RNA–Protein interactions for RNA: ENST00000503362.1

SPCS3-201, Transcript of signal peptidase complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS3, Length 4,571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-201ENST00000503362 CLCN1P35523 988 aa15.85■□□□□ 0.13
SPCS3-201ENST00000503362 BLOC1S2Q6QNY1 142 aa15.85■□□□□ 0.13
SPCS3-201ENST00000503362 DNAAF4Q8WXU2 420 aa15.85■□□□□ 0.13
SPCS3-201ENST00000503362 TRIM5Q9C035 493 aa15.85■□□□□ 0.13
SPCS3-201ENST00000503362 MTHFSDQ2M296 383 aaKnown RBP15.84■□□□□ 0.13
SPCS3-201ENST00000503362 KRT85P78386 507 aa15.84■□□□□ 0.13
SPCS3-201ENST00000503362 CHMP4CQ96CF2 233 aa15.84■□□□□ 0.13
SPCS3-201ENST00000503362 MPRIPQ6WCQ1 1025 aa15.84■□□□□ 0.13
SPCS3-201ENST00000503362 USP26Q9BXU7 913 aa15.84■□□□□ 0.13
SPCS3-201ENST00000503362 APPP05067 770 aa15.84■□□□□ 0.13
SPCS3-201ENST00000503362 RRAGDQ9NQL2 400 aaPredicted RBP15.84■□□□□ 0.13
SPCS3-201ENST00000503362 LRRFIP1Q32MZ4 808 aaKnown RBP15.83■□□□□ 0.13
SPCS3-201ENST00000503362 BCL11BQ9C0K0 894 aaPredicted RBP15.83■□□□□ 0.12
SPCS3-201ENST00000503362 MYOM2P54296 1465 aa15.83■□□□□ 0.12
SPCS3-201ENST00000503362 PI4KAP2A4QPH2 592 aa15.83■□□□□ 0.12
SPCS3-201ENST00000503362 WASHC4Q2M389 1173 aa15.83■□□□□ 0.12
SPCS3-201ENST00000503362 PI4KAP1Q8N8J0 262 aa15.83■□□□□ 0.12
SPCS3-201ENST00000503362 CCDC192P0DO97 292 aa15.82■□□□□ 0.12
SPCS3-201ENST00000503362 ESYT1Q9BSJ8 1104 aa15.82■□□□□ 0.12
SPCS3-201ENST00000503362 G2E3Q7L622 706 aa15.82■□□□□ 0.12
SPCS3-201ENST00000503362 ZSCAN31Q96LW9 406 aaPredicted RBP15.82■□□□□ 0.12
SPCS3-201ENST00000503362 USP19O94966 1318 aa15.81■□□□□ 0.12
SPCS3-201ENST00000503362 UQCRHLA0A096LP55 91 aa15.81■□□□□ 0.12
SPCS3-201ENST00000503362 UQCRHP07919 91 aa15.81■□□□□ 0.12
SPCS3-201ENST00000503362 SDF4Q9BRK5 362 aa15.81■□□□□ 0.12
SPCS3-201ENST00000503362 BOLA2Q9H3K6 86 aa15.81■□□□□ 0.12
SPCS3-201ENST00000503362 CPLX2Q6PUV4 134 aaKnown RBP15.81■□□□□ 0.12
SPCS3-201ENST00000503362 LIMCH1Q9UPQ0 1083 aa15.81■□□□□ 0.12
SPCS3-201ENST00000503362 ERCC6L2Q5T890 1561 aa15.81■□□□□ 0.12
SPCS3-201ENST00000503362 CCDC8Q9H0W5 538 aaPredicted RBP15.8■□□□□ 0.12
SPCS3-201ENST00000503362 PLXNC1O60486 1568 aa15.8■□□□□ 0.12
SPCS3-201ENST00000503362 UHRF1BP1LA0JNW5 1464 aa15.8■□□□□ 0.12
SPCS3-201ENST00000503362 MSH6P52701 1360 aa15.8■□□□□ 0.12
SPCS3-201ENST00000503362 UNC13BO14795 1591 aa15.8■□□□□ 0.12
SPCS3-201ENST00000503362 ANKRD1Q15327 319 aa15.8■□□□□ 0.12
SPCS3-201ENST00000503362 RHPN1Q8TCX5 695 aa15.8■□□□□ 0.12
SPCS3-201ENST00000503362 TNMDQ9H2S6 317 aa15.8■□□□□ 0.12
SPCS3-201ENST00000503362 POLR1AO95602 1720 aaPredicted RBP15.8■□□□□ 0.12
SPCS3-201ENST00000503362 TRDNQ13061 729 aa15.8■□□□□ 0.12
SPCS3-201ENST00000503362 ZC3H6P61129 1189 aaKnown RBP15.79■□□□□ 0.12
SPCS3-201ENST00000503362 ATP8B2P98198 1209 aa15.79■□□□□ 0.12
SPCS3-201ENST00000503362 RRP9O43818 475 aaKnown RBP15.79■□□□□ 0.12
SPCS3-201ENST00000503362 USP25Q9UHP3 1055 aa15.79■□□□□ 0.12
SPCS3-201ENST00000503362 CDC42BPBQ9Y5S2 1711 aa15.79■□□□□ 0.12
SPCS3-201ENST00000503362 PRIM1P49642 420 aaKnown RBP15.78■□□□□ 0.12
SPCS3-201ENST00000503362 RALYLQ86SE5 291 aaKnown RBP15.78■□□□□ 0.12
SPCS3-201ENST00000503362 MAP7D2Q96T17 732 aa15.78■□□□□ 0.12
SPCS3-201ENST00000503362 ANTXR1Q9H6X2 564 aa15.78■□□□□ 0.12
SPCS3-201ENST00000503362 PHF8Q9UPP1 1060 aa15.78■□□□□ 0.12
SPCS3-201ENST00000503362 POGZQ7Z3K3 1410 aa15.78■□□□□ 0.12
SPCS3-201ENST00000503362 TATP17735 454 aaPredicted RBP15.78■□□□□ 0.12
SPCS3-201ENST00000503362 EVA1CP58658 441 aa15.78■□□□□ 0.12
SPCS3-201ENST00000503362 SPATA32Q96LK8 384 aa15.78■□□□□ 0.12
SPCS3-201ENST00000503362 CHL1O00533 1208 aa15.78■□□□□ 0.12
SPCS3-201ENST00000503362 ATF3P18847 181 aa15.78■□□□□ 0.12
SPCS3-201ENST00000503362 ZMYM3Q14202 1370 aa15.78■□□□□ 0.12
SPCS3-201ENST00000503362 SYNE3Q6ZMZ3 975 aa15.78■□□□□ 0.12
SPCS3-201ENST00000503362 PROSER2Q86WR7 435 aaPredicted RBP15.78■□□□□ 0.12
SPCS3-201ENST00000503362 EYA1Q99502 592 aa15.78■□□□□ 0.12
SPCS3-201ENST00000503362 PIK3R4Q99570 1358 aa15.78■□□□□ 0.12
SPCS3-201ENST00000503362 DBF4Q9UBU7 674 aaPredicted RBP15.78■□□□□ 0.12
SPCS3-201ENST00000503362 HMGN5P82970 282 aaKnown RBP15.77■□□□□ 0.12
SPCS3-201ENST00000503362 CLTCL1P53675 1640 aa15.77■□□□□ 0.12
SPCS3-201ENST00000503362 MAP3K19Q56UN5 1328 aa15.77■□□□□ 0.12
SPCS3-201ENST00000503362 KINO60870 393 aaKnown RBP15.77■□□□□ 0.12
SPCS3-201ENST00000503362 CAMK4Q16566 473 aa15.77■□□□□ 0.12
SPCS3-201ENST00000503362 CCDC183Q5T5S1 534 aa15.77■□□□□ 0.12
SPCS3-201ENST00000503362 CREBRFQ8IUR6 639 aa15.77■□□□□ 0.12
SPCS3-201ENST00000503362 CCDC34Q96HJ3 373 aa15.77■□□□□ 0.12
SPCS3-201ENST00000503362 NUP62CLQ9H1M0 184 aa15.77■□□□□ 0.12
SPCS3-201ENST00000503362 ECHDC1Q9NTX5 307 aa15.77■□□□□ 0.12
SPCS3-201ENST00000503362 TPM3P06753 285 aa15.77■□□□□ 0.11
SPCS3-201ENST00000503362 TNRQ92752 1358 aa15.77■□□□□ 0.11
SPCS3-201ENST00000503362 STX6O43752 255 aa15.77■□□□□ 0.11
SPCS3-201ENST00000503362 DDX11Q96FC9 970 aa15.77■□□□□ 0.11
SPCS3-201ENST00000503362 LRSAM1Q6UWE0 723 aa15.76■□□□□ 0.11
SPCS3-201ENST00000503362 KCNH5Q8NCM2 988 aa15.76■□□□□ 0.11
SPCS3-201ENST00000503362 ZFYVE16Q7Z3T8 1539 aa15.76■□□□□ 0.11
SPCS3-201ENST00000503362 EDC4Q6P2E9 1401 aaKnown RBP15.76■□□□□ 0.11
SPCS3-201ENST00000503362 GSPT1P15170 499 aaKnown RBP15.76■□□□□ 0.11
SPCS3-201ENST00000503362 ABCC4O15439 1325 aa15.76■□□□□ 0.11
SPCS3-201ENST00000503362 CHPF2Q9P2E5 772 aa15.76■□□□□ 0.11
SPCS3-201ENST00000503362 KDM4AO75164 1064 aa15.75■□□□□ 0.11
SPCS3-201ENST00000503362 TRIM29Q14134 588 aa15.75■□□□□ 0.11
SPCS3-201ENST00000503362 ANKLE2Q86XL3 938 aa15.75■□□□□ 0.11
SPCS3-201ENST00000503362 MAP3K2Q9Y2U5 619 aa15.75■□□□□ 0.11
SPCS3-201ENST00000503362 FMNL2Q96PY5 1086 aa15.75■□□□□ 0.11
SPCS3-201ENST00000503362 MTERF4Q7Z6M4 381 aaKnown RBP15.75■□□□□ 0.11
SPCS3-201ENST00000503362 ZCCHC11Q5TAX3 1644 aaKnown RBP15.75■□□□□ 0.11
SPCS3-201ENST00000503362 ANAPC15P60006 121 aa15.75■□□□□ 0.11
SPCS3-201ENST00000503362 TTC21AQ8NDW8 1320 aa15.74■□□□□ 0.11
SPCS3-201ENST00000503362 NFXL1Q6ZNB6 911 aa15.74■□□□□ 0.11
SPCS3-201ENST00000503362 SH2B1Q9NRF2 756 aaPredicted RBP15.74■□□□□ 0.11
SPCS3-201ENST00000503362 CHMLP26374 656 aa15.74■□□□□ 0.11
SPCS3-201ENST00000503362 GJB2P29033 226 aa15.74■□□□□ 0.11
SPCS3-201ENST00000503362 PHF23Q9BUL5 403 aaPredicted RBP15.74■□□□□ 0.11
SPCS3-201ENST00000503362 KIF1BO60333 1816 aa15.74■□□□□ 0.11
SPCS3-201ENST00000503362 FLT4P35916 1363 aa15.74■□□□□ 0.11
SPCS3-201ENST00000503362 TPD52L1Q16890 204 aaPredicted RBP15.73■□□□□ 0.11
SPCS3-201ENST00000503362 HOMER1Q86YM7 354 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms