RNA–Protein interactions for RNA: ENST00000497287.5

GPATCH4-208, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-208ENST00000497287 CHMP4AQ9BY43 222 aa9.4□□□□□ -0.9
GPATCH4-208ENST00000497287 SLC52A2Q9HAB3 445 aa9.4□□□□□ -0.9
GPATCH4-208ENST00000497287 VIRMAQ69YN4 1812 aaKnown RBP9.4□□□□□ -0.91
GPATCH4-208ENST00000497287 SCN11AQ9UI33 1791 aa9.4□□□□□ -0.91
GPATCH4-208ENST00000497287 KDM6AO15550 1401 aaPredicted RBP9.39□□□□□ -0.91
GPATCH4-208ENST00000497287 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.39□□□□□ -0.91
GPATCH4-208ENST00000497287 ADAMTS7Q9UKP4 1686 aa9.39□□□□□ -0.91
GPATCH4-208ENST00000497287 BCAR3O75815 825 aa9.39□□□□□ -0.91
GPATCH4-208ENST00000497287 CANXP27824 592 aaKnown RBP9.39□□□□□ -0.91
GPATCH4-208ENST00000497287 CABP4P57796 275 aa9.39□□□□□ -0.91
GPATCH4-208ENST00000497287 DDB1Q16531 1140 aa9.39□□□□□ -0.91
GPATCH4-208ENST00000497287 C8orf58Q8NAV2 365 aa9.39□□□□□ -0.91
GPATCH4-208ENST00000497287 TRPC5Q9UL62 973 aaPredicted RBP9.39□□□□□ -0.91
GPATCH4-208ENST00000497287 WNK3Q9BYP7 1800 aa9.39□□□□□ -0.91
GPATCH4-208ENST00000497287 TNS2Q63HR2 1409 aa9.39□□□□□ -0.91
GPATCH4-208ENST00000497287 ELL2O00472 640 aaPredicted RBP9.38□□□□□ -0.91
GPATCH4-208ENST00000497287 TSPYL6Q8N831 410 aa9.38□□□□□ -0.91
GPATCH4-208ENST00000497287 NFATC2IPQ8NCF5 419 aa9.38□□□□□ -0.91
GPATCH4-208ENST00000497287 SMC4Q9NTJ3 1288 aa9.38□□□□□ -0.91
GPATCH4-208ENST00000497287 SHANK3Q9BYB0 1731 aa9.37□□□□□ -0.91
GPATCH4-208ENST00000497287 MRC1P22897 1456 aa9.37□□□□□ -0.91
GPATCH4-208ENST00000497287 IPO8O15397 1037 aaKnown RBP9.37□□□□□ -0.91
GPATCH4-208ENST00000497287 HOXB7P09629 217 aa9.37□□□□□ -0.91
GPATCH4-208ENST00000497287 MS4A1P11836 297 aa9.37□□□□□ -0.91
GPATCH4-208ENST00000497287 RXRBP28702 533 aa9.37□□□□□ -0.91
GPATCH4-208ENST00000497287 BRPF1P55201 1214 aaPredicted RBP9.37□□□□□ -0.91
GPATCH4-208ENST00000497287 EIF4A1P60842 406 aaKnown RBP9.37□□□□□ -0.91
GPATCH4-208ENST00000497287 IRX6P78412 446 aaPredicted RBP9.37□□□□□ -0.91
GPATCH4-208ENST00000497287 FAM98CQ17RN3 349 aaKnown RBP9.37□□□□□ -0.91
GPATCH4-208ENST00000497287 SSH1Q8WYL5 1049 aa9.37□□□□□ -0.91
GPATCH4-208ENST00000497287 QTRT2Q9H974 415 aaKnown RBP9.37□□□□□ -0.91
GPATCH4-208ENST00000497287 KIF16BQ96L93 1317 aa9.36□□□□□ -0.91
GPATCH4-208ENST00000497287 PLIN1O60240 522 aa9.36□□□□□ -0.91
GPATCH4-208ENST00000497287 KRT24Q2M2I5 525 aa9.36□□□□□ -0.91
GPATCH4-208ENST00000497287 ZNF790Q6PG37 636 aa9.36□□□□□ -0.91
GPATCH4-208ENST00000497287 TTC5Q8N0Z6 440 aa9.36□□□□□ -0.91
GPATCH4-208ENST00000497287 FRAT1Q92837 279 aaPredicted RBP9.36□□□□□ -0.91
GPATCH4-208ENST00000497287 GJD4Q96KN9 370 aaPredicted RBP9.36□□□□□ -0.91
GPATCH4-208ENST00000497287 BCL2L13Q9BXK5 485 aa9.36□□□□□ -0.91
GPATCH4-208ENST00000497287 SIPA1L3O60292 1781 aaPredicted RBP9.36□□□□□ -0.91
GPATCH4-208ENST00000497287 KDM3BQ7LBC6 1761 aa9.36□□□□□ -0.91
GPATCH4-208ENST00000497287 ATRNO75882 1429 aa9.36□□□□□ -0.91
GPATCH4-208ENST00000497287 A0A0G2JS52 829 aa9.35□□□□□ -0.91
GPATCH4-208ENST00000497287 KCNQ3O43525 872 aa9.35□□□□□ -0.91
GPATCH4-208ENST00000497287 MYT1Q01538 1121 aa9.35□□□□□ -0.91
GPATCH4-208ENST00000497287 PDE3AQ14432 1141 aa9.35□□□□□ -0.91
GPATCH4-208ENST00000497287 CCDC30Q5VVM6 783 aa9.35□□□□□ -0.91
GPATCH4-208ENST00000497287 ZKSCAN2Q63HK3 967 aa9.35□□□□□ -0.91
GPATCH4-208ENST00000497287 MRPL50Q8N5N7 158 aaKnown RBP9.35□□□□□ -0.91
GPATCH4-208ENST00000497287 STK31Q9BXU1 1019 aa9.35□□□□□ -0.91
GPATCH4-208ENST00000497287 TMOD3Q9NYL9 352 aa9.35□□□□□ -0.91
GPATCH4-208ENST00000497287 SLC39A6Q13433 755 aa9.34□□□□□ -0.91
GPATCH4-208ENST00000497287 FMNL2Q96PY5 1086 aa9.34□□□□□ -0.91
GPATCH4-208ENST00000497287 NOB1Q9ULX3 412 aaKnown RBP9.34□□□□□ -0.91
GPATCH4-208ENST00000497287 GIGYF1O75420 1035 aaPredicted RBP9.33□□□□□ -0.92
GPATCH4-208ENST00000497287 RBM6P78332 1123 aaKnown RBP9.33□□□□□ -0.92
GPATCH4-208ENST00000497287 HDGFL1Q5TGJ6 251 aa9.33□□□□□ -0.92
GPATCH4-208ENST00000497287 ATF7IPQ6VMQ6 1270 aa9.33□□□□□ -0.92
GPATCH4-208ENST00000497287 FTSJ3Q8IY81 847 aaKnown RBP9.33□□□□□ -0.92
GPATCH4-208ENST00000497287 MARCH10Q8NA82 808 aaPredicted RBP9.33□□□□□ -0.92
GPATCH4-208ENST00000497287 ARHGAP45Q92619 1136 aa9.33□□□□□ -0.92
GPATCH4-208ENST00000497287 KAT6BQ8WYB5 2073 aa9.33□□□□□ -0.92
GPATCH4-208ENST00000497287 TCERG1O14776 1098 aaKnown RBP9.32□□□□□ -0.92
GPATCH4-208ENST00000497287 ONECUT3O60422 494 aaPredicted RBP9.32□□□□□ -0.92
GPATCH4-208ENST00000497287 SLC4A2P04920 1241 aa9.32□□□□□ -0.92
GPATCH4-208ENST00000497287 SNRPA1P09661 255 aaKnown RBP9.32□□□□□ -0.92
GPATCH4-208ENST00000497287 EIF2S2P20042 333 aaKnown RBP9.32□□□□□ -0.92
GPATCH4-208ENST00000497287 DZIP1LQ8IYY4 767 aaKnown RBP9.32□□□□□ -0.92
GPATCH4-208ENST00000497287 PIGBQ92521 554 aa9.32□□□□□ -0.92
GPATCH4-208ENST00000497287 API5Q9BZZ5 524 aaKnown RBP9.32□□□□□ -0.92
GPATCH4-208ENST00000497287 HEG1Q9ULI3 1381 aa9.32□□□□□ -0.92
GPATCH4-208ENST00000497287 GLI3P10071 1580 aa9.32□□□□□ -0.92
GPATCH4-208ENST00000497287 CACNA1FO60840 1977 aa9.32□□□□□ -0.92
GPATCH4-208ENST00000497287 PTPRCP08575 1304 aa9.31□□□□□ -0.92
GPATCH4-208ENST00000497287 PRIM1P49642 420 aaKnown RBP9.31□□□□□ -0.92
GPATCH4-208ENST00000497287 C20orf194Q5TEA3 1177 aa9.31□□□□□ -0.92
GPATCH4-208ENST00000497287 EXOC6Q8TAG9 804 aa9.31□□□□□ -0.92
GPATCH4-208ENST00000497287 SYTL4Q96C24 671 aaPredicted RBP9.31□□□□□ -0.92
GPATCH4-208ENST00000497287 ZNF496Q96IT1 587 aaPredicted RBP9.31□□□□□ -0.92
GPATCH4-208ENST00000497287 CRBNQ96SW2 442 aa9.31□□□□□ -0.92
GPATCH4-208ENST00000497287 PPP4R2Q9NY27 417 aa9.31□□□□□ -0.92
GPATCH4-208ENST00000497287 THSD7AQ9UPZ6 1657 aa9.31□□□□□ -0.92
GPATCH4-208ENST00000497287 TOGARAM1Q9Y4F4 1720 aa9.31□□□□□ -0.92
GPATCH4-208ENST00000497287 TRIM27P14373 513 aa9.3□□□□□ -0.92
GPATCH4-208ENST00000497287 SEPT12Q8IYM1 358 aa9.3□□□□□ -0.92
GPATCH4-208ENST00000497287 PANK1Q8TE04 598 aa9.3□□□□□ -0.92
GPATCH4-208ENST00000497287 NECTIN2Q92692 538 aa9.3□□□□□ -0.92
GPATCH4-208ENST00000497287 ITGB4P16144 1822 aa9.3□□□□□ -0.92
GPATCH4-208ENST00000497287 BCL9O00512 1426 aa9.3□□□□□ -0.92
GPATCH4-208ENST00000497287 RGS12O14924 1447 aa9.3□□□□□ -0.92
GPATCH4-208ENST00000497287 AAMPQ13685 434 aa9.29□□□□□ -0.92
GPATCH4-208ENST00000497287 VSIG10Q8N0Z9 540 aa9.29□□□□□ -0.92
GPATCH4-208ENST00000497287 CLUAP1Q96AJ1 413 aa9.29□□□□□ -0.92
GPATCH4-208ENST00000497287 ACSBG1Q96GR2 724 aa9.29□□□□□ -0.92
GPATCH4-208ENST00000497287 TEX13AQ9BXU3 409 aaPredicted RBP9.29□□□□□ -0.92
GPATCH4-208ENST00000497287 CHMP4BQ9H444 224 aaKnown RBP9.29□□□□□ -0.92
GPATCH4-208ENST00000497287 ATG3Q9NT62 314 aa9.29□□□□□ -0.92
GPATCH4-208ENST00000497287 DBF4Q9UBU7 674 aaPredicted RBP9.29□□□□□ -0.92
GPATCH4-208ENST00000497287 DOT1LQ8TEK3 1739 aa9.28□□□□□ -0.92
GPATCH4-208ENST00000497287 PAPPAQ13219 1627 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms