RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 DLG5Q8TDM6 1919 aa21.06■□□□□ 0.96
SSBP1-214ENST00000498107 RIPK4P57078 832 aa21.05■□□□□ 0.96
SSBP1-214ENST00000498107 SLC27A3Q5K4L6 730 aa21.05■□□□□ 0.96
SSBP1-214ENST00000498107 CEMIPQ8WUJ3 1361 aa21.05■□□□□ 0.96
SSBP1-214ENST00000498107 TXNRD1Q16881 649 aa21.04■□□□□ 0.96
SSBP1-214ENST00000498107 PALLDQ8WX93 1383 aa21.04■□□□□ 0.96
SSBP1-214ENST00000498107 FAM9BQ8IZU0 186 aa21.03■□□□□ 0.96
SSBP1-214ENST00000498107 LY75O60449 1722 aa21.02■□□□□ 0.96
SSBP1-214ENST00000498107 MCM10Q7L590 875 aa21.02■□□□□ 0.96
SSBP1-214ENST00000498107 MIER1Q8N108 512 aa21.02■□□□□ 0.96
SSBP1-214ENST00000498107 RREB1Q92766 1687 aa21.02■□□□□ 0.95
SSBP1-214ENST00000498107 ATG3Q9NT62 314 aa21.01■□□□□ 0.95
SSBP1-214ENST00000498107 ASAP1Q9ULH1 1129 aa21.01■□□□□ 0.95
SSBP1-214ENST00000498107 APAF1O14727 1248 aa21■□□□□ 0.95
SSBP1-214ENST00000498107 NEUROD2Q15784 382 aa21■□□□□ 0.95
SSBP1-214ENST00000498107 NBPF14Q5TI25 921 aa21■□□□□ 0.95
SSBP1-214ENST00000498107 PROM2Q8N271 834 aa21■□□□□ 0.95
SSBP1-214ENST00000498107 CCNL1Q9UK58 526 aaPredicted RBP21■□□□□ 0.95
SSBP1-214ENST00000498107 DCTN1Q14203 1278 aa20.99■□□□□ 0.95
SSBP1-214ENST00000498107 TTC5Q8N0Z6 440 aa20.99■□□□□ 0.95
SSBP1-214ENST00000498107 RRP7AQ9Y3A4 280 aaKnown RBP20.99■□□□□ 0.95
SSBP1-214ENST00000498107 SIPA1L3O60292 1781 aaPredicted RBP20.98■□□□□ 0.95
SSBP1-214ENST00000498107 TAF7Q15545 349 aaPredicted RBP20.98■□□□□ 0.95
SSBP1-214ENST00000498107 LOC102724428A0A0B4J2F2 783 aa20.97■□□□□ 0.95
SSBP1-214ENST00000498107 BTBD11A6QL63 1104 aa20.97■□□□□ 0.95
SSBP1-214ENST00000498107 SIK1P57059 783 aa20.97■□□□□ 0.95
SSBP1-214ENST00000498107 NCBP3Q53F19 620 aaKnown RBP20.97■□□□□ 0.95
SSBP1-214ENST00000498107 NUP188Q5SRE5 1749 aa20.97■□□□□ 0.95
SSBP1-214ENST00000498107 RBM42Q9BTD8 480 aaKnown RBP20.96■□□□□ 0.95
SSBP1-214ENST00000498107 CALD1Q05682 793 aaKnown RBP20.95■□□□□ 0.94
SSBP1-214ENST00000498107 NGEFQ8N5V2 710 aa20.95■□□□□ 0.94
SSBP1-214ENST00000498107 PAPPAQ13219 1627 aa20.95■□□□□ 0.94
SSBP1-214ENST00000498107 ZNF831Q5JPB2 1677 aa20.94■□□□□ 0.94
SSBP1-214ENST00000498107 ATP6V1AP38606 617 aa20.94■□□□□ 0.94
SSBP1-214ENST00000498107 ZNF790Q6PG37 636 aa20.94■□□□□ 0.94
SSBP1-214ENST00000498107 LRRC4BQ9NT99 713 aa20.94■□□□□ 0.94
SSBP1-214ENST00000498107 TRIM35Q9UPQ4 493 aa20.94■□□□□ 0.94
SSBP1-214ENST00000498107 PTCD1O75127 700 aaKnown RBP20.93■□□□□ 0.94
SSBP1-214ENST00000498107 SLC39A6Q13433 755 aa20.93■□□□□ 0.94
SSBP1-214ENST00000498107 CCDC27Q2M243 656 aa20.93■□□□□ 0.94
SSBP1-214ENST00000498107 BABAM1Q9NWV8 329 aa20.93■□□□□ 0.94
SSBP1-214ENST00000498107 STK32BQ9NY57 414 aa20.93■□□□□ 0.94
SSBP1-214ENST00000498107 THUMPD2Q9BTF0 503 aaKnown RBP20.92■□□□□ 0.94
SSBP1-214ENST00000498107 VSIG10Q8N0Z9 540 aa20.91■□□□□ 0.94
SSBP1-214ENST00000498107 FMNL2Q96PY5 1086 aa20.91■□□□□ 0.94
SSBP1-214ENST00000498107 UBR2Q8IWV8 1755 aa20.9■□□□□ 0.94
SSBP1-214ENST00000498107 C5P01031 1676 aa20.89■□□□□ 0.94
SSBP1-214ENST00000498107 KCNQ4P56696 695 aa20.89■□□□□ 0.93
SSBP1-214ENST00000498107 SLC15A2Q16348 729 aa20.89■□□□□ 0.93
SSBP1-214ENST00000498107 TAF1LQ8IZX4 1826 aa20.89■□□□□ 0.93
SSBP1-214ENST00000498107 KCPQ6ZWJ8 1503 aa20.88■□□□□ 0.93
SSBP1-214ENST00000498107 TEX13AQ9BXU3 409 aaPredicted RBP20.88■□□□□ 0.93
SSBP1-214ENST00000498107 CICQ96RK0 1608 aaPredicted RBP20.87■□□□□ 0.93
SSBP1-214ENST00000498107 ZNF496Q96IT1 587 aaPredicted RBP20.87■□□□□ 0.93
SSBP1-214ENST00000498107 SLC4A9Q96Q91 983 aa20.87■□□□□ 0.93
SSBP1-214ENST00000498107 TSPYL4Q9UJ04 414 aa20.87■□□□□ 0.93
SSBP1-214ENST00000498107 HEG1Q9ULI3 1381 aa20.86■□□□□ 0.93
SSBP1-214ENST00000498107 ITPK1Q13572 414 aa20.86■□□□□ 0.93
SSBP1-214ENST00000498107 WWC1Q8IX03 1113 aa20.86■□□□□ 0.93
SSBP1-214ENST00000498107 AKT1S1Q96B36 256 aa20.86■□□□□ 0.93
SSBP1-214ENST00000498107 AK7Q96M32 723 aa20.86■□□□□ 0.93
SSBP1-214ENST00000498107 CFAP44Q96MT7 982 aa20.86■□□□□ 0.93
SSBP1-214ENST00000498107 ANO8Q9HCE9 1232 aaPredicted RBP20.86■□□□□ 0.93
SSBP1-214ENST00000498107 MIS18AQ9NYP9 233 aa20.86■□□□□ 0.93
SSBP1-214ENST00000498107 SRCAPQ6ZRS2 3230 aa20.85■□□□□ 0.93
SSBP1-214ENST00000498107 KDM3BQ7LBC6 1761 aa20.85■□□□□ 0.93
SSBP1-214ENST00000498107 C4BP0C0L5 1744 aa20.85■□□□□ 0.93
SSBP1-214ENST00000498107 GNAI1P63096 354 aa20.85■□□□□ 0.93
SSBP1-214ENST00000498107 RC3H1Q5TC82 1133 aaKnown RBP20.85■□□□□ 0.93
SSBP1-214ENST00000498107 TFCP2L1Q9NZI6 479 aa20.85■□□□□ 0.93
SSBP1-214ENST00000498107 CHL1O00533 1208 aa20.84■□□□□ 0.93
SSBP1-214ENST00000498107 KCNQ3O43525 872 aa20.84■□□□□ 0.93
SSBP1-214ENST00000498107 STARD3NLO95772 234 aa20.84■□□□□ 0.93
SSBP1-214ENST00000498107 R3HDM1Q15032 1099 aaKnown RBP20.84■□□□□ 0.93
SSBP1-214ENST00000498107 LINC00116Q8NCU8 138 aa20.84■□□□□ 0.93
SSBP1-214ENST00000498107 IFT57Q9NWB7 429 aa20.84■□□□□ 0.93
SSBP1-214ENST00000498107 LAS1LQ9Y4W2 734 aaKnown RBP20.84■□□□□ 0.93
SSBP1-214ENST00000498107 CNTNAP4Q9C0A0 1308 aa20.83■□□□□ 0.93
SSBP1-214ENST00000498107 SNRPA1P09661 255 aaKnown RBP20.83■□□□□ 0.93
SSBP1-214ENST00000498107 ZNF827Q17R98 1081 aa20.83■□□□□ 0.93
SSBP1-214ENST00000498107 DNAJC10Q8IXB1 793 aa20.83■□□□□ 0.93
SSBP1-214ENST00000498107 FLAD1Q8NFF5 587 aa20.83■□□□□ 0.93
SSBP1-214ENST00000498107 IL16Q14005 1332 aa20.82■□□□□ 0.92
SSBP1-214ENST00000498107 COL5A3P25940 1745 aaPredicted RBP20.82■□□□□ 0.92
SSBP1-214ENST00000498107 TJP1Q07157 1748 aa20.82■□□□□ 0.92
SSBP1-214ENST00000498107 WDR63Q8IWG1 891 aa20.82■□□□□ 0.92
SSBP1-214ENST00000498107 SALL2Q9Y467 1007 aaPredicted RBP20.82■□□□□ 0.92
SSBP1-214ENST00000498107 PSDA5PKW4 1024 aaPredicted RBP20.81■□□□□ 0.92
SSBP1-214ENST00000498107 EIF4A1P60842 406 aaKnown RBP20.81■□□□□ 0.92
SSBP1-214ENST00000498107 QSER1Q2KHR3 1735 aa20.81■□□□□ 0.92
SSBP1-214ENST00000498107 ZNF853P0CG23 659 aa20.8■□□□□ 0.92
SSBP1-214ENST00000498107 CYP19A1P11511 503 aaPredicted RBP20.8■□□□□ 0.92
SSBP1-214ENST00000498107 CRKLP46109 303 aaKnown RBP20.8■□□□□ 0.92
SSBP1-214ENST00000498107 SENP3-EIF4A1A0A087X0R7 540 aa20.79■□□□□ 0.92
SSBP1-214ENST00000498107 GNPATO15228 680 aa20.79■□□□□ 0.92
SSBP1-214ENST00000498107 SSFA2P28290 1259 aa20.79■□□□□ 0.92
SSBP1-214ENST00000498107 RTCBQ9Y3I0 505 aaKnown RBP20.79■□□□□ 0.92
SSBP1-214ENST00000498107 CCDC87Q9NVE4 849 aa20.78■□□□□ 0.92
SSBP1-214ENST00000498107 GIGYF1O75420 1035 aaPredicted RBP20.77■□□□□ 0.92
SSBP1-214ENST00000498107 RPS6KA4O75676 772 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms