RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 THUMPD2Q9BTF0 503 aaKnown RBP20.75■□□□□ 0.91
PMF1-205ENST00000497069 TRIM35Q9UPQ4 493 aa20.75■□□□□ 0.91
PMF1-205ENST00000497069 SALL2Q9Y467 1007 aaPredicted RBP20.75■□□□□ 0.91
PMF1-205ENST00000497069 BTBD11A6QL63 1104 aa20.74■□□□□ 0.91
PMF1-205ENST00000497069 CALD1Q05682 793 aaKnown RBP20.74■□□□□ 0.91
PMF1-205ENST00000497069 TAF7Q15545 349 aaPredicted RBP20.74■□□□□ 0.91
PMF1-205ENST00000497069 NCBP3Q53F19 620 aaKnown RBP20.74■□□□□ 0.91
PMF1-205ENST00000497069 NGEFQ8N5V2 710 aa20.74■□□□□ 0.91
PMF1-205ENST00000497069 DLG5Q8TDM6 1919 aa20.74■□□□□ 0.91
PMF1-205ENST00000497069 BTAF1O14981 1849 aa20.74■□□□□ 0.91
PMF1-205ENST00000497069 ITGB4P16144 1822 aa20.74■□□□□ 0.91
PMF1-205ENST00000497069 EN1Q05925 392 aaPredicted RBP20.73■□□□□ 0.91
PMF1-205ENST00000497069 CCDC27Q2M243 656 aa20.73■□□□□ 0.91
PMF1-205ENST00000497069 PALLDQ8WX93 1383 aa20.72■□□□□ 0.91
PMF1-205ENST00000497069 DEFB132Q7Z7B7 95 aa20.72■□□□□ 0.91
PMF1-205ENST00000497069 TTC5Q8N0Z6 440 aa20.72■□□□□ 0.91
PMF1-205ENST00000497069 ATG3Q9NT62 314 aa20.72■□□□□ 0.91
PMF1-205ENST00000497069 ASAP1Q9ULH1 1129 aa20.72■□□□□ 0.91
PMF1-205ENST00000497069 EZH2Q15910 746 aaKnown RBP20.7■□□□□ 0.9
PMF1-205ENST00000497069 VIRMAQ69YN4 1812 aaKnown RBP20.69■□□□□ 0.9
PMF1-205ENST00000497069 SLC39A6Q13433 755 aa20.69■□□□□ 0.9
PMF1-205ENST00000497069 WWC1Q8IX03 1113 aa20.69■□□□□ 0.9
PMF1-205ENST00000497069 CAMKK2Q96RR4 588 aa20.69■□□□□ 0.9
PMF1-205ENST00000497069 RBM42Q9BTD8 480 aaKnown RBP20.69■□□□□ 0.9
PMF1-205ENST00000497069 LAS1LQ9Y4W2 734 aaKnown RBP20.69■□□□□ 0.9
PMF1-205ENST00000497069 TXNRD1Q16881 649 aa20.68■□□□□ 0.9
PMF1-205ENST00000497069 ZNF790Q6PG37 636 aa20.68■□□□□ 0.9
PMF1-205ENST00000497069 PTCD1O75127 700 aaKnown RBP20.67■□□□□ 0.9
PMF1-205ENST00000497069 SLC27A3Q5K4L6 730 aa20.67■□□□□ 0.9
PMF1-205ENST00000497069 MIS18AQ9NYP9 233 aa20.67■□□□□ 0.9
PMF1-205ENST00000497069 TSPYL4Q9UJ04 414 aa20.67■□□□□ 0.9
PMF1-205ENST00000497069 CCNL1Q9UK58 526 aaPredicted RBP20.67■□□□□ 0.9
PMF1-205ENST00000497069 BABAM1Q9NWV8 329 aa20.66■□□□□ 0.9
PMF1-205ENST00000497069 RGPD3A6NKT7 1758 aaPredicted RBP20.65■□□□□ 0.9
PMF1-205ENST00000497069 SIPA1L3O60292 1781 aaPredicted RBP20.65■□□□□ 0.9
PMF1-205ENST00000497069 RGPD4Q7Z3J3 1758 aa20.65■□□□□ 0.9
PMF1-205ENST00000497069 LOC102724428A0A0B4J2F2 783 aa20.65■□□□□ 0.9
PMF1-205ENST00000497069 HMGB2P26583 209 aaKnown RBP20.65■□□□□ 0.9
PMF1-205ENST00000497069 SIK1P57059 783 aa20.65■□□□□ 0.9
PMF1-205ENST00000497069 ATP6V1AP38606 617 aa20.64■□□□□ 0.89
PMF1-205ENST00000497069 GNAI1P63096 354 aa20.64■□□□□ 0.89
PMF1-205ENST00000497069 HNRNPUQ00839 825 aaKnown RBP eCLIP20.64■□□□□ 0.89
PMF1-205ENST00000497069 WDR63Q8IWG1 891 aa20.64■□□□□ 0.89
PMF1-205ENST00000497069 CFAP44Q96MT7 982 aa20.64■□□□□ 0.89
PMF1-205ENST00000497069 FMNL2Q96PY5 1086 aa20.64■□□□□ 0.89
PMF1-205ENST00000497069 IFT57Q9NWB7 429 aa20.64■□□□□ 0.89
PMF1-205ENST00000497069 IL16Q14005 1332 aa20.63■□□□□ 0.89
PMF1-205ENST00000497069 PROM2Q8N271 834 aa20.63■□□□□ 0.89
PMF1-205ENST00000497069 PAPPAQ13219 1627 aa20.63■□□□□ 0.89
PMF1-205ENST00000497069 CHL1O00533 1208 aa20.62■□□□□ 0.89
PMF1-205ENST00000497069 KCNQ3O43525 872 aa20.61■□□□□ 0.89
PMF1-205ENST00000497069 ZNF496Q96IT1 587 aaPredicted RBP20.61■□□□□ 0.89
PMF1-205ENST00000497069 LY75O60449 1722 aa20.61■□□□□ 0.89
PMF1-205ENST00000497069 KCNQ4P56696 695 aa20.6■□□□□ 0.89
PMF1-205ENST00000497069 VSIG10Q8N0Z9 540 aa20.6■□□□□ 0.89
PMF1-205ENST00000497069 LRRC4BQ9NT99 713 aa20.6■□□□□ 0.89
PMF1-205ENST00000497069 KCPQ6ZWJ8 1503 aa20.59■□□□□ 0.89
PMF1-205ENST00000497069 ZNF853P0CG23 659 aa20.59■□□□□ 0.89
PMF1-205ENST00000497069 NBPF14Q5TI25 921 aa20.59■□□□□ 0.89
PMF1-205ENST00000497069 HEG1Q9ULI3 1381 aa20.59■□□□□ 0.89
PMF1-205ENST00000497069 EIF4A1P60842 406 aaKnown RBP20.58■□□□□ 0.89
PMF1-205ENST00000497069 SLC4A9Q96Q91 983 aa20.58■□□□□ 0.89
PMF1-205ENST00000497069 TEX13AQ9BXU3 409 aaPredicted RBP20.58■□□□□ 0.89
PMF1-205ENST00000497069 MBIPQ9NS73 344 aa20.58■□□□□ 0.89
PMF1-205ENST00000497069 GOLGA2Q08379 1002 aa20.57■□□□□ 0.88
PMF1-205ENST00000497069 MYH16Q9H6N6 1097 aa20.57■□□□□ 0.88
PMF1-205ENST00000497069 RREB1Q92766 1687 aa20.57■□□□□ 0.88
PMF1-205ENST00000497069 KDM3BQ7LBC6 1761 aa20.57■□□□□ 0.88
PMF1-205ENST00000497069 ZNF521Q96K83 1311 aa20.56■□□□□ 0.88
PMF1-205ENST00000497069 SNRPA1P09661 255 aaKnown RBP20.56■□□□□ 0.88
PMF1-205ENST00000497069 ITPK1Q13572 414 aa20.56■□□□□ 0.88
PMF1-205ENST00000497069 STK32BQ9NY57 414 aa20.56■□□□□ 0.88
PMF1-205ENST00000497069 UBR2Q8IWV8 1755 aa20.56■□□□□ 0.88
PMF1-205ENST00000497069 STARD3NLO95772 234 aa20.55■□□□□ 0.88
PMF1-205ENST00000497069 DNAJC10Q8IXB1 793 aa20.55■□□□□ 0.88
PMF1-205ENST00000497069 LINC00116Q8NCU8 138 aa20.54■□□□□ 0.88
PMF1-205ENST00000497069 TSR2Q969E8 191 aaKnown RBP20.54■□□□□ 0.88
PMF1-205ENST00000497069 AK7Q96M32 723 aa20.54■□□□□ 0.88
PMF1-205ENST00000497069 ZNF831Q5JPB2 1677 aa20.54■□□□□ 0.88
PMF1-205ENST00000497069 NUP188Q5SRE5 1749 aa20.53■□□□□ 0.88
PMF1-205ENST00000497069 E9PSI1 815 aa20.53■□□□□ 0.88
PMF1-205ENST00000497069 C5P01031 1676 aa20.52■□□□□ 0.88
PMF1-205ENST00000497069 GIGYF1O75420 1035 aaPredicted RBP20.52■□□□□ 0.88
PMF1-205ENST00000497069 FANCIQ9NVI1 1328 aa20.52■□□□□ 0.87
PMF1-205ENST00000497069 CYP19A1P11511 503 aaPredicted RBP20.51■□□□□ 0.87
PMF1-205ENST00000497069 SLC15A2Q16348 729 aa20.51■□□□□ 0.87
PMF1-205ENST00000497069 TFCP2L1Q9NZI6 479 aa20.51■□□□□ 0.87
PMF1-205ENST00000497069 ZBED9Q6R2W3 1325 aa20.51■□□□□ 0.87
PMF1-205ENST00000497069 CRKLP46109 303 aaKnown RBP20.5■□□□□ 0.87
PMF1-205ENST00000497069 RC3H1Q5TC82 1133 aaKnown RBP20.5■□□□□ 0.87
PMF1-205ENST00000497069 AKT1S1Q96B36 256 aa20.5■□□□□ 0.87
PMF1-205ENST00000497069 ANO8Q9HCE9 1232 aaPredicted RBP20.5■□□□□ 0.87
PMF1-205ENST00000497069 SPINK5Q9NQ38 1064 aaPredicted RBP20.5■□□□□ 0.87
PMF1-205ENST00000497069 USP16Q9Y5T5 823 aa20.5■□□□□ 0.87
PMF1-205ENST00000497069 CNTNAP4Q9C0A0 1308 aa20.5■□□□□ 0.87
PMF1-205ENST00000497069 TJP1Q07157 1748 aa20.5■□□□□ 0.87
PMF1-205ENST00000497069 CICQ96RK0 1608 aaPredicted RBP20.49■□□□□ 0.87
PMF1-205ENST00000497069 PRAMEF22A3QJZ6 481 aa20.49■□□□□ 0.87
PMF1-205ENST00000497069 SLFN5Q08AF3 891 aa20.49■□□□□ 0.87
PMF1-205ENST00000497069 ZNF827Q17R98 1081 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms