RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 PHF14O94880 888 aa27.66■■■□□ 2.02
LMBR1-219ENST00000498034 ATP6V1AP38606 617 aa27.66■■■□□ 2.02
LMBR1-219ENST00000498034 MTHFSP49914 203 aa27.66■■■□□ 2.02
LMBR1-219ENST00000498034 CC2D1BQ5T0F9 858 aaKnown RBP27.66■■■□□ 2.02
LMBR1-219ENST00000498034 NLGN2Q8NFZ4 835 aa27.65■■■□□ 2.02
LMBR1-219ENST00000498034 KDM6AO15550 1401 aaPredicted RBP27.65■■■□□ 2.02
LMBR1-219ENST00000498034 KDRP35968 1356 aa27.63■■■□□ 2.01
LMBR1-219ENST00000498034 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.63■■■□□ 2.01
LMBR1-219ENST00000498034 GPR162Q16538 588 aa27.63■■■□□ 2.01
LMBR1-219ENST00000498034 CABP4P57796 275 aa27.62■■■□□ 2.01
LMBR1-219ENST00000498034 C1orf141Q5JVX7 400 aa27.62■■■□□ 2.01
LMBR1-219ENST00000498034 RBM42Q9BTD8 480 aaKnown RBP27.61■■■□□ 2.01
LMBR1-219ENST00000498034 SSFA2P28290 1259 aa27.6■■■□□ 2.01
LMBR1-219ENST00000498034 CNGB1Q14028 1251 aaPredicted RBP27.6■■■□□ 2.01
LMBR1-219ENST00000498034 PELP1Q8IZL8 1130 aaKnown RBP27.6■■■□□ 2.01
LMBR1-219ENST00000498034 SLC4A9Q96Q91 983 aa27.6■■■□□ 2.01
LMBR1-219ENST00000498034 GNPATO15228 680 aa27.59■■■□□ 2.01
LMBR1-219ENST00000498034 HMOX1P09601 288 aa27.57■■■□□ 2
LMBR1-219ENST00000498034 CHD4Q14839 1912 aa27.57■■■□□ 2
LMBR1-219ENST00000498034 NFATC2IPQ8NCF5 419 aa27.56■■■□□ 2
LMBR1-219ENST00000498034 DIAPH1O60610 1272 aaKnown RBP27.54■■■□□ 2
LMBR1-219ENST00000498034 ZNF831Q5JPB2 1677 aa27.53■■■□□ 2
LMBR1-219ENST00000498034 NPC1L1Q9UHC9 1359 aa27.53■■■□□ 2
LMBR1-219ENST00000498034 AKAP4Q5JQC9 854 aa27.52■■■□□ 2
LMBR1-219ENST00000498034 CD2APQ9Y5K6 639 aa27.52■■■□□ 2
LMBR1-219ENST00000498034 SCN11AQ9UI33 1791 aa27.52■■■□□ 2
LMBR1-219ENST00000498034 PTCD1O75127 700 aaKnown RBP27.51■■□□□ 1.99
LMBR1-219ENST00000498034 ZNF784Q8NCA9 323 aaPredicted RBP27.51■■□□□ 1.99
LMBR1-219ENST00000498034 COL5A3P25940 1745 aaPredicted RBP27.5■■□□□ 1.99
LMBR1-219ENST00000498034 YBX3P16989 372 aaKnown RBP eCLIP27.5■■□□□ 1.99
LMBR1-219ENST00000498034 RTCBQ9Y3I0 505 aaKnown RBP27.5■■□□□ 1.99
LMBR1-219ENST00000498034 RC3H1Q5TC82 1133 aaKnown RBP27.49■■□□□ 1.99
LMBR1-219ENST00000498034 LGR6Q9HBX8 967 aa27.49■■□□□ 1.99
LMBR1-219ENST00000498034 UTRNP46939 3433 aa27.48■■□□□ 1.99
LMBR1-219ENST00000498034 TRAPPC3LQ5T215 181 aa27.48■■□□□ 1.99
LMBR1-219ENST00000498034 CNTNAP4Q9C0A0 1308 aa27.47■■□□□ 1.99
LMBR1-219ENST00000498034 MTHFSDQ2M296 383 aaKnown RBP27.47■■□□□ 1.99
LMBR1-219ENST00000498034 COL3A1P02461 1466 aaPredicted RBP27.46■■□□□ 1.99
LMBR1-219ENST00000498034 ARHGEF1Q92888 912 aaKnown RBP27.46■■□□□ 1.99
LMBR1-219ENST00000498034 RNMTO43148 476 aaKnown RBP27.45■■□□□ 1.98
LMBR1-219ENST00000498034 RPS6KA4O75676 772 aa27.45■■□□□ 1.98
LMBR1-219ENST00000498034 SLC52A2Q9HAB3 445 aa27.45■■□□□ 1.98
LMBR1-219ENST00000498034 MYH14Q7Z406 1995 aaKnown RBP27.45■■□□□ 1.98
LMBR1-219ENST00000498034 U2SURPO15042 1029 aaKnown RBP27.44■■□□□ 1.98
LMBR1-219ENST00000498034 VIRMAQ69YN4 1812 aaKnown RBP27.44■■□□□ 1.98
LMBR1-219ENST00000498034 GRIN3BO60391 1043 aa27.43■■□□□ 1.98
LMBR1-219ENST00000498034 TJP1Q07157 1748 aa27.42■■□□□ 1.98
LMBR1-219ENST00000498034 MMP10P09238 476 aa27.42■■□□□ 1.98
LMBR1-219ENST00000498034 ADRA2BP18089 450 aa27.42■■□□□ 1.98
LMBR1-219ENST00000498034 CRKLP46109 303 aaKnown RBP27.41■■□□□ 1.98
LMBR1-219ENST00000498034 RFC4P35249 363 aa27.4■■□□□ 1.98
LMBR1-219ENST00000498034 SLC39A6Q13433 755 aa27.4■■□□□ 1.98
LMBR1-219ENST00000498034 MRC1P22897 1456 aa27.39■■□□□ 1.98
LMBR1-219ENST00000498034 NLGN1Q8N2Q7 840 aa27.39■■□□□ 1.98
LMBR1-219ENST00000498034 WWC3Q9ULE0 1092 aa27.39■■□□□ 1.98
LMBR1-219ENST00000498034 GYS1P13807 737 aa27.38■■□□□ 1.97
LMBR1-219ENST00000498034 CICQ96RK0 1608 aaPredicted RBP27.38■■□□□ 1.97
LMBR1-219ENST00000498034 ADAMTS7Q9UKP4 1686 aa27.37■■□□□ 1.97
LMBR1-219ENST00000498034 C4AP0C0L4 1744 aa27.37■■□□□ 1.97
LMBR1-219ENST00000498034 DNAJC10Q8IXB1 793 aa27.37■■□□□ 1.97
LMBR1-219ENST00000498034 INTS5Q6P9B9 1019 aaKnown RBP27.35■■□□□ 1.97
LMBR1-219ENST00000498034 SRP68Q9UHB9 627 aaKnown RBP27.34■■□□□ 1.97
LMBR1-219ENST00000498034 CFAP53Q96M91 514 aa27.33■■□□□ 1.97
LMBR1-219ENST00000498034 GOLGB1Q14789 3259 aaKnown RBP27.33■■□□□ 1.96
LMBR1-219ENST00000498034 KCPQ6ZWJ8 1503 aa27.32■■□□□ 1.96
LMBR1-219ENST00000498034 PPP2R1AP30153 589 aa27.31■■□□□ 1.96
LMBR1-219ENST00000498034 GAS2L2Q8NHY3 880 aa27.31■■□□□ 1.96
LMBR1-219ENST00000498034 CCDC87Q9NVE4 849 aa27.31■■□□□ 1.96
LMBR1-219ENST00000498034 KIF13BQ9NQT8 1826 aa27.3■■□□□ 1.96
LMBR1-219ENST00000498034 GNAT3A8MTJ3 354 aa27.3■■□□□ 1.96
LMBR1-219ENST00000498034 CYP19A1P11511 503 aaPredicted RBP27.3■■□□□ 1.96
LMBR1-219ENST00000498034 IL17REQ8NFR9 667 aa27.3■■□□□ 1.96
LMBR1-219ENST00000498034 PARP3Q9Y6F1 533 aa27.3■■□□□ 1.96
LMBR1-219ENST00000498034 USP42Q9H9J4 1324 aaKnown RBP27.29■■□□□ 1.96
LMBR1-219ENST00000498034 PRKAR2BP31323 418 aa27.28■■□□□ 1.96
LMBR1-219ENST00000498034 FKBP8Q14318 412 aa27.28■■□□□ 1.96
LMBR1-219ENST00000498034 PHACTR3Q96KR7 559 aa27.28■■□□□ 1.96
LMBR1-219ENST00000498034 N4BP2Q86UW6 1770 aaPredicted RBP27.27■■□□□ 1.96
LMBR1-219ENST00000498034 KIAA1551Q9HCM1 1747 aa27.27■■□□□ 1.96
LMBR1-219ENST00000498034 PXDNLA1KZ92 1463 aa27.27■■□□□ 1.96
LMBR1-219ENST00000498034 C10orf71Q711Q0 1435 aa27.27■■□□□ 1.96
LMBR1-219ENST00000498034 RSPH6AQ9H0K4 717 aa27.27■■□□□ 1.96
LMBR1-219ENST00000498034 SOS1Q07889 1333 aaPredicted RBP27.26■■□□□ 1.95
LMBR1-219ENST00000498034 TGFB2P61812 414 aa27.26■■□□□ 1.95
LMBR1-219ENST00000498034 TEFQ10587 303 aa27.26■■□□□ 1.95
LMBR1-219ENST00000498034 NUDCQ9Y266 331 aa27.26■■□□□ 1.95
LMBR1-219ENST00000498034 UBR2Q8IWV8 1755 aa27.26■■□□□ 1.95
LMBR1-219ENST00000498034 A0A0G2JLW4 131 aa27.25■■□□□ 1.95
LMBR1-219ENST00000498034 TTC5Q8N0Z6 440 aa27.25■■□□□ 1.95
LMBR1-219ENST00000498034 VSIG10Q8N0Z9 540 aa27.25■■□□□ 1.95
LMBR1-219ENST00000498034 ZBTB1Q9Y2K1 713 aa27.24■■□□□ 1.95
LMBR1-219ENST00000498034 U2AF1L5P0DN76 240 aaPredicted RBP27.23■■□□□ 1.95
LMBR1-219ENST00000498034 U2AF1Q01081 240 aaKnown RBP eCLIP27.23■■□□□ 1.95
LMBR1-219ENST00000498034 USPL1Q5W0Q7 1092 aa27.23■■□□□ 1.95
LMBR1-219ENST00000498034 ZPR1O75312 459 aa27.22■■□□□ 1.95
LMBR1-219ENST00000498034 DPEP1P16444 411 aa27.22■■□□□ 1.95
LMBR1-219ENST00000498034 DDR1Q08345 913 aa27.22■■□□□ 1.95
LMBR1-219ENST00000498034 SIPA1L3O60292 1781 aaPredicted RBP27.22■■□□□ 1.95
LMBR1-219ENST00000498034 ZNF790Q6PG37 636 aa27.21■■□□□ 1.95
LMBR1-219ENST00000498034 ZNF496Q96IT1 587 aaPredicted RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms