa13.73□□□□□ -0.21
COPS4-202ENST00000503682 RNMTO43148 476 aaKnown RBP13.72□□□□□ -0.21
COPS4-202ENST00000503682 NLGN2Q8NFZ4 835 aa13.72□□□□□ -0.21
COPS4-202ENST00000503682 TJP1Q07157 1748 aa13.72□□□□□ -0.21
COPS4-202ENST00000503682 SLC39A6Q13433 755 aa13.71□□□□□ -0.21
COPS4-202ENST00000503682 PHACTR3Q96KR7 559 aa13.7□□□□□ -0.22
COPS4-202ENST00000503682 ZNF831Q5JPB2 1677 aa13.7□□□□□ -0.22
COPS4-202ENST00000503682 SLC52A2Q9HAB3 445 aa13.7□□□□□ -0.22
COPS4-202ENST00000503682 ADAMTS7Q9UKP4 1686 aa13.69□□□□□ -0.22
COPS4-202ENST00000503682 PRKAR2BP31323 418 aa13.69□□□□□ -0.22
COPS4-202ENST00000503682 PELP1Q8IZL8 1130 aaKnown RBP13.69□□□□□ -0.22
COPS4-202ENST00000503682 FLAD1Q8NFF5 587 aa13.69□□□□□ -0.22
COPS4-202ENST00000503682 CFAP53Q96M91 514 aa13.69□□□□□ -0.22
COPS4-202ENST00000503682 C4AP0C0L4 1744 aa13.69□□□□□ -0.22
COPS4-202ENST00000503682 SSFA2P28290 1259 aa13.68□□□□□ -0.22
COPS4-202ENST00000503682 RSPH6AQ9H0K4 717 aa13.68□□□□□ -0.22
COPS4-202ENST00000503682 U2AF1L5P0DN76 240 aaPredicted RBP13.67□□□□□ -0.22
COPS4-202ENST00000503682 YY1P25490 414 aa13.67□□□□□ -0.22
COPS4-202ENST00000503682 U2AF1Q01081 240 aaKnown RBP eCLIP13.67□□□□□ -0.22
COPS4-202ENST00000503682 DDX10Q13206 875 aaKnown RBP13.67□□□□□ -0.22
COPS4-202ENST00000503682 IL17REQ8NFR9 667 aa13.67□□□□□ -0.22
COPS4-202ENST00000503682 MRC1P22897 1456 aa13.67□□□□□ -0.22
COPS4-202ENST00000503682 DNAJC10Q8IXB1 793 aa13.67□□□□□ -0.22
COPS4-202ENST00000503682 WWC3Q9ULE0 1092 aa13.67□□□□□ -0.22
COPS4-202ENST00000503682 RTCBQ9Y3I0 505 aaKnown RBP13.67□□□□□ -0.22
COPS4-202ENST00000503682 MAP3K5Q99683 1374 aa13.67□□□□□ -0.22
COPS4-202ENST00000503682 SIPA1L3O60292 1781 aaPredicted RBP13.67□□□□□ -0.22
COPS4-202ENST00000503682 TRAPPC3LQ5T215 181 aa13.66□□□□□ -0.22
COPS4-202ENST00000503682 ARHGEF1Q92888 912 aaKnown RBP13.66□□□□□ -0.22
COPS4-202ENST00000503682 CHD4Q14839 1912 aa13.66□□□□□ -0.22
COPS4-202ENST00000503682 CRKLP46109 303 aaKnown RBP13.65□□□□□ -0.22
COPS4-202ENST00000503682 GPR162Q16538 588 aa13.65□□□□□ -0.22
COPS4-202ENST00000503682 KCPQ6ZWJ8 1503 aa13.65□□□□□ -0.22
COPS4-202ENST00000503682 UBR2Q8IWV8 1755 aa13.65□□□□□ -0.22
COPS4-202ENST00000503682 CNTNAP4Q9C0A0 1308 aa13.65□□□□□ -0.22
COPS4-202ENST00000503682 GNAT3A8MTJ3 354 aa13.64□□□□□ -0.23
COPS4-202ENST00000503682 HMGB2P26583 209 aaKnown RBP13.64□□□□□ -0.23
COPS4-202ENST00000503682 NUDCQ9Y266 331 aa13.64□□□□□ -0.23
COPS4-202ENST00000503682 DLG5Q8TDM6 1919 aa13.64□□□□□ -0.23
COPS4-202ENST00000503682 RPS6KA4O75676 772 aa13.64□□□□□ -0.23
COPS4-202ENST00000503682 RC3H1Q5TC82 1133 aaKnown RBP13.64□□□□□ -0.23
COPS4-202ENST00000503682 GAS2L2Q8NHY3 880 aa13.64□□□□□ -0.23
COPS4-202ENST00000503682 SRP68Q9UHB9 627 aaKnown RBP13.64□□□□□ -0.23
COPS4-202ENST00000503682 DCTN1Q14203 1278 aa13.63□□□□□ -0.23
COPS4-202ENST00000503682 INTS5Q6P9B9 1019 aaKnown RBP13.63□□□□□ -0.23
COPS4-202ENST00000503682 CICQ96RK0 1608 aaPredicted RBP13.63□□□□□ -0.23
COPS4-202ENST00000503682 KCNQ3O43525 872 aa13.62□□□□□ -0.23
COPS4-202ENST00000503682 MMP10P09238 476 aa13.62□□□□□ -0.23
COPS4-202ENST00000503682 RFC4P35249 363 aa13.62□□□□□ -0.23
COPS4-202ENST00000503682 TEFQ10587 303 aa13.62□□□□□ -0.23
COPS4-202ENST00000503682 GYS1P13807 737 aa13.61□□□□□ -0.23
COPS4-202ENST00000503682 YBX3P16989 372 aaKnown RBP eCLIP13.61□□□□□ -0.23
COPS4-202ENST00000503682 MCM10Q7L590 875 aa13.61□□□□□ -0.23
COPS4-202ENST00000503682 N4BP2Q86UW6 1770 aaPredicted RBP13.61□□□□□ -0.23
COPS4-202ENST00000503682 CYP19A1P11511 503 aaPredicted RBP13.61□□□□□ -0.23
COPS4-202ENST00000503682 ZNF496Q96IT1 587 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms