RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 ATG3Q9NT62 314 aa12.15□□□□□ -0.46
SORT1-208ENST00000495777 IGSF1Q8N6C5 1336 aa12.14□□□□□ -0.47
SORT1-208ENST00000495777 GNPATO15228 680 aa12.13□□□□□ -0.47
SORT1-208ENST00000495777 ATP6V1AP38606 617 aa12.13□□□□□ -0.47
SORT1-208ENST00000495777 ERVV-2B6SEH9 535 aa12.12□□□□□ -0.47
SORT1-208ENST00000495777 SLC4A9Q96Q91 983 aa12.12□□□□□ -0.47
SORT1-208ENST00000495777 GPBP1L1Q9HC44 474 aaPredicted RBP12.12□□□□□ -0.47
SORT1-208ENST00000495777 CICQ96RK0 1608 aaPredicted RBP12.11□□□□□ -0.47
SORT1-208ENST00000495777 RC3H1Q5TC82 1133 aaKnown RBP12.11□□□□□ -0.47
SORT1-208ENST00000495777 DCAF5Q96JK2 942 aa12.11□□□□□ -0.47
SORT1-208ENST00000495777 ZNF831Q5JPB2 1677 aa12.1□□□□□ -0.47
SORT1-208ENST00000495777 PXDNLA1KZ92 1463 aa12.1□□□□□ -0.47
SORT1-208ENST00000495777 HSP90AB1P08238 724 aaKnown RBP12.1□□□□□ -0.47
SORT1-208ENST00000495777 MMP10P09238 476 aa12.1□□□□□ -0.47
SORT1-208ENST00000495777 ADRA2BP18089 450 aa12.1□□□□□ -0.47
SORT1-208ENST00000495777 KDM6AO15550 1401 aaPredicted RBP12.1□□□□□ -0.47
SORT1-208ENST00000495777 C10orf71Q711Q0 1435 aa12.1□□□□□ -0.47
SORT1-208ENST00000495777 CNTNAP4Q9C0A0 1308 aa12.1□□□□□ -0.47
SORT1-208ENST00000495777 TNNT2P45379 298 aaPredicted RBP12.09□□□□□ -0.47
SORT1-208ENST00000495777 TGFB2P61812 414 aa12.09□□□□□ -0.47
SORT1-208ENST00000495777 RTCBQ9Y3I0 505 aaKnown RBP12.09□□□□□ -0.47
SORT1-208ENST00000495777 AMOTQ4VCS5 1084 aa12.08□□□□□ -0.48
SORT1-208ENST00000495777 PLEKHO1Q53GL0 409 aaPredicted RBP12.08□□□□□ -0.48
SORT1-208ENST00000495777 TRAPPC3LQ5T215 181 aa12.08□□□□□ -0.48
SORT1-208ENST00000495777 NLGN1Q8N2Q7 840 aa12.08□□□□□ -0.48
SORT1-208ENST00000495777 WWC3Q9ULE0 1092 aa12.08□□□□□ -0.48
SORT1-208ENST00000495777 KIF3CO14782 793 aa12.07□□□□□ -0.48
SORT1-208ENST00000495777 RPS6KA4O75676 772 aa12.07□□□□□ -0.48
SORT1-208ENST00000495777 GYS1P13807 737 aa12.07□□□□□ -0.48
SORT1-208ENST00000495777 HSPA6P17066 643 aa12.07□□□□□ -0.48
SORT1-208ENST00000495777 ZNF526Q8TF50 670 aaPredicted RBP12.07□□□□□ -0.48
SORT1-208ENST00000495777 ARHGEF1Q92888 912 aaKnown RBP12.07□□□□□ -0.48
SORT1-208ENST00000495777 PANK3Q9H999 370 aa12.07□□□□□ -0.48
SORT1-208ENST00000495777 KIAA1551Q9HCM1 1747 aa12.07□□□□□ -0.48
SORT1-208ENST00000495777 KIF13BQ9NQT8 1826 aa12.07□□□□□ -0.48
SORT1-208ENST00000495777 EIF4G2P78344 907 aaKnown RBP eCLIP12.06□□□□□ -0.48
SORT1-208ENST00000495777 ZNF530Q6P9A1 599 aaPredicted RBP12.06□□□□□ -0.48
SORT1-208ENST00000495777 RBM42Q9BTD8 480 aaKnown RBP12.06□□□□□ -0.48
SORT1-208ENST00000495777 HSPA5P11021 654 aaKnown RBP12.05□□□□□ -0.48
SORT1-208ENST00000495777 CABP4P57796 275 aa12.05□□□□□ -0.48
SORT1-208ENST00000495777 AEBP1Q8IUX7 1158 aa12.05□□□□□ -0.48
SORT1-208ENST00000495777 POLR3GLQ9BT43 218 aa12.05□□□□□ -0.48
SORT1-208ENST00000495777 COL5A3P25940 1745 aaPredicted RBP12.05□□□□□ -0.48
SORT1-208ENST00000495777 A0A0G2JLW4 131 aa12.04□□□□□ -0.48
SORT1-208ENST00000495777 RFC4P35249 363 aa12.04□□□□□ -0.48
SORT1-208ENST00000495777 IFFO2Q5TF58 517 aa12.04□□□□□ -0.48
SORT1-208ENST00000495777 CCDC87Q9NVE4 849 aa12.04□□□□□ -0.48
SORT1-208ENST00000495777 C4AP0C0L4 1744 aa12.03□□□□□ -0.48
SORT1-208ENST00000495777 DPEP1P16444 411 aa12.03□□□□□ -0.48
SORT1-208ENST00000495777 KCNA3P22001 575 aa12.03□□□□□ -0.48
SORT1-208ENST00000495777 MTHFSP49914 203 aa12.03□□□□□ -0.48
SORT1-208ENST00000495777 C1orf141Q5JVX7 400 aa12.03□□□□□ -0.48
SORT1-208ENST00000495777 BCS1LQ9Y276 419 aa12.03□□□□□ -0.48
SORT1-208ENST00000495777 PTCD1O75127 700 aaKnown RBP12.02□□□□□ -0.49
SORT1-208ENST00000495777 IL13P35225 146 aa12.02□□□□□ -0.49
SORT1-208ENST00000495777 CRKLP46109 303 aaKnown RBP12.02□□□□□ -0.49
SORT1-208ENST00000495777 MORC1Q86VD1 984 aa12.02□□□□□ -0.49
SORT1-208ENST00000495777 NFATC2IPQ8NCF5 419 aa12.02□□□□□ -0.49
SORT1-208ENST00000495777 PARP3Q9Y6F1 533 aa12.02□□□□□ -0.49
SORT1-208ENST00000495777 USP42Q9H9J4 1324 aaKnown RBP12.02□□□□□ -0.49
SORT1-208ENST00000495777 SULT6B1Q6IMI4 303 aa12.01□□□□□ -0.49
SORT1-208ENST00000495777 TOMM70O94826 608 aa12□□□□□ -0.49
SORT1-208ENST00000495777 FCHSD2O94868 740 aa12□□□□□ -0.49
SORT1-208ENST00000495777 DDR1Q08345 913 aa12□□□□□ -0.49
SORT1-208ENST00000495777 FKBP8Q14318 412 aa12□□□□□ -0.49
SORT1-208ENST00000495777 AMER1Q5JTC6 1135 aaPredicted RBP12□□□□□ -0.49
SORT1-208ENST00000495777 INTS5Q6P9B9 1019 aaKnown RBP12□□□□□ -0.49
SORT1-208ENST00000495777 SRP68Q9UHB9 627 aaKnown RBP12□□□□□ -0.49
SORT1-208ENST00000495777 MRC1P22897 1456 aa12□□□□□ -0.49
SORT1-208ENST00000495777 MYH14Q7Z406 1995 aaKnown RBP11.99□□□□□ -0.49
SORT1-208ENST00000495777 AKAP4Q5JQC9 854 aa11.99□□□□□ -0.49
SORT1-208ENST00000495777 ARHGAP27Q6ZUM4 889 aa11.99□□□□□ -0.49
SORT1-208ENST00000495777 KNSTRNQ9Y448 316 aa11.99□□□□□ -0.49
SORT1-208ENST00000495777 TJP1Q07157 1748 aa11.99□□□□□ -0.49
SORT1-208ENST00000495777 N4BP2Q86UW6 1770 aaPredicted RBP11.99□□□□□ -0.49
SORT1-208ENST00000495777 ADAMTS7Q9UKP4 1686 aa11.98□□□□□ -0.49
SORT1-208ENST00000495777 TM4SF1P30408 202 aa11.98□□□□□ -0.49
SORT1-208ENST00000495777 APLP1P51693 650 aa11.98□□□□□ -0.49
SORT1-208ENST00000495777 SLC52A2Q9HAB3 445 aa11.98□□□□□ -0.49
SORT1-208ENST00000495777 PIM2Q9P1W9 311 aa11.98□□□□□ -0.49
SORT1-208ENST00000495777 BRCA1P38398 1863 aaKnown RBP11.97□□□□□ -0.49
SORT1-208ENST00000495777 SOS1Q07889 1333 aaPredicted RBP11.97□□□□□ -0.49
SORT1-208ENST00000495777 POLRMTO00411 1230 aaKnown RBP11.97□□□□□ -0.49
SORT1-208ENST00000495777 C9orf131Q5VYM1 1079 aa11.97□□□□□ -0.49
SORT1-208ENST00000495777 NMRK2Q9NPI5 230 aa11.97□□□□□ -0.49
SORT1-208ENST00000495777 CYP19A1P11511 503 aaPredicted RBP11.96□□□□□ -0.49
SORT1-208ENST00000495777 DALRD3Q5D0E6 543 aaKnown RBP11.96□□□□□ -0.49
SORT1-208ENST00000495777 DNAJC10Q8IXB1 793 aa11.96□□□□□ -0.49
SORT1-208ENST00000495777 DNAJC5GQ8N7S2 189 aa11.96□□□□□ -0.49
SORT1-208ENST00000495777 LGR6Q9HBX8 967 aa11.96□□□□□ -0.49
SORT1-208ENST00000495777 KCPQ6ZWJ8 1503 aa11.96□□□□□ -0.5
SORT1-208ENST00000495777 RNMTO43148 476 aaKnown RBP11.95□□□□□ -0.5
SORT1-208ENST00000495777 CHRNA5P30532 468 aa11.95□□□□□ -0.5
SORT1-208ENST00000495777 RBM46Q8TBY0 533 aaKnown RBP11.95□□□□□ -0.5
SORT1-208ENST00000495777 SCN11AQ9UI33 1791 aa11.95□□□□□ -0.5
SORT1-208ENST00000495777 PER1O15534 1290 aaPredicted RBP11.94□□□□□ -0.5
SORT1-208ENST00000495777 ZPR1O75312 459 aa11.94□□□□□ -0.5
SORT1-208ENST00000495777 USPL1Q5W0Q7 1092 aa11.94□□□□□ -0.5
SORT1-208ENST00000495777 VSIG10Q8N0Z9 540 aa11.94□□□□□ -0.5
SORT1-208ENST00000495777 NARFQ9UHQ1 456 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms