RNA–Protein interactions for RNA: ENST00000502850.5

NUP54-202, Transcript of nucleoporin 54, humanhuman

TSL 1 (best)

Gene NUP54, Length 1,604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-202ENST00000502850 TBC1D2Q9BYX2 928 aa14.91□□□□□ -0.02
NUP54-202ENST00000502850 SLIT3O75094 1523 aa14.9□□□□□ -0.02
NUP54-202ENST00000502850 ORAI2Q96SN7 254 aa14.9□□□□□ -0.02
NUP54-202ENST00000502850 NUTM2BA6NNL0 878 aaPredicted RBP14.89□□□□□ -0.03
NUP54-202ENST00000502850 NUTM2EB1AL46 878 aaPredicted RBP14.89□□□□□ -0.03
NUP54-202ENST00000502850 FOXO3O43524 673 aa14.89□□□□□ -0.03
NUP54-202ENST00000502850 CDC45O75419 566 aa14.89□□□□□ -0.03
NUP54-202ENST00000502850 PSME1Q06323 249 aa14.89□□□□□ -0.03
NUP54-202ENST00000502850 KRT24Q2M2I5 525 aa14.89□□□□□ -0.03
NUP54-202ENST00000502850 CEP85Q6P2H3 762 aa14.89□□□□□ -0.03
NUP54-202ENST00000502850 NUTM2AQ8IVF1 878 aaPredicted RBP14.89□□□□□ -0.03
NUP54-202ENST00000502850 OVOS2A0A0G2JMS6 1433 aa14.89□□□□□ -0.03
NUP54-202ENST00000502850 NCAPD2Q15021 1401 aa14.89□□□□□ -0.03
NUP54-202ENST00000502850 KDM3BQ7LBC6 1761 aa14.88□□□□□ -0.03
NUP54-202ENST00000502850 TAF7Q15545 349 aaPredicted RBP14.88□□□□□ -0.03
NUP54-202ENST00000502850 CAMTA1Q9Y6Y1 1673 aa14.88□□□□□ -0.03
NUP54-202ENST00000502850 SNX21Q969T3 373 aa14.88□□□□□ -0.03
NUP54-202ENST00000502850 TRPM3Q9HCF6 1732 aaPredicted RBP14.87□□□□□ -0.03
NUP54-202ENST00000502850 GNAI3P08754 354 aa14.87□□□□□ -0.03
NUP54-202ENST00000502850 HOXB7P09629 217 aa14.87□□□□□ -0.03
NUP54-202ENST00000502850 NUTM2GQ5VZR2 741 aa14.87□□□□□ -0.03
NUP54-202ENST00000502850 GSE1Q14687 1217 aa14.86□□□□□ -0.03
NUP54-202ENST00000502850 ESCO1Q5FWF5 840 aa14.86□□□□□ -0.03
NUP54-202ENST00000502850 ZNF772Q68DY9 489 aaPredicted RBP14.86□□□□□ -0.03
NUP54-202ENST00000502850 CASC1Q6TDU7 716 aa14.86□□□□□ -0.03
NUP54-202ENST00000502850 ANTXR1Q9H6X2 564 aa14.86□□□□□ -0.03
NUP54-202ENST00000502850 CEMIPQ8WUJ3 1361 aa14.86□□□□□ -0.03
NUP54-202ENST00000502850 GNAI2P04899 355 aa14.85□□□□□ -0.03
NUP54-202ENST00000502850 FLIIQ13045 1269 aa14.84□□□□□ -0.03
NUP54-202ENST00000502850 AMOTQ4VCS5 1084 aa14.84□□□□□ -0.03
NUP54-202ENST00000502850 TTC22Q5TAA0 569 aa14.84□□□□□ -0.03
NUP54-202ENST00000502850 TBC1D9Q6ZT07 1266 aa14.84□□□□□ -0.03
NUP54-202ENST00000502850 PLEKHM2Q8IWE5 1019 aa14.84□□□□□ -0.03
NUP54-202ENST00000502850 MEIS3Q99687 375 aa14.84□□□□□ -0.03
NUP54-202ENST00000502850 MIS18AQ9NYP9 233 aa14.84□□□□□ -0.03
NUP54-202ENST00000502850 SOS2Q07890 1332 aaPredicted RBP14.84□□□□□ -0.03
NUP54-202ENST00000502850 LTV1Q96GA3 475 aaPredicted RBP14.84□□□□□ -0.03
NUP54-202ENST00000502850 SLKQ9H2G2 1235 aaPredicted RBP14.84□□□□□ -0.03
NUP54-202ENST00000502850 CHMP5Q9NZZ3 219 aa14.84□□□□□ -0.03
NUP54-202ENST00000502850 FRAT2O75474 233 aaPredicted RBP14.83□□□□□ -0.04
NUP54-202ENST00000502850 FKBP5Q13451 457 aaPredicted RBP14.83□□□□□ -0.04
NUP54-202ENST00000502850 IL17REQ8NFR9 667 aa14.83□□□□□ -0.04
NUP54-202ENST00000502850 RGPD2P0DJD1 1756 aa14.82□□□□□ -0.04
NUP54-202ENST00000502850 PLEKHO1Q53GL0 409 aaPredicted RBP14.82□□□□□ -0.04
NUP54-202ENST00000502850 SLC4A10Q6U841 1118 aa14.82□□□□□ -0.04
NUP54-202ENST00000502850 AKAP4Q5JQC9 854 aa14.81□□□□□ -0.04
NUP54-202ENST00000502850 NPHP3Q7Z494 1330 aa14.81□□□□□ -0.04
NUP54-202ENST00000502850 ABCC6O95255 1503 aa14.81□□□□□ -0.04
NUP54-202ENST00000502850 AFF2P51816 1311 aa14.81□□□□□ -0.04
NUP54-202ENST00000502850 G2E3Q7L622 706 aa14.81□□□□□ -0.04
NUP54-202ENST00000502850 ALS2Q96Q42 1657 aa14.81□□□□□ -0.04
NUP54-202ENST00000502850 PLEKHG2Q9H7P9 1386 aa14.81□□□□□ -0.04
NUP54-202ENST00000502850 CIZ1Q9ULV3 898 aaPredicted RBP14.81□□□□□ -0.04
NUP54-202ENST00000502850 GSPT1P15170 499 aaKnown RBP14.8□□□□□ -0.04
NUP54-202ENST00000502850 HDGFL1Q5TGJ6 251 aa14.8□□□□□ -0.04
NUP54-202ENST00000502850 OSBPL3Q9H4L5 887 aa14.8□□□□□ -0.04
NUP54-202ENST00000502850 C8orf37Q96NL8 207 aa14.79□□□□□ -0.04
NUP54-202ENST00000502850 ADAMTS2O95450 1211 aa14.78□□□□□ -0.04
NUP54-202ENST00000502850 HSP90AB1P08238 724 aaKnown RBP14.78□□□□□ -0.04
NUP54-202ENST00000502850 RXRBP28702 533 aa14.78□□□□□ -0.04
NUP54-202ENST00000502850 TEFQ10587 303 aa14.78□□□□□ -0.04
NUP54-202ENST00000502850 NBPF6Q5VWK0 638 aa14.78□□□□□ -0.04
NUP54-202ENST00000502850 ARHGEF25Q86VW2 580 aa14.78□□□□□ -0.04
NUP54-202ENST00000502850 NBPF4Q96M43 638 aa14.78□□□□□ -0.04
NUP54-202ENST00000502850 ADAMTS7Q9UKP4 1686 aa14.78□□□□□ -0.04
NUP54-202ENST00000502850 SIPA1L3O60292 1781 aaPredicted RBP14.78□□□□□ -0.04
NUP54-202ENST00000502850 F6X3S4 739 aa14.77□□□□□ -0.04
NUP54-202ENST00000502850 REC8O95072 547 aa14.77□□□□□ -0.04
NUP54-202ENST00000502850 GCP02774 474 aa14.77□□□□□ -0.04
NUP54-202ENST00000502850 XPCQ01831 940 aaPredicted RBP14.77□□□□□ -0.04
NUP54-202ENST00000502850 RABEP1Q15276 862 aa14.77□□□□□ -0.04
NUP54-202ENST00000502850 C1orf141Q5JVX7 400 aa14.77□□□□□ -0.04
NUP54-202ENST00000502850 USHBP1Q8N6Y0 703 aa14.77□□□□□ -0.04
NUP54-202ENST00000502850 NGLY1Q96IV0 654 aa14.77□□□□□ -0.04
NUP54-202ENST00000502850 TUBGCP6Q96RT7 1819 aa14.77□□□□□ -0.04
NUP54-202ENST00000502850 PTMSP20962 102 aa14.77□□□□□ -0.05
NUP54-202ENST00000502850 ZNF530Q6P9A1 599 aaPredicted RBP14.77□□□□□ -0.05
NUP54-202ENST00000502850 SRCIN1Q9C0H9 1055 aa14.77□□□□□ -0.05
NUP54-202ENST00000502850 PXDNQ92626 1479 aa14.77□□□□□ -0.05
NUP54-202ENST00000502850 AOX1Q06278 1338 aa14.76□□□□□ -0.05
NUP54-202ENST00000502850 UBTFL1P0CB47 393 aaPredicted RBP14.76□□□□□ -0.05
NUP54-202ENST00000502850 EIF4A1P60842 406 aaKnown RBP14.76□□□□□ -0.05
NUP54-202ENST00000502850 ATP8B2P98198 1209 aa14.76□□□□□ -0.05
NUP54-202ENST00000502850 LRRCC1Q9C099 1032 aa14.76□□□□□ -0.05
NUP54-202ENST00000502850 BCL11AQ9H165 835 aa14.76□□□□□ -0.05
NUP54-202ENST00000502850 HDAC5Q9UQL6 1122 aa14.76□□□□□ -0.05
NUP54-202ENST00000502850 COL22A1Q8NFW1 1626 aaPredicted RBP14.76□□□□□ -0.05
NUP54-202ENST00000502850 DDX11L8A8MPP1 907 aa14.75□□□□□ -0.05
NUP54-202ENST00000502850 QTRT2Q9H974 415 aaKnown RBP14.75□□□□□ -0.05
NUP54-202ENST00000502850 IBTKQ9P2D0 1353 aaPredicted RBP14.75□□□□□ -0.05
NUP54-202ENST00000502850 K7ELQ4 463 aaPredicted RBP14.74□□□□□ -0.05
NUP54-202ENST00000502850 SDSP20132 328 aa14.74□□□□□ -0.05
NUP54-202ENST00000502850 KRT28Q7Z3Y7 464 aa14.74□□□□□ -0.05
NUP54-202ENST00000502850 ANKRD24Q8TF21 1146 aa14.74□□□□□ -0.05
NUP54-202ENST00000502850 ZBTB7CA1YPR0 619 aa14.74□□□□□ -0.05
NUP54-202ENST00000502850 BTBD11A6QL63 1104 aa14.74□□□□□ -0.05
NUP54-202ENST00000502850 RAB11FIP3O75154 756 aa14.74□□□□□ -0.05
NUP54-202ENST00000502850 HSP90AA1P07900 732 aaKnown RBP14.74□□□□□ -0.05
NUP54-202ENST00000502850 IL27Q8NEV9 243 aa14.74□□□□□ -0.05
NUP54-202ENST00000502850 KIF2CQ99661 725 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms