RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 SPATA31C2B4DYI2 1134 aa9.37□□□□□ -0.91
SSR3-209ENST00000498205 TLR1Q15399 786 aa9.37□□□□□ -0.91
SSR3-209ENST00000498205 PBXIP1Q96AQ6 731 aa9.37□□□□□ -0.91
SSR3-209ENST00000498205 ZBTB7BO15156 539 aaPredicted RBP9.36□□□□□ -0.91
SSR3-209ENST00000498205 PPP1R15AO75807 674 aaPredicted RBP9.36□□□□□ -0.91
SSR3-209ENST00000498205 SMTNP53814 917 aa9.36□□□□□ -0.91
SSR3-209ENST00000498205 FIGNL2A6NMB9 653 aa9.35□□□□□ -0.91
SSR3-209ENST00000498205 USP17L15C9J2P7 530 aa9.35□□□□□ -0.91
SSR3-209ENST00000498205 USP17L10C9JJH3 530 aa9.35□□□□□ -0.91
SSR3-209ENST00000498205 USP17L13C9JLJ4 530 aa9.35□□□□□ -0.91
SSR3-209ENST00000498205 USP17L12C9JPN9 530 aa9.35□□□□□ -0.91
SSR3-209ENST00000498205 USP17L11C9JVI0 530 aa9.35□□□□□ -0.91
SSR3-209ENST00000498205 USP17L21D6R901 530 aa9.35□□□□□ -0.91
SSR3-209ENST00000498205 USP17L18D6R9N7 530 aa9.35□□□□□ -0.91
SSR3-209ENST00000498205 USP17L22D6RA61 530 aa9.35□□□□□ -0.91
SSR3-209ENST00000498205 USP17L17D6RBQ6 530 aa9.35□□□□□ -0.91
SSR3-209ENST00000498205 USP17L19D6RCP7 530 aa9.35□□□□□ -0.91
SSR3-209ENST00000498205 USP17L20D6RJB6 530 aa9.35□□□□□ -0.91
SSR3-209ENST00000498205 RFX1P22670 979 aa9.35□□□□□ -0.91
SSR3-209ENST00000498205 USP17L24Q0WX57 530 aa9.35□□□□□ -0.91
SSR3-209ENST00000498205 PTK7Q13308 1070 aa9.35□□□□□ -0.91
SSR3-209ENST00000498205 ELOAQ14241 798 aaKnown RBP9.35□□□□□ -0.91
SSR3-209ENST00000498205 MTFR1Q15390 333 aa9.35□□□□□ -0.91
SSR3-209ENST00000498205 GNASQ5JWF2 1037 aa9.35□□□□□ -0.91
SSR3-209ENST00000498205 TMEM214Q6NUQ4 689 aaKnown RBP9.35□□□□□ -0.91
SSR3-209ENST00000498205 TPCN2Q8NHX9 752 aa9.35□□□□□ -0.91
SSR3-209ENST00000498205 FHDC1Q9C0D6 1143 aaPredicted RBP9.35□□□□□ -0.91
SSR3-209ENST00000498205 A6NJY4 79 aa9.34□□□□□ -0.91
SSR3-209ENST00000498205 SEC13P55735 322 aa9.34□□□□□ -0.91
SSR3-209ENST00000498205 TAS1R3Q7RTX0 852 aa9.34□□□□□ -0.91
SSR3-209ENST00000498205 PPARGC1BQ86YN6 1023 aaKnown RBP9.34□□□□□ -0.91
SSR3-209ENST00000498205 RHBDD1Q8TEB9 315 aa9.34□□□□□ -0.91
SSR3-209ENST00000498205 ZNF358Q9NW07 568 aa9.34□□□□□ -0.91
SSR3-209ENST00000498205 CDK2AP1O14519 115 aa9.33□□□□□ -0.92
SSR3-209ENST00000498205 ANKMY2Q8IV38 441 aa9.33□□□□□ -0.92
SSR3-209ENST00000498205 ZNF594Q96JF6 807 aaPredicted RBP9.33□□□□□ -0.92
SSR3-209ENST00000498205 C1orf115Q9H7X2 142 aa9.33□□□□□ -0.92
SSR3-209ENST00000498205 NXF1Q9UBU9 619 aaKnown RBP9.33□□□□□ -0.92
SSR3-209ENST00000498205 ATG7O95352 703 aa9.32□□□□□ -0.92
SSR3-209ENST00000498205 PRICKLE2Q7Z3G6 844 aa9.32□□□□□ -0.92
SSR3-209ENST00000498205 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.32□□□□□ -0.92
SSR3-209ENST00000498205 SERTAD1Q9UHV2 236 aa9.32□□□□□ -0.92
SSR3-209ENST00000498205 KIAA1024Q9UPX6 916 aa9.32□□□□□ -0.92
SSR3-209ENST00000498205 PTSQ03393 145 aa9.31□□□□□ -0.92
SSR3-209ENST00000498205 CRTC2Q53ET0 693 aaPredicted RBP9.31□□□□□ -0.92
SSR3-209ENST00000498205 NBPF10Q6P3W6 841 aaKnown RBP9.31□□□□□ -0.92
SSR3-209ENST00000498205 FAM200AQ8TCP9 573 aa9.31□□□□□ -0.92
SSR3-209ENST00000498205 SLC16A10Q8TF71 515 aa9.31□□□□□ -0.92
SSR3-209ENST00000498205 NIFKQ9BYG3 293 aaKnown RBP9.31□□□□□ -0.92
SSR3-209ENST00000498205 CHMP3Q9Y3E7 222 aa9.31□□□□□ -0.92
SSR3-209ENST00000498205 ACIN1Q9UKV3 1341 aaKnown RBP9.31□□□□□ -0.92
SSR3-209ENST00000498205 SUPT5HO00267 1087 aaKnown RBP9.3□□□□□ -0.92
SSR3-209ENST00000498205 SRPK2P78362 688 aaKnown RBP9.3□□□□□ -0.92
SSR3-209ENST00000498205 GAS2L2Q8NHY3 880 aa9.3□□□□□ -0.92
SSR3-209ENST00000498205 GMCL1Q96IK5 515 aa9.3□□□□□ -0.92
SSR3-209ENST00000498205 DYRK1BQ9Y463 629 aa9.3□□□□□ -0.92
SSR3-209ENST00000498205 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.29□□□□□ -0.92
SSR3-209ENST00000498205 SLC35F4A4IF30 521 aa9.29□□□□□ -0.92
SSR3-209ENST00000498205 SOBPA7XYQ1 873 aa9.29□□□□□ -0.92
SSR3-209ENST00000498205 DKK1O94907 266 aa9.29□□□□□ -0.92
SSR3-209ENST00000498205 DPYDQ12882 1025 aa9.29□□□□□ -0.92
SSR3-209ENST00000498205 SCHIP1Q9P0W5 487 aaPredicted RBP9.29□□□□□ -0.92
SSR3-209ENST00000498205 A0A1B0GTH6 734 aa9.28□□□□□ -0.92
SSR3-209ENST00000498205 STAU1O95793 577 aaKnown RBP9.28□□□□□ -0.92
SSR3-209ENST00000498205 EPHA4P54764 986 aa9.28□□□□□ -0.92
SSR3-209ENST00000498205 POU4F2Q12837 409 aa9.28□□□□□ -0.92
SSR3-209ENST00000498205 SWI5Q1ZZU3 235 aa9.28□□□□□ -0.92
SSR3-209ENST00000498205 C1orf216Q8TAB5 229 aa9.28□□□□□ -0.92
SSR3-209ENST00000498205 NOVA2Q9UNW9 492 aaKnown RBP9.28□□□□□ -0.92
SSR3-209ENST00000498205 TERTO14746 1132 aaKnown RBP9.27□□□□□ -0.93
SSR3-209ENST00000498205 CCDC155Q8N6L0 562 aa9.27□□□□□ -0.93
SSR3-209ENST00000498205 TIMMDC1Q9NPL8 285 aa9.27□□□□□ -0.93
SSR3-209ENST00000498205 IQSEC3Q9UPP2 1182 aaPredicted RBP9.27□□□□□ -0.93
SSR3-209ENST00000498205 SFI1A8K8P3 1242 aa9.26□□□□□ -0.93
SSR3-209ENST00000498205 H7C1W4 665 aa9.26□□□□□ -0.93
SSR3-209ENST00000498205 FOXK2Q01167 660 aa9.26□□□□□ -0.93
SSR3-209ENST00000498205 NBPF1Q3BBV0 1214 aa9.26□□□□□ -0.93
SSR3-209ENST00000498205 C4orf17Q53FE4 359 aa9.26□□□□□ -0.93
SSR3-209ENST00000498205 ARXQ96QS3 562 aa9.26□□□□□ -0.93
SSR3-209ENST00000498205 PPFIA3O75145 1194 aa9.25□□□□□ -0.93
SSR3-209ENST00000498205 PSMA6P60900 246 aaKnown RBP9.25□□□□□ -0.93
SSR3-209ENST00000498205 STAG2Q8N3U4 1231 aa9.25□□□□□ -0.93
SSR3-209ENST00000498205 SENP3-EIF4A1A0A087X0R7 540 aa9.24□□□□□ -0.93
SSR3-209ENST00000498205 H3BM21 787 aa9.24□□□□□ -0.93
SSR3-209ENST00000498205 F11P03951 625 aa9.24□□□□□ -0.93
SSR3-209ENST00000498205 RHOQP17081 205 aa9.24□□□□□ -0.93
SSR3-209ENST00000498205 LBRQ14739 615 aaKnown RBP9.24□□□□□ -0.93
SSR3-209ENST00000498205 TEAD4Q15561 434 aa9.24□□□□□ -0.93
SSR3-209ENST00000498205 CDCA8Q53HL2 280 aa9.24□□□□□ -0.93
SSR3-209ENST00000498205 TNS4Q8IZW8 715 aa9.24□□□□□ -0.93
SSR3-209ENST00000498205 TSEN2Q8NCE0 465 aaKnown RBP9.24□□□□□ -0.93
SSR3-209ENST00000498205 HINFPQ9BQA5 517 aa9.24□□□□□ -0.93
SSR3-209ENST00000498205 ZDHHC3Q9NYG2 299 aa9.24□□□□□ -0.93
SSR3-209ENST00000498205 CABP1Q9NZU7 370 aa9.24□□□□□ -0.93
SSR3-209ENST00000498205 ITGA6P23229 1130 aa9.23□□□□□ -0.93
SSR3-209ENST00000498205 SLC9A9Q8IVB4 645 aa9.23□□□□□ -0.93
SSR3-209ENST00000498205 NANOS1Q8WY41 292 aaKnown RBP9.23□□□□□ -0.93
SSR3-209ENST00000498205 IRF7Q92985 503 aa9.23□□□□□ -0.93
SSR3-209ENST00000498205 GPC6Q9Y625 555 aaPredicted RBP9.23□□□□□ -0.93
SSR3-209ENST00000498205 CSB-PGBD3P0DP91 1061 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms