RNA–Protein interactions for RNA: ENST00000500401.2

SPCS2P3-201, Transcript of signal peptidase complex subunit 2 pseudogene 3, humanhuman

BASIC

Gene SPCS2P3, Length 656 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS2P3-201ENST00000500401 ZBTB7AO95365 584 aa32.35■■■□□ 2.77
SPCS2P3-201ENST00000500401 SLC4A9Q96Q91 983 aa32.35■■■□□ 2.77
SPCS2P3-201ENST00000500401 MRC1P22897 1456 aa32.35■■■□□ 2.77
SPCS2P3-201ENST00000500401 PNPLA7Q6ZV29 1317 aa32.34■■■□□ 2.77
SPCS2P3-201ENST00000500401 C4BP0C0L5 1744 aa32.34■■■□□ 2.77
SPCS2P3-201ENST00000500401 ZNF316A6NFI3 1004 aaPredicted RBP32.33■■■□□ 2.77
SPCS2P3-201ENST00000500401 ITPK1Q13572 414 aa32.33■■■□□ 2.77
SPCS2P3-201ENST00000500401 SLC52A2Q9HAB3 445 aa32.32■■■□□ 2.76
SPCS2P3-201ENST00000500401 MYBBP1AQ9BQG0 1328 aaKnown RBP32.31■■■□□ 2.76
SPCS2P3-201ENST00000500401 FCHSD2O94868 740 aa32.31■■■□□ 2.76
SPCS2P3-201ENST00000500401 LINC00116Q8NCU8 138 aa32.31■■■□□ 2.76
SPCS2P3-201ENST00000500401 GAS2L2Q8NHY3 880 aa32.31■■■□□ 2.76
SPCS2P3-201ENST00000500401 TFCP2L1Q9NZI6 479 aa32.31■■■□□ 2.76
SPCS2P3-201ENST00000500401 MAP3K5Q99683 1374 aa32.31■■■□□ 2.76
SPCS2P3-201ENST00000500401 AMIGO3Q86WK7 504 aa32.3■■■□□ 2.76
SPCS2P3-201ENST00000500401 PRKRIP1Q9H875 184 aaPredicted RBP32.3■■■□□ 2.76
SPCS2P3-201ENST00000500401 SPON1Q9HCB6 807 aa32.3■■■□□ 2.76
SPCS2P3-201ENST00000500401 ATF5Q9Y2D1 282 aaPredicted RBP32.3■■■□□ 2.76
SPCS2P3-201ENST00000500401 IL17REQ8NFR9 667 aa32.29■■■□□ 2.76
SPCS2P3-201ENST00000500401 ATP6V1AP38606 617 aa32.28■■■□□ 2.76
SPCS2P3-201ENST00000500401 SMIM5Q71RC9 77 aa32.28■■■□□ 2.76
SPCS2P3-201ENST00000500401 RBM42Q9BTD8 480 aaKnown RBP32.27■■■□□ 2.76
SPCS2P3-201ENST00000500401 GNAT3A8MTJ3 354 aa32.26■■■□□ 2.75
SPCS2P3-201ENST00000500401 ZNF831Q5JPB2 1677 aa32.26■■■□□ 2.75
SPCS2P3-201ENST00000500401 UBR3Q6ZT12 1888 aa32.26■■■□□ 2.75
SPCS2P3-201ENST00000500401 PTGER2P43116 358 aa32.25■■■□□ 2.75
SPCS2P3-201ENST00000500401 SIPA1L3O60292 1781 aaPredicted RBP32.24■■■□□ 2.75
SPCS2P3-201ENST00000500401 COL5A3P25940 1745 aaPredicted RBP32.24■■■□□ 2.75
SPCS2P3-201ENST00000500401 PTCD1O75127 700 aaKnown RBP32.24■■■□□ 2.75
SPCS2P3-201ENST00000500401 SLC39A6Q13433 755 aa32.24■■■□□ 2.75
SPCS2P3-201ENST00000500401 COL23A1Q86Y22 540 aaPredicted RBP32.24■■■□□ 2.75
SPCS2P3-201ENST00000500401 PLEKHF1Q96S99 279 aa32.23■■■□□ 2.75
SPCS2P3-201ENST00000500401 MTFR1LQ9H019 292 aa32.23■■■□□ 2.75
SPCS2P3-201ENST00000500401 TJP1Q07157 1748 aa32.22■■■□□ 2.75
SPCS2P3-201ENST00000500401 SGIP1Q9BQI5 828 aa32.21■■■□□ 2.75
SPCS2P3-201ENST00000500401 KCPQ6ZWJ8 1503 aa32.2■■■□□ 2.74
SPCS2P3-201ENST00000500401 DLG5Q8TDM6 1919 aa32.2■■■□□ 2.74
SPCS2P3-201ENST00000500401 CEMIPQ8WUJ3 1361 aa32.19■■■□□ 2.74
SPCS2P3-201ENST00000500401 AK7Q96M32 723 aa32.19■■■□□ 2.74
SPCS2P3-201ENST00000500401 COL24A1Q17RW2 1714 aa32.18■■■□□ 2.74
SPCS2P3-201ENST00000500401 MYH14Q7Z406 1995 aaKnown RBP32.18■■■□□ 2.74
SPCS2P3-201ENST00000500401 PPP1R1BQ9UD71 204 aaPredicted RBP32.18■■■□□ 2.74
SPCS2P3-201ENST00000500401 DCTN1Q14203 1278 aa32.17■■■□□ 2.74
SPCS2P3-201ENST00000500401 CICQ96RK0 1608 aaPredicted RBP32.17■■■□□ 2.74
SPCS2P3-201ENST00000500401 UBR2Q8IWV8 1755 aa32.17■■■□□ 2.74
SPCS2P3-201ENST00000500401 MCM10Q7L590 875 aa32.16■■■□□ 2.74
SPCS2P3-201ENST00000500401 PHF14O94880 888 aa32.15■■■□□ 2.74
SPCS2P3-201ENST00000500401 DCAF8L1A6NGE4 600 aa32.14■■■□□ 2.74
SPCS2P3-201ENST00000500401 MSH5O43196 834 aa32.14■■■□□ 2.74
SPCS2P3-201ENST00000500401 SLC16A10Q8TF71 515 aa32.14■■■□□ 2.74
SPCS2P3-201ENST00000500401 GNPATO15228 680 aa32.13■■■□□ 2.73
SPCS2P3-201ENST00000500401 TEFQ10587 303 aa32.13■■■□□ 2.73
SPCS2P3-201ENST00000500401 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.12■■■□□ 2.73
SPCS2P3-201ENST00000500401 DNAJC10Q8IXB1 793 aa32.11■■■□□ 2.73
SPCS2P3-201ENST00000500401 HMGB2P26583 209 aaKnown RBP32.1■■■□□ 2.73
SPCS2P3-201ENST00000500401 MSL1Q68DK7 614 aa32.1■■■□□ 2.73
SPCS2P3-201ENST00000500401 CNTNAP4Q9C0A0 1308 aa32.09■■■□□ 2.73
SPCS2P3-201ENST00000500401 KCNQ3O43525 872 aa32.09■■■□□ 2.73
SPCS2P3-201ENST00000500401 YY1P25490 414 aa32.09■■■□□ 2.73
SPCS2P3-201ENST00000500401 SSFA2P28290 1259 aa32.08■■■□□ 2.73
SPCS2P3-201ENST00000500401 NFE2L2Q16236 605 aa32.08■■■□□ 2.73
SPCS2P3-201ENST00000500401 CCDC184Q52MB2 194 aa32.08■■■□□ 2.73
SPCS2P3-201ENST00000500401 RC3H1Q5TC82 1133 aaKnown RBP32.07■■■□□ 2.72
SPCS2P3-201ENST00000500401 FLAD1Q8NFF5 587 aa32.07■■■□□ 2.72
SPCS2P3-201ENST00000500401 RTF1Q92541 710 aaKnown RBP32.07■■■□□ 2.72
SPCS2P3-201ENST00000500401 CRKLP46109 303 aaKnown RBP32.06■■■□□ 2.72
SPCS2P3-201ENST00000500401 ZNF790Q6PG37 636 aa32.06■■■□□ 2.72
SPCS2P3-201ENST00000500401 CCDC146Q8IYE0 955 aa32.06■■■□□ 2.72
SPCS2P3-201ENST00000500401 MAPK8IP3Q9UPT6 1336 aa32.05■■■□□ 2.72
SPCS2P3-201ENST00000500401 HTATSF1O43719 755 aaKnown RBP32.05■■■□□ 2.72
SPCS2P3-201ENST00000500401 NEFMP07197 916 aa32.05■■■□□ 2.72
SPCS2P3-201ENST00000500401 ZNF496Q96IT1 587 aaPredicted RBP32.05■■■□□ 2.72
SPCS2P3-201ENST00000500401 ADAMTS8Q9UP79 889 aa32.05■■■□□ 2.72
SPCS2P3-201ENST00000500401 THUMPD2Q9BTF0 503 aaKnown RBP32.04■■■□□ 2.72
SPCS2P3-201ENST00000500401 INTS5Q6P9B9 1019 aaKnown RBP32.03■■■□□ 2.72
SPCS2P3-201ENST00000500401 TTC5Q8N0Z6 440 aa32.03■■■□□ 2.72
SPCS2P3-201ENST00000500401 ARXQ96QS3 562 aa32.03■■■□□ 2.72
SPCS2P3-201ENST00000500401 PNNQ9H307 717 aaKnown RBP32.03■■■□□ 2.72
SPCS2P3-201ENST00000500401 RTCBQ9Y3I0 505 aaKnown RBP32.03■■■□□ 2.72
SPCS2P3-201ENST00000500401 C4AP0C0L4 1744 aa32.03■■■□□ 2.72
SPCS2P3-201ENST00000500401 BTBD11A6QL63 1104 aa32.02■■■□□ 2.72
SPCS2P3-201ENST00000500401 RPS6KA4O75676 772 aa32.02■■■□□ 2.72
SPCS2P3-201ENST00000500401 CYP19A1P11511 503 aaPredicted RBP32.01■■■□□ 2.71
SPCS2P3-201ENST00000500401 WDR43Q15061 677 aaKnown RBP eCLIP32.01■■■□□ 2.71
SPCS2P3-201ENST00000500401 FHDC1Q9C0D6 1143 aaPredicted RBP32.01■■■□□ 2.71
SPCS2P3-201ENST00000500401 HEG1Q9ULI3 1381 aa32■■■□□ 2.71
SPCS2P3-201ENST00000500401 VSIG10Q8N0Z9 540 aa31.99■■■□□ 2.71
SPCS2P3-201ENST00000500401 ARHGEF1Q92888 912 aaKnown RBP31.99■■■□□ 2.71
SPCS2P3-201ENST00000500401 TRAPPC3LQ5T215 181 aa31.98■■■□□ 2.71
SPCS2P3-201ENST00000500401 MIS18AQ9NYP9 233 aa31.98■■■□□ 2.71
SPCS2P3-201ENST00000500401 RRP7AQ9Y3A4 280 aaKnown RBP31.98■■■□□ 2.71
SPCS2P3-201ENST00000500401 POLD1P28340 1107 aa31.97■■■□□ 2.71
SPCS2P3-201ENST00000500401 TMPOP42166 694 aaKnown RBP31.97■■■□□ 2.71
SPCS2P3-201ENST00000500401 CCDC87Q9NVE4 849 aa31.96■■■□□ 2.71
SPCS2P3-201ENST00000500401 ZBTB1Q9Y2K1 713 aa31.96■■■□□ 2.71
SPCS2P3-201ENST00000500401 RIPK4P57078 832 aa31.95■■■□□ 2.71
SPCS2P3-201ENST00000500401 SYT17Q9BSW7 474 aa31.95■■■□□ 2.71
SPCS2P3-201ENST00000500401 KDM3BQ7LBC6 1761 aa31.94■■■□□ 2.7
SPCS2P3-201ENST00000500401 PRAMEF22A3QJZ6 481 aa31.94■■■□□ 2.7
SPCS2P3-201ENST00000500401 TAF7Q15545 349 aaPredicted RBP31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms