RNA–Protein interactions for RNA: ENST00000503620.1

PAPD4-206, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 3

Gene PAPD4, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-206ENST00000503620 PIM2Q9P1W9 311 aa12.05□□□□□ -0.48
PAPD4-206ENST00000503620 CD163L1Q9NR16 1453 aa12.05□□□□□ -0.48
PAPD4-206ENST00000503620 DALRD3Q5D0E6 543 aaKnown RBP12.04□□□□□ -0.48
PAPD4-206ENST00000503620 AIDAQ96BJ3 306 aa12.04□□□□□ -0.48
PAPD4-206ENST00000503620 CUL9Q8IWT3 2517 aa12.04□□□□□ -0.48
PAPD4-206ENST00000503620 MON2Q7Z3U7 1717 aa12.03□□□□□ -0.48
PAPD4-206ENST00000503620 GYS1P13807 737 aa12.03□□□□□ -0.48
PAPD4-206ENST00000503620 HMGB2P26583 209 aaKnown RBP12.03□□□□□ -0.48
PAPD4-206ENST00000503620 CHADLQ6NUI6 762 aa12.03□□□□□ -0.48
PAPD4-206ENST00000503620 GNPATO15228 680 aa12.02□□□□□ -0.49
PAPD4-206ENST00000503620 MPRIPQ6WCQ1 1025 aa12.02□□□□□ -0.49
PAPD4-206ENST00000503620 PIGBQ92521 554 aa12.02□□□□□ -0.49
PAPD4-206ENST00000503620 KTN1Q86UP2 1357 aaKnown RBP12.02□□□□□ -0.49
PAPD4-206ENST00000503620 RGPD2P0DJD1 1756 aa12.02□□□□□ -0.49
PAPD4-206ENST00000503620 LOC102724428A0A0B4J2F2 783 aa12.01□□□□□ -0.49
PAPD4-206ENST00000503620 CYP27B1O15528 508 aa12.01□□□□□ -0.49
PAPD4-206ENST00000503620 ITGBL1O95965 494 aaPredicted RBP12.01□□□□□ -0.49
PAPD4-206ENST00000503620 CHRNA5P30532 468 aa12.01□□□□□ -0.49
PAPD4-206ENST00000503620 SIK1P57059 783 aa12.01□□□□□ -0.49
PAPD4-206ENST00000503620 TMF1P82094 1093 aa12.01□□□□□ -0.49
PAPD4-206ENST00000503620 NLGN1Q8N2Q7 840 aa12.01□□□□□ -0.49
PAPD4-206ENST00000503620 CCDC87Q9NVE4 849 aa12.01□□□□□ -0.49
PAPD4-206ENST00000503620 THSD7BQ9C0I4 1608 aa12□□□□□ -0.49
PAPD4-206ENST00000503620 TIAM2Q8IVF5 1701 aa12□□□□□ -0.49
PAPD4-206ENST00000503620 RASSF10A6NK89 507 aa12□□□□□ -0.49
PAPD4-206ENST00000503620 LMNB1P20700 586 aa12□□□□□ -0.49
PAPD4-206ENST00000503620 SMARCC1Q92922 1105 aaPredicted RBP12□□□□□ -0.49
PAPD4-206ENST00000503620 LTV1Q96GA3 475 aaPredicted RBP12□□□□□ -0.49
PAPD4-206ENST00000503620 ITGB4P16144 1822 aa12□□□□□ -0.49
PAPD4-206ENST00000503620 A0A0C4DFX4 3053 aa11.99□□□□□ -0.49
PAPD4-206ENST00000503620 NFKBIEO00221 500 aa11.99□□□□□ -0.49
PAPD4-206ENST00000503620 DDR1Q08345 913 aa11.99□□□□□ -0.49
PAPD4-206ENST00000503620 NBPF6Q5VWK0 638 aa11.99□□□□□ -0.49
PAPD4-206ENST00000503620 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.99□□□□□ -0.49
PAPD4-206ENST00000503620 NBPF4Q96M43 638 aa11.99□□□□□ -0.49
PAPD4-206ENST00000503620 SLC4A9Q96Q91 983 aa11.99□□□□□ -0.49
PAPD4-206ENST00000503620 KDRP35968 1356 aa11.98□□□□□ -0.49
PAPD4-206ENST00000503620 ARHGEF1Q92888 912 aaKnown RBP11.98□□□□□ -0.49
PAPD4-206ENST00000503620 CGNL1Q0VF96 1302 aa11.97□□□□□ -0.49
PAPD4-206ENST00000503620 HOXC9P31274 260 aa11.97□□□□□ -0.49
PAPD4-206ENST00000503620 PRPF38BQ5VTL8 546 aaKnown RBP11.97□□□□□ -0.49
PAPD4-206ENST00000503620 MCOLN1Q9GZU1 580 aa11.97□□□□□ -0.49
PAPD4-206ENST00000503620 LTBP1Q14766 1721 aa11.97□□□□□ -0.49
PAPD4-206ENST00000503620 MAP3K19Q56UN5 1328 aa11.96□□□□□ -0.49
PAPD4-206ENST00000503620 EVC2Q86UK5 1308 aa11.96□□□□□ -0.49
PAPD4-206ENST00000503620 TMEM88BA6NKF7 163 aa11.96□□□□□ -0.49
PAPD4-206ENST00000503620 FBLN1P23142 703 aa11.95□□□□□ -0.5
PAPD4-206ENST00000503620 NKX1-1Q15270 411 aaPredicted RBP11.95□□□□□ -0.5
PAPD4-206ENST00000503620 USHBP1Q8N6Y0 703 aa11.95□□□□□ -0.5
PAPD4-206ENST00000503620 ASAP1Q9ULH1 1129 aa11.95□□□□□ -0.5
PAPD4-206ENST00000503620 ADAMTSL1Q8N6G6 1762 aa11.95□□□□□ -0.5
PAPD4-206ENST00000503620 PCDH11XQ9BZA7 1347 aa11.94□□□□□ -0.5
PAPD4-206ENST00000503620 PCDH11YQ9BZA8 1340 aa11.94□□□□□ -0.5
PAPD4-206ENST00000503620 WDR33Q9C0J8 1336 aaKnown RBP11.94□□□□□ -0.5
PAPD4-206ENST00000503620 MAP2K1Q02750 393 aaPredicted RBP11.94□□□□□ -0.5
PAPD4-206ENST00000503620 TRAPPC3LQ5T215 181 aa11.94□□□□□ -0.5
PAPD4-206ENST00000503620 PARP3Q9Y6F1 533 aa11.94□□□□□ -0.5
PAPD4-206ENST00000503620 SZT2Q5T011 3432 aa11.94□□□□□ -0.5
PAPD4-206ENST00000503620 ADRA2BP18089 450 aa11.93□□□□□ -0.5
PAPD4-206ENST00000503620 ATP6V1AP38606 617 aa11.92□□□□□ -0.5
PAPD4-206ENST00000503620 FKBP8Q14318 412 aa11.92□□□□□ -0.5
PAPD4-206ENST00000503620 MYH14Q7Z406 1995 aaKnown RBP11.92□□□□□ -0.5
PAPD4-206ENST00000503620 CCDC88AQ3V6T2 1871 aa11.91□□□□□ -0.5
PAPD4-206ENST00000503620 ADAMTS7Q9UKP4 1686 aa11.91□□□□□ -0.5
PAPD4-206ENST00000503620 POLRMTO00411 1230 aaKnown RBP11.91□□□□□ -0.5
PAPD4-206ENST00000503620 DEFB115Q30KQ5 88 aa11.91□□□□□ -0.5
PAPD4-206ENST00000503620 RC3H1Q5TC82 1133 aaKnown RBP11.91□□□□□ -0.5
PAPD4-206ENST00000503620 LDHDQ86WU2 507 aa11.91□□□□□ -0.5
PAPD4-206ENST00000503620 ATG3Q9NT62 314 aa11.91□□□□□ -0.5
PAPD4-206ENST00000503620 TSKSQ9UJT2 592 aa11.91□□□□□ -0.5
PAPD4-206ENST00000503620 RTCBQ9Y3I0 505 aaKnown RBP11.91□□□□□ -0.5
PAPD4-206ENST00000503620 EDC4Q6P2E9 1401 aaKnown RBP11.91□□□□□ -0.5
PAPD4-206ENST00000503620 ZNF831Q5JPB2 1677 aa11.91□□□□□ -0.5
PAPD4-206ENST00000503620 RPS6KA4O75676 772 aa11.9□□□□□ -0.5
PAPD4-206ENST00000503620 DDNO94850 711 aaPredicted RBP11.9□□□□□ -0.5
PAPD4-206ENST00000503620 COL5A3P25940 1745 aaPredicted RBP11.9□□□□□ -0.5
PAPD4-206ENST00000503620 TM4SF1P30408 202 aa11.9□□□□□ -0.5
PAPD4-206ENST00000503620 L3MBTL3Q96JM7 780 aaPredicted RBP11.9□□□□□ -0.5
PAPD4-206ENST00000503620 SRP68Q9UHB9 627 aaKnown RBP11.9□□□□□ -0.5
PAPD4-206ENST00000503620 MKI67P46013 3256 aaKnown RBP11.9□□□□□ -0.5
PAPD4-206ENST00000503620 DLEC1Q9Y238 1755 aa11.9□□□□□ -0.51
PAPD4-206ENST00000503620 CNTNAP4Q9C0A0 1308 aa11.89□□□□□ -0.51
PAPD4-206ENST00000503620 NCAPD2Q15021 1401 aa11.89□□□□□ -0.51
PAPD4-206ENST00000503620 TAF1DQ9H5J8 278 aaPredicted RBP11.89□□□□□ -0.51
PAPD4-206ENST00000503620 USP42Q9H9J4 1324 aaKnown RBP11.88□□□□□ -0.51
PAPD4-206ENST00000503620 DICER1Q9UPY3 1922 aaKnown RBP11.88□□□□□ -0.51
PAPD4-206ENST00000503620 DPY19L2Q6NUT2 758 aa11.88□□□□□ -0.51
PAPD4-206ENST00000503620 RAPGEF4Q8WZA2 1011 aa11.88□□□□□ -0.51
PAPD4-206ENST00000503620 RTL1A6NKG5 1358 aa11.88□□□□□ -0.51
PAPD4-206ENST00000503620 NRXN2Q9P2S2 1712 aa11.87□□□□□ -0.51
PAPD4-206ENST00000503620 TATP17735 454 aaPredicted RBP11.87□□□□□ -0.51
PAPD4-206ENST00000503620 CFAP44Q96MT7 982 aa11.87□□□□□ -0.51
PAPD4-206ENST00000503620 CASP8AP2Q9UKL3 1982 aa11.87□□□□□ -0.51
PAPD4-206ENST00000503620 SMG6Q86US8 1419 aaKnown RBP11.86□□□□□ -0.51
PAPD4-206ENST00000503620 RFC4P35249 363 aa11.86□□□□□ -0.51
PAPD4-206ENST00000503620 A0A1W2PP64 1363 aa11.86□□□□□ -0.51
PAPD4-206ENST00000503620 FER1L6Q2WGJ9 1857 aa11.85□□□□□ -0.51
PAPD4-206ENST00000503620 SOX10P56693 466 aa11.85□□□□□ -0.51
PAPD4-206ENST00000503620 ERFEQ4G0M1 354 aa11.85□□□□□ -0.51
PAPD4-206ENST00000503620 TTLL6Q8N841 843 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms