RNA–Protein interactions for RNA: ENST00000502816.1

TRIO-204, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 736 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-204ENST00000502816 COL23A1Q86Y22 540 aaPredicted RBP33.38■■■□□ 2.93
TRIO-204ENST00000502816 FLAD1Q8NFF5 587 aa33.38■■■□□ 2.93
TRIO-204ENST00000502816 CFAP53Q96M91 514 aa33.38■■■□□ 2.93
TRIO-204ENST00000502816 MTHFSDQ2M296 383 aaKnown RBP33.36■■■□□ 2.93
TRIO-204ENST00000502816 ITPK1Q13572 414 aa33.35■■■□□ 2.93
TRIO-204ENST00000502816 NFATC2IPQ8NCF5 419 aa33.35■■■□□ 2.93
TRIO-204ENST00000502816 MRC1P22897 1456 aa33.34■■■□□ 2.93
TRIO-204ENST00000502816 U2SURPO15042 1029 aaKnown RBP33.34■■■□□ 2.93
TRIO-204ENST00000502816 ATP6V1AP38606 617 aa33.34■■■□□ 2.93
TRIO-204ENST00000502816 LINC00116Q8NCU8 138 aa33.34■■■□□ 2.93
TRIO-204ENST00000502816 SLC4A9Q96Q91 983 aa33.33■■■□□ 2.93
TRIO-204ENST00000502816 ARXQ96QS3 562 aa33.32■■■□□ 2.92
TRIO-204ENST00000502816 MAP3K5Q99683 1374 aa33.32■■■□□ 2.92
TRIO-204ENST00000502816 COL5A3P25940 1745 aaPredicted RBP33.31■■■□□ 2.92
TRIO-204ENST00000502816 RNMTO43148 476 aaKnown RBP33.31■■■□□ 2.92
TRIO-204ENST00000502816 LGR6Q9HBX8 967 aa33.31■■■□□ 2.92
TRIO-204ENST00000502816 CICQ96RK0 1608 aaPredicted RBP33.31■■■□□ 2.92
TRIO-204ENST00000502816 AK7Q96M32 723 aa33.3■■■□□ 2.92
TRIO-204ENST00000502816 NUDCQ9Y266 331 aa33.3■■■□□ 2.92
TRIO-204ENST00000502816 SLC52A2Q9HAB3 445 aa33.29■■■□□ 2.92
TRIO-204ENST00000502816 SSFA2P28290 1259 aa33.28■■■□□ 2.92
TRIO-204ENST00000502816 AMIGO3Q86WK7 504 aa33.28■■■□□ 2.92
TRIO-204ENST00000502816 SYT17Q9BSW7 474 aa33.28■■■□□ 2.92
TRIO-204ENST00000502816 FHDC1Q9C0D6 1143 aaPredicted RBP33.27■■■□□ 2.92
TRIO-204ENST00000502816 RSPH6AQ9H0K4 717 aa33.27■■■□□ 2.92
TRIO-204ENST00000502816 POLD1P28340 1107 aa33.26■■■□□ 2.91
TRIO-204ENST00000502816 RC3H1Q5TC82 1133 aaKnown RBP33.26■■■□□ 2.91
TRIO-204ENST00000502816 GAS2L2Q8NHY3 880 aa33.25■■■□□ 2.91
TRIO-204ENST00000502816 RBM42Q9BTD8 480 aaKnown RBP33.25■■■□□ 2.91
TRIO-204ENST00000502816 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.23■■■□□ 2.91
TRIO-204ENST00000502816 MSH5O43196 834 aa33.22■■■□□ 2.91
TRIO-204ENST00000502816 FCHSD2O94868 740 aa33.22■■■□□ 2.91
TRIO-204ENST00000502816 CNTNAP4Q9C0A0 1308 aa33.22■■■□□ 2.91
TRIO-204ENST00000502816 PHACTR3Q96KR7 559 aa33.21■■■□□ 2.91
TRIO-204ENST00000502816 TJP1Q07157 1748 aa33.2■■■□□ 2.91
TRIO-204ENST00000502816 MYH14Q7Z406 1995 aaKnown RBP33.2■■■□□ 2.91
TRIO-204ENST00000502816 PRKAR2BP31323 418 aa33.2■■■□□ 2.91
TRIO-204ENST00000502816 GNAT3A8MTJ3 354 aa33.19■■■□□ 2.9
TRIO-204ENST00000502816 GNPATO15228 680 aa33.19■■■□□ 2.9
TRIO-204ENST00000502816 SIPA1L3O60292 1781 aaPredicted RBP33.19■■■□□ 2.9
TRIO-204ENST00000502816 PTCD1O75127 700 aaKnown RBP33.18■■■□□ 2.9
TRIO-204ENST00000502816 U2AF1L5P0DN76 240 aaPredicted RBP33.18■■■□□ 2.9
TRIO-204ENST00000502816 U2AF1Q01081 240 aaKnown RBP eCLIP33.18■■■□□ 2.9
TRIO-204ENST00000502816 RALBP1Q15311 655 aa33.17■■■□□ 2.9
TRIO-204ENST00000502816 IL17REQ8NFR9 667 aa33.17■■■□□ 2.9
TRIO-204ENST00000502816 DDX10Q13206 875 aaKnown RBP33.16■■■□□ 2.9
TRIO-204ENST00000502816 SMIM5Q71RC9 77 aa33.16■■■□□ 2.9
TRIO-204ENST00000502816 UBR2Q8IWV8 1755 aa33.16■■■□□ 2.9
TRIO-204ENST00000502816 PHF14O94880 888 aa33.15■■■□□ 2.9
TRIO-204ENST00000502816 KCPQ6ZWJ8 1503 aa33.15■■■□□ 2.9
TRIO-204ENST00000502816 CEMIPQ8WUJ3 1361 aa33.15■■■□□ 2.9
TRIO-204ENST00000502816 ADRA2BP18089 450 aa33.14■■■□□ 2.9
TRIO-204ENST00000502816 RTCBQ9Y3I0 505 aaKnown RBP33.14■■■□□ 2.9
TRIO-204ENST00000502816 RPS6KA4O75676 772 aa33.13■■■□□ 2.89
TRIO-204ENST00000502816 ZEB1P37275 1124 aaPredicted RBP33.13■■■□□ 2.89
TRIO-204ENST00000502816 MSL1Q68DK7 614 aa33.12■■■□□ 2.89
TRIO-204ENST00000502816 DCAF8L1A6NGE4 600 aa33.11■■■□□ 2.89
TRIO-204ENST00000502816 SLC39A6Q13433 755 aa33.11■■■□□ 2.89
TRIO-204ENST00000502816 TRAPPC3LQ5T215 181 aa33.11■■■□□ 2.89
TRIO-204ENST00000502816 VSIG10Q8N0Z9 540 aa33.1■■■□□ 2.89
TRIO-204ENST00000502816 CRKLP46109 303 aaKnown RBP33.08■■■□□ 2.89
TRIO-204ENST00000502816 TEFQ10587 303 aa33.07■■■□□ 2.88
TRIO-204ENST00000502816 ARHGEF1Q92888 912 aaKnown RBP33.07■■■□□ 2.88
TRIO-204ENST00000502816 C4AP0C0L4 1744 aa33.06■■■□□ 2.88
TRIO-204ENST00000502816 INTS5Q6P9B9 1019 aaKnown RBP33.06■■■□□ 2.88
TRIO-204ENST00000502816 HTATSF1O43719 755 aaKnown RBP33.05■■■□□ 2.88
TRIO-204ENST00000502816 DNAJC10Q8IXB1 793 aa33.05■■■□□ 2.88
TRIO-204ENST00000502816 PLEKHF1Q96S99 279 aa33.04■■■□□ 2.88
TRIO-204ENST00000502816 CD2APQ9Y5K6 639 aa33.04■■■□□ 2.88
TRIO-204ENST00000502816 UTRNP46939 3433 aa33.04■■■□□ 2.88
TRIO-204ENST00000502816 CYP19A1P11511 503 aaPredicted RBP33.03■■■□□ 2.88
TRIO-204ENST00000502816 ZNF790Q6PG37 636 aa33.03■■■□□ 2.88
TRIO-204ENST00000502816 TTC5Q8N0Z6 440 aa33■■■□□ 2.87
TRIO-204ENST00000502816 NLGN1Q8N2Q7 840 aa33■■■□□ 2.87
TRIO-204ENST00000502816 CCDC87Q9NVE4 849 aa33■■■□□ 2.87
TRIO-204ENST00000502816 MYBBP1AQ9BQG0 1328 aaKnown RBP33■■■□□ 2.87
TRIO-204ENST00000502816 DLG5Q8TDM6 1919 aa32.99■■■□□ 2.87
TRIO-204ENST00000502816 GYS1P13807 737 aa32.99■■■□□ 2.87
TRIO-204ENST00000502816 RFC4P35249 363 aa32.99■■■□□ 2.87
TRIO-204ENST00000502816 NLGN2Q8NFZ4 835 aa32.99■■■□□ 2.87
TRIO-204ENST00000502816 PNNQ9H307 717 aaKnown RBP32.98■■■□□ 2.87
TRIO-204ENST00000502816 KLHL34Q8N239 644 aa32.97■■■□□ 2.87
TRIO-204ENST00000502816 RTF1Q92541 710 aaKnown RBP32.97■■■□□ 2.87
TRIO-204ENST00000502816 ZNF496Q96IT1 587 aaPredicted RBP32.97■■■□□ 2.87
TRIO-204ENST00000502816 HEG1Q9ULI3 1381 aa32.96■■■□□ 2.87
TRIO-204ENST00000502816 SOS1Q07889 1333 aaPredicted RBP32.96■■■□□ 2.87
TRIO-204ENST00000502816 TEX13AQ9BXU3 409 aaPredicted RBP32.95■■■□□ 2.87
TRIO-204ENST00000502816 GOLGB1Q14789 3259 aaKnown RBP32.95■■■□□ 2.86
TRIO-204ENST00000502816 KIF13BQ9NQT8 1826 aa32.94■■■□□ 2.86
TRIO-204ENST00000502816 BTBD11A6QL63 1104 aa32.94■■■□□ 2.86
TRIO-204ENST00000502816 MCM10Q7L590 875 aa32.94■■■□□ 2.86
TRIO-204ENST00000502816 USP42Q9H9J4 1324 aaKnown RBP32.94■■■□□ 2.86
TRIO-204ENST00000502816 NEFMP07197 916 aa32.93■■■□□ 2.86
TRIO-204ENST00000502816 MMP10P09238 476 aa32.93■■■□□ 2.86
TRIO-204ENST00000502816 FMNL2Q96PY5 1086 aa32.92■■■□□ 2.86
TRIO-204ENST00000502816 CHD4Q14839 1912 aa32.91■■■□□ 2.86
TRIO-204ENST00000502816 STARD3NLO95772 234 aa32.91■■■□□ 2.86
TRIO-204ENST00000502816 PRKRIP1Q9H875 184 aaPredicted RBP32.9■■■□□ 2.86
TRIO-204ENST00000502816 ZBTB1Q9Y2K1 713 aa32.9■■■□□ 2.86
TRIO-204ENST00000502816 KCNQ3O43525 872 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms