RNA–Protein interactions for RNA: ENST00000498528.1

KDM3A-215, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 352 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-215ENST00000498528 KIF13BQ9NQT8 1826 aa8.43□□□□□ -1.06
KDM3A-215ENST00000498528 TMF1P82094 1093 aa8.43□□□□□ -1.06
KDM3A-215ENST00000498528 TRAPPC3LQ5T215 181 aa8.43□□□□□ -1.06
KDM3A-215ENST00000498528 RBM46Q8TBY0 533 aaKnown RBP8.43□□□□□ -1.06
KDM3A-215ENST00000498528 RBM42Q9BTD8 480 aaKnown RBP8.43□□□□□ -1.06
KDM3A-215ENST00000498528 RRAGCQ9HB90 399 aa8.43□□□□□ -1.06
KDM3A-215ENST00000498528 CCDC87Q9NVE4 849 aa8.43□□□□□ -1.06
KDM3A-215ENST00000498528 RNF181Q9P0P0 153 aa8.43□□□□□ -1.06
KDM3A-215ENST00000498528 SPG7Q9UQ90 795 aa8.43□□□□□ -1.06
KDM3A-215ENST00000498528 RTCBQ9Y3I0 505 aaKnown RBP8.43□□□□□ -1.06
KDM3A-215ENST00000498528 KDM2BQ8NHM5 1336 aa8.43□□□□□ -1.06
KDM3A-215ENST00000498528 KCPQ6ZWJ8 1503 aa8.43□□□□□ -1.06
KDM3A-215ENST00000498528 ST20-MTHFSA0A0A6YYL1 179 aa8.42□□□□□ -1.06
KDM3A-215ENST00000498528 FYB1O15117 783 aa8.42□□□□□ -1.06
KDM3A-215ENST00000498528 RFC4P35249 363 aa8.42□□□□□ -1.06
KDM3A-215ENST00000498528 TGFB2P61812 414 aa8.42□□□□□ -1.06
KDM3A-215ENST00000498528 NLGN1Q8N2Q7 840 aa8.42□□□□□ -1.06
KDM3A-215ENST00000498528 PARP3Q9Y6F1 533 aa8.42□□□□□ -1.06
KDM3A-215ENST00000498528 INSRP06213 1382 aa8.42□□□□□ -1.06
KDM3A-215ENST00000498528 FLT4P35916 1363 aa8.42□□□□□ -1.06
KDM3A-215ENST00000498528 C4AP0C0L4 1744 aa8.41□□□□□ -1.06
KDM3A-215ENST00000498528 C10orf71Q711Q0 1435 aa8.41□□□□□ -1.06
KDM3A-215ENST00000498528 TONSLQ96HA7 1378 aa8.41□□□□□ -1.06
KDM3A-215ENST00000498528 PLEKHG2Q9H7P9 1386 aa8.41□□□□□ -1.06
KDM3A-215ENST00000498528 EMILIN1Q9Y6C2 1016 aa8.41□□□□□ -1.06
KDM3A-215ENST00000498528 BRCA1P38398 1863 aaKnown RBP8.4□□□□□ -1.06
KDM3A-215ENST00000498528 ARFGEF1Q9Y6D6 1849 aa8.4□□□□□ -1.06
KDM3A-215ENST00000498528 PRELPP51888 382 aa8.4□□□□□ -1.06
KDM3A-215ENST00000498528 FSTL1Q12841 308 aa8.4□□□□□ -1.06
KDM3A-215ENST00000498528 DALRD3Q5D0E6 543 aaKnown RBP8.4□□□□□ -1.06
KDM3A-215ENST00000498528 ARHGEF1Q92888 912 aaKnown RBP8.4□□□□□ -1.06
KDM3A-215ENST00000498528 PUS7Q96PZ0 661 aaKnown RBP8.4□□□□□ -1.06
KDM3A-215ENST00000498528 ATG3Q9NT62 314 aa8.4□□□□□ -1.06
KDM3A-215ENST00000498528 PIM2Q9P1W9 311 aa8.4□□□□□ -1.06
KDM3A-215ENST00000498528 TNRC6CQ9HCJ0 1690 aaKnown RBP8.4□□□□□ -1.07
KDM3A-215ENST00000498528 HSPA1AP0DMV8 641 aaKnown RBP8.39□□□□□ -1.07
KDM3A-215ENST00000498528 HSPA1BP0DMV9 641 aaKnown RBP8.39□□□□□ -1.07
KDM3A-215ENST00000498528 CHRNA5P30532 468 aa8.39□□□□□ -1.07
KDM3A-215ENST00000498528 IFNL2Q8IZJ0 200 aa8.39□□□□□ -1.07
KDM3A-215ENST00000498528 JMYQ8N9B5 988 aa8.39□□□□□ -1.07
KDM3A-215ENST00000498528 SMC1BQ8NDV3 1235 aa8.39□□□□□ -1.07
KDM3A-215ENST00000498528 TESK2Q96S53 571 aa8.39□□□□□ -1.07
KDM3A-215ENST00000498528 GYS1P13807 737 aa8.38□□□□□ -1.07
KDM3A-215ENST00000498528 PHKG2P15735 406 aa8.38□□□□□ -1.07
KDM3A-215ENST00000498528 NKX1-1Q15270 411 aaPredicted RBP8.38□□□□□ -1.07
KDM3A-215ENST00000498528 SBF1O95248 1867 aa8.38□□□□□ -1.07
KDM3A-215ENST00000498528 PTCD1O75127 700 aaKnown RBP8.37□□□□□ -1.07
KDM3A-215ENST00000498528 KCNA3P22001 575 aa8.37□□□□□ -1.07
KDM3A-215ENST00000498528 TNNT2P45379 298 aaPredicted RBP8.37□□□□□ -1.07
KDM3A-215ENST00000498528 RASSF7Q02833 373 aa8.37□□□□□ -1.07
KDM3A-215ENST00000498528 DCAF5Q96JK2 942 aa8.37□□□□□ -1.07
KDM3A-215ENST00000498528 EYA1Q99502 592 aa8.37□□□□□ -1.07
KDM3A-215ENST00000498528 SRP68Q9UHB9 627 aaKnown RBP8.37□□□□□ -1.07
KDM3A-215ENST00000498528 COL5A3P25940 1745 aaPredicted RBP8.37□□□□□ -1.07
KDM3A-215ENST00000498528 CCDC88AQ3V6T2 1871 aa8.36□□□□□ -1.07
KDM3A-215ENST00000498528 MYH14Q7Z406 1995 aaKnown RBP8.36□□□□□ -1.07
KDM3A-215ENST00000498528 RPS6KA4O75676 772 aa8.36□□□□□ -1.07
KDM3A-215ENST00000498528 ADRA2BP18089 450 aa8.36□□□□□ -1.07
KDM3A-215ENST00000498528 CABP4P57796 275 aa8.36□□□□□ -1.07
KDM3A-215ENST00000498528 SLC4A9Q96Q91 983 aa8.36□□□□□ -1.07
KDM3A-215ENST00000498528 KDRP35968 1356 aa8.35□□□□□ -1.07
KDM3A-215ENST00000498528 KIF24Q5T7B8 1368 aa8.35□□□□□ -1.07
KDM3A-215ENST00000498528 CNTNAP4Q9C0A0 1308 aa8.35□□□□□ -1.07
KDM3A-215ENST00000498528 SLC24A1O60721 1099 aa8.35□□□□□ -1.07
KDM3A-215ENST00000498528 DDR1Q08345 913 aa8.35□□□□□ -1.07
KDM3A-215ENST00000498528 FKBP8Q14318 412 aa8.35□□□□□ -1.07
KDM3A-215ENST00000498528 POLR3GLQ9BT43 218 aa8.35□□□□□ -1.07
KDM3A-215ENST00000498528 TIAM2Q8IVF5 1701 aa8.34□□□□□ -1.07
KDM3A-215ENST00000498528 VEGFAP15692 232 aaPredicted RBP8.34□□□□□ -1.07
KDM3A-215ENST00000498528 CRKLP46109 303 aaKnown RBP8.34□□□□□ -1.07
KDM3A-215ENST00000498528 RC3H1Q5TC82 1133 aaKnown RBP8.34□□□□□ -1.07
KDM3A-215ENST00000498528 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.34□□□□□ -1.075e-12■■□□□ 12
KDM3A-215ENST00000498528 ERVV-2B6SEH9 535 aa8.33□□□□□ -1.08
KDM3A-215ENST00000498528 ZNF530Q6P9A1 599 aaPredicted RBP8.33□□□□□ -1.08
KDM3A-215ENST00000498528 CARD14Q9BXL6 1004 aa8.33□□□□□ -1.08
KDM3A-215ENST00000498528 ZNF219Q9P2Y4 722 aaPredicted RBP8.33□□□□□ -1.08
KDM3A-215ENST00000498528 MKRN1Q9UHC7 482 aaKnown RBP8.33□□□□□ -1.08
KDM3A-215ENST00000498528 ANKRD26Q9UPS8 1709 aa8.33□□□□□ -1.08
KDM3A-215ENST00000498528 WASHC2AQ641Q2 1341 aa8.32□□□□□ -1.08
KDM3A-215ENST00000498528 USP42Q9H9J4 1324 aaKnown RBP8.32□□□□□ -1.08
KDM3A-215ENST00000498528 NCAPD2Q15021 1401 aa8.32□□□□□ -1.08
KDM3A-215ENST00000498528 AFDNP55196 1824 aaKnown RBP8.32□□□□□ -1.08
KDM3A-215ENST00000498528 ZPR1O75312 459 aa8.32□□□□□ -1.08
KDM3A-215ENST00000498528 HSP90AB1P08238 724 aaKnown RBP8.32□□□□□ -1.08
KDM3A-215ENST00000498528 LMNB1P20700 586 aa8.32□□□□□ -1.08
KDM3A-215ENST00000498528 MTHFSP49914 203 aa8.32□□□□□ -1.08
KDM3A-215ENST00000498528 EIF4A2Q14240 407 aaKnown RBP8.32□□□□□ -1.08
KDM3A-215ENST00000498528 PLEKHO1Q53GL0 409 aaPredicted RBP8.32□□□□□ -1.08
KDM3A-215ENST00000498528 CDCA8Q53HL2 280 aa8.32□□□□□ -1.08
KDM3A-215ENST00000498528 C1orf141Q5JVX7 400 aa8.32□□□□□ -1.08
KDM3A-215ENST00000498528 USPL1Q5W0Q7 1092 aa8.32□□□□□ -1.08
KDM3A-215ENST00000498528 ZNF831Q5JPB2 1677 aa8.32□□□□□ -1.08
KDM3A-215ENST00000498528 GLTPD2A6NH11 291 aa8.31□□□□□ -1.08
KDM3A-215ENST00000498528 POLRMTO00411 1230 aaKnown RBP8.31□□□□□ -1.08
KDM3A-215ENST00000498528 NFATC2IPQ8NCF5 419 aa8.31□□□□□ -1.08
KDM3A-215ENST00000498528 POLKQ9UBT6 870 aa8.31□□□□□ -1.08
KDM3A-215ENST00000498528 TJP1Q07157 1748 aa8.31□□□□□ -1.08
KDM3A-215ENST00000498528 KDM6AO15550 1401 aaPredicted RBP8.3□□□□□ -1.08
KDM3A-215ENST00000498528 DPY19L2Q6NUT2 758 aa8.3□□□□□ -1.08
KDM3A-215ENST00000498528 BICDL1Q6ZP65 573 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms