RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 NASPP49321 788 aaPredicted RBP15.97■□□□□ 0.15
PTPN7-217ENST00000495688 FLIIQ13045 1269 aa15.97■□□□□ 0.15
PTPN7-217ENST00000495688 OSBPL3Q9H4L5 887 aa15.97■□□□□ 0.15
PTPN7-217ENST00000495688 FLT4P35916 1363 aa15.96■□□□□ 0.15
PTPN7-217ENST00000495688 NEK4P51957 841 aa15.96■□□□□ 0.15
PTPN7-217ENST00000495688 STK31Q9BXU1 1019 aa15.96■□□□□ 0.15
PTPN7-217ENST00000495688 AMOTL2Q9Y2J4 779 aa15.96■□□□□ 0.15
PTPN7-217ENST00000495688 PRPF40AO75400 957 aaKnown RBP15.96■□□□□ 0.15
PTPN7-217ENST00000495688 KDRP35968 1356 aa15.96■□□□□ 0.14
PTPN7-217ENST00000495688 NOL8Q76FK4 1167 aaKnown RBP15.95■□□□□ 0.14
PTPN7-217ENST00000495688 PALD1Q9ULE6 856 aa15.95■□□□□ 0.14
PTPN7-217ENST00000495688 SBNO1A3KN83 1393 aa15.95■□□□□ 0.14
PTPN7-217ENST00000495688 RBM27Q9P2N5 1060 aaKnown RBP15.95■□□□□ 0.14
PTPN7-217ENST00000495688 IGSF1Q8N6C5 1336 aa15.95■□□□□ 0.14
PTPN7-217ENST00000495688 SALL3Q9BXA9 1300 aa15.95■□□□□ 0.14
PTPN7-217ENST00000495688 ZSCAN23Q3MJ62 389 aa15.94■□□□□ 0.14
PTPN7-217ENST00000495688 RILPL2Q969X0 211 aa15.94■□□□□ 0.14
PTPN7-217ENST00000495688 LRRCC1Q9C099 1032 aa15.94■□□□□ 0.14
PTPN7-217ENST00000495688 FMN2Q9NZ56 1722 aa15.94■□□□□ 0.14
PTPN7-217ENST00000495688 RGPD8O14715 1765 aaPredicted RBP15.94■□□□□ 0.14
PTPN7-217ENST00000495688 UNC5CLQ8IV45 518 aa15.94■□□□□ 0.14
PTPN7-217ENST00000495688 GPT2Q8TD30 523 aa15.94■□□□□ 0.14
PTPN7-217ENST00000495688 LTV1Q96GA3 475 aaPredicted RBP15.94■□□□□ 0.14
PTPN7-217ENST00000495688 CWC22Q9HCG8 908 aaKnown RBP15.94■□□□□ 0.14
PTPN7-217ENST00000495688 PLEKHG1Q9ULL1 1385 aa15.94■□□□□ 0.14
PTPN7-217ENST00000495688 MX1P20591 662 aa15.93■□□□□ 0.14
PTPN7-217ENST00000495688 NLRP6P59044 892 aa15.93■□□□□ 0.14
PTPN7-217ENST00000495688 TMX3Q96JJ7 454 aa15.93■□□□□ 0.14
PTPN7-217ENST00000495688 ESYT1Q9BSJ8 1104 aa15.93■□□□□ 0.14
PTPN7-217ENST00000495688 LRRFIP2Q9Y608 721 aaKnown RBP15.93■□□□□ 0.14
PTPN7-217ENST00000495688 TRIM6-TRIM34B2RNG4 842 aa15.93■□□□□ 0.14
PTPN7-217ENST00000495688 IL17REQ8NFR9 667 aa15.92■□□□□ 0.14
PTPN7-217ENST00000495688 NSFL1CQ9UNZ2 370 aaKnown RBP15.92■□□□□ 0.14
PTPN7-217ENST00000495688 IBTKQ9P2D0 1353 aaPredicted RBP15.92■□□□□ 0.14
PTPN7-217ENST00000495688 TTC21AQ8NDW8 1320 aa15.92■□□□□ 0.14
PTPN7-217ENST00000495688 IL1RAPL2Q9NP60 686 aa15.92■□□□□ 0.14
PTPN7-217ENST00000495688 ANO2Q9NQ90 1003 aa15.92■□□□□ 0.14
PTPN7-217ENST00000495688 GNAT3A8MTJ3 354 aa15.91■□□□□ 0.14
PTPN7-217ENST00000495688 CCDC30Q5VVM6 783 aa15.91■□□□□ 0.14
PTPN7-217ENST00000495688 IL25Q9H293 177 aa15.91■□□□□ 0.14
PTPN7-217ENST00000495688 ZNF445P59923 1031 aa15.91■□□□□ 0.14
PTPN7-217ENST00000495688 ATP8B2P98198 1209 aa15.91■□□□□ 0.14
PTPN7-217ENST00000495688 USHBP1Q8N6Y0 703 aa15.91■□□□□ 0.14
PTPN7-217ENST00000495688 CHMLP26374 656 aa15.91■□□□□ 0.14
PTPN7-217ENST00000495688 PRIM1P49642 420 aaKnown RBP15.91■□□□□ 0.14
PTPN7-217ENST00000495688 RBSNQ9H1K0 784 aa15.91■□□□□ 0.14
PTPN7-217ENST00000495688 GNAI3P08754 354 aa15.9■□□□□ 0.14
PTPN7-217ENST00000495688 CCDC173Q0VFZ6 552 aa15.9■□□□□ 0.14
PTPN7-217ENST00000495688 PPP1R9BQ96SB3 815 aa15.9■□□□□ 0.14
PTPN7-217ENST00000495688 UPF3BQ9BZI7 483 aaKnown RBP15.9■□□□□ 0.14
PTPN7-217ENST00000495688 USP44Q9H0E7 712 aa15.9■□□□□ 0.14
PTPN7-217ENST00000495688 PHAXQ9H814 394 aaKnown RBP15.9■□□□□ 0.14
PTPN7-217ENST00000495688 HOXC9P31274 260 aa15.89■□□□□ 0.13
PTPN7-217ENST00000495688 PIK3C2AO00443 1686 aa15.89■□□□□ 0.13
PTPN7-217ENST00000495688 MAP4K4O95819 1239 aaPredicted RBP15.89■□□□□ 0.13
PTPN7-217ENST00000495688 NUTM1Q86Y26 1132 aa15.89■□□□□ 0.13
PTPN7-217ENST00000495688 TMEM63CQ9P1W3 806 aa15.89■□□□□ 0.13
PTPN7-217ENST00000495688 FOXD4L6Q3SYB3 417 aaPredicted RBP15.88■□□□□ 0.13
PTPN7-217ENST00000495688 FOXD4L3Q6VB84 417 aaPredicted RBP15.88■□□□□ 0.13
PTPN7-217ENST00000495688 EID1Q9Y6B2 187 aa15.88■□□□□ 0.13
PTPN7-217ENST00000495688 TUBGCP6Q96RT7 1819 aa15.88■□□□□ 0.13
PTPN7-217ENST00000495688 XRN1Q8IZH2 1706 aaKnown RBP15.88■□□□□ 0.13
PTPN7-217ENST00000495688 FAM208AQ9UK61 1670 aaKnown RBP15.87■□□□□ 0.13
PTPN7-217ENST00000495688 ANP32BQ92688 251 aaKnown RBP15.87■□□□□ 0.13
PTPN7-217ENST00000495688 UBTFL1P0CB47 393 aaPredicted RBP15.86■□□□□ 0.13
PTPN7-217ENST00000495688 TAF7Q15545 349 aaPredicted RBP15.86■□□□□ 0.13
PTPN7-217ENST00000495688 DIP2AQ14689 1571 aa15.86■□□□□ 0.13
PTPN7-217ENST00000495688 SYCE3A1L190 88 aa15.86■□□□□ 0.13
PTPN7-217ENST00000495688 HDGFL1Q5TGJ6 251 aa15.86■□□□□ 0.13
PTPN7-217ENST00000495688 KIF13AQ9H1H9 1805 aa15.85■□□□□ 0.13
PTPN7-217ENST00000495688 MAP3K5Q99683 1374 aa15.85■□□□□ 0.13
PTPN7-217ENST00000495688 HTATSF1O43719 755 aaKnown RBP15.85■□□□□ 0.13
PTPN7-217ENST00000495688 EIF2S2P20042 333 aaKnown RBP15.85■□□□□ 0.13
PTPN7-217ENST00000495688 ABTB2Q8N961 1025 aa15.85■□□□□ 0.13
PTPN7-217ENST00000495688 STAP2Q9UGK3 403 aa15.85■□□□□ 0.13
PTPN7-217ENST00000495688 C14orf37Q86TY3 774 aa15.85■□□□□ 0.13
PTPN7-217ENST00000495688 LRRC37A3O60309 1634 aa15.85■□□□□ 0.13
PTPN7-217ENST00000495688 PPP1R42Q7Z4L9 355 aa15.84■□□□□ 0.13
PTPN7-217ENST00000495688 NWD1Q149M9 1564 aa15.84■□□□□ 0.13
PTPN7-217ENST00000495688 SURF6O75683 361 aaKnown RBP15.84■□□□□ 0.13
PTPN7-217ENST00000495688 BRD1O95696 1058 aa15.84■□□□□ 0.13
PTPN7-217ENST00000495688 MCCP23508 829 aa15.84■□□□□ 0.13
PTPN7-217ENST00000495688 CUL4AQ13619 759 aa15.84■□□□□ 0.13
PTPN7-217ENST00000495688 SOS1Q07889 1333 aaPredicted RBP15.84■□□□□ 0.13
PTPN7-217ENST00000495688 SETD1BQ9UPS6 1966 aaKnown RBP15.83■□□□□ 0.13
PTPN7-217ENST00000495688 NBPF7P0C2Y1 421 aaPredicted RBP15.83■□□□□ 0.13
PTPN7-217ENST00000495688 ZSCAN30Q86W11 494 aa15.83■□□□□ 0.13
PTPN7-217ENST00000495688 GDPD2Q9HCC8 539 aa15.83■□□□□ 0.13
PTPN7-217ENST00000495688 ANXA1P04083 346 aa15.83■□□□□ 0.12
PTPN7-217ENST00000495688 SSH3Q8TE77 659 aa15.83■□□□□ 0.12
PTPN7-217ENST00000495688 TBX22Q9Y458 520 aa15.83■□□□□ 0.12
PTPN7-217ENST00000495688 KCNA6P17658 529 aa15.82■□□□□ 0.12
PTPN7-217ENST00000495688 RNF214Q8ND24 703 aa15.82■□□□□ 0.12
PTPN7-217ENST00000495688 LARP6Q9BRS8 491 aaKnown RBP15.82■□□□□ 0.12
PTPN7-217ENST00000495688 LGR6Q9HBX8 967 aa15.82■□□□□ 0.12
PTPN7-217ENST00000495688 KCNQ3O43525 872 aa15.81■□□□□ 0.12
PTPN7-217ENST00000495688 MCM2P49736 904 aa15.81■□□□□ 0.12
PTPN7-217ENST00000495688 ANAPC15P60006 121 aa15.81■□□□□ 0.12
PTPN7-217ENST00000495688 RBM33Q96EV2 1170 aaKnown RBP15.81■□□□□ 0.12
PTPN7-217ENST00000495688 SRCIN1Q9C0H9 1055 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms