RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 CCDC184Q52MB2 194 aa22.81■■□□□ 1.24
SNX17-209ENST00000494893 SLC4A9Q96Q91 983 aa22.81■■□□□ 1.24
SNX17-209ENST00000494893 SLC52A2Q9HAB3 445 aa22.81■■□□□ 1.24
SNX17-209ENST00000494893 STK32BQ9NY57 414 aa22.81■■□□□ 1.24
SNX17-209ENST00000494893 CASZ1Q86V15 1759 aa22.79■■□□□ 1.24
SNX17-209ENST00000494893 SRCAPQ6ZRS2 3230 aa22.79■■□□□ 1.24
SNX17-209ENST00000494893 LOC102724428A0A0B4J2F2 783 aa22.79■■□□□ 1.24
SNX17-209ENST00000494893 SIK1P57059 783 aa22.79■■□□□ 1.24
SNX17-209ENST00000494893 VIRMAQ69YN4 1812 aaKnown RBP22.79■■□□□ 1.24
SNX17-209ENST00000494893 CEMIPQ8WUJ3 1361 aa22.78■■□□□ 1.24
SNX17-209ENST00000494893 ITPK1Q13572 414 aa22.78■■□□□ 1.24
SNX17-209ENST00000494893 C5P01031 1676 aa22.77■■□□□ 1.24
SNX17-209ENST00000494893 TAF1LQ8IZX4 1826 aa22.76■■□□□ 1.23
SNX17-209ENST00000494893 LINC00116Q8NCU8 138 aa22.75■■□□□ 1.23
SNX17-209ENST00000494893 TUBGCP6Q96RT7 1819 aa22.75■■□□□ 1.23
SNX17-209ENST00000494893 SIPA1L3O60292 1781 aaPredicted RBP22.74■■□□□ 1.23
SNX17-209ENST00000494893 SLC39A6Q13433 755 aa22.74■■□□□ 1.23
SNX17-209ENST00000494893 ADAMTS8Q9UP79 889 aa22.74■■□□□ 1.23
SNX17-209ENST00000494893 KCPQ6ZWJ8 1503 aa22.73■■□□□ 1.23
SNX17-209ENST00000494893 DCTN1Q14203 1278 aa22.73■■□□□ 1.23
SNX17-209ENST00000494893 MCM10Q7L590 875 aa22.73■■□□□ 1.23
SNX17-209ENST00000494893 AMIGO3Q86WK7 504 aa22.73■■□□□ 1.23
SNX17-209ENST00000494893 RBM42Q9BTD8 480 aaKnown RBP22.73■■□□□ 1.23
SNX17-209ENST00000494893 ZNF831Q5JPB2 1677 aa22.73■■□□□ 1.23
SNX17-209ENST00000494893 PNPLA7Q6ZV29 1317 aa22.73■■□□□ 1.23
SNX17-209ENST00000494893 C4BP0C0L5 1744 aa22.73■■□□□ 1.23
SNX17-209ENST00000494893 ANP32CO43423 234 aa22.72■■□□□ 1.23
SNX17-209ENST00000494893 PTCD1O75127 700 aaKnown RBP22.72■■□□□ 1.23
SNX17-209ENST00000494893 ATP6V1AP38606 617 aa22.72■■□□□ 1.23
SNX17-209ENST00000494893 NFE2L2Q16236 605 aa22.72■■□□□ 1.23
SNX17-209ENST00000494893 LRP5O75197 1615 aa22.71■■□□□ 1.23
SNX17-209ENST00000494893 QSER1Q2KHR3 1735 aa22.71■■□□□ 1.23
SNX17-209ENST00000494893 CCDC146Q8IYE0 955 aa22.71■■□□□ 1.23
SNX17-209ENST00000494893 HTATSF1O43719 755 aaKnown RBP22.7■■□□□ 1.22
SNX17-209ENST00000494893 WDR43Q15061 677 aaKnown RBP eCLIP22.7■■□□□ 1.22
SNX17-209ENST00000494893 DLG5Q8TDM6 1919 aa22.69■■□□□ 1.22
SNX17-209ENST00000494893 TJP1Q07157 1748 aa22.69■■□□□ 1.22
SNX17-209ENST00000494893 CICQ96RK0 1608 aaPredicted RBP22.69■■□□□ 1.22
SNX17-209ENST00000494893 MAPK8IP3Q9UPT6 1336 aa22.69■■□□□ 1.22
SNX17-209ENST00000494893 TEFQ10587 303 aa22.69■■□□□ 1.22
SNX17-209ENST00000494893 SMIM5Q71RC9 77 aa22.69■■□□□ 1.22
SNX17-209ENST00000494893 PNNQ9H307 717 aaKnown RBP22.69■■□□□ 1.22
SNX17-209ENST00000494893 TFCP2L1Q9NZI6 479 aa22.69■■□□□ 1.22
SNX17-209ENST00000494893 UBR2Q8IWV8 1755 aa22.68■■□□□ 1.22
SNX17-209ENST00000494893 COL5A3P25940 1745 aaPredicted RBP22.68■■□□□ 1.22
SNX17-209ENST00000494893 ZBTB7AO95365 584 aa22.67■■□□□ 1.22
SNX17-209ENST00000494893 NEFMP07197 916 aa22.67■■□□□ 1.22
SNX17-209ENST00000494893 KCNQ3O43525 872 aa22.66■■□□□ 1.22
SNX17-209ENST00000494893 TMPOP42166 694 aaKnown RBP22.66■■□□□ 1.22
SNX17-209ENST00000494893 COL23A1Q86Y22 540 aaPredicted RBP22.66■■□□□ 1.22
SNX17-209ENST00000494893 RTF1Q92541 710 aaKnown RBP22.66■■□□□ 1.22
SNX17-209ENST00000494893 THUMPD2Q9BTF0 503 aaKnown RBP22.66■■□□□ 1.22
SNX17-209ENST00000494893 RUNDC1Q96C34 613 aa22.65■■□□□ 1.22
SNX17-209ENST00000494893 UBR3Q6ZT12 1888 aa22.64■■□□□ 1.22
SNX17-209ENST00000494893 ZNF790Q6PG37 636 aa22.64■■□□□ 1.21
SNX17-209ENST00000494893 AK7Q96M32 723 aa22.64■■□□□ 1.21
SNX17-209ENST00000494893 RRP7AQ9Y3A4 280 aaKnown RBP22.64■■□□□ 1.21
SNX17-209ENST00000494893 RIPK4P57078 832 aa22.63■■□□□ 1.21
SNX17-209ENST00000494893 DNAJC10Q8IXB1 793 aa22.63■■□□□ 1.21
SNX17-209ENST00000494893 PNISRQ8TF01 805 aaKnown RBP22.63■■□□□ 1.21
SNX17-209ENST00000494893 ZNF496Q96IT1 587 aaPredicted RBP22.63■■□□□ 1.21
SNX17-209ENST00000494893 CNTNAP4Q9C0A0 1308 aa22.62■■□□□ 1.21
SNX17-209ENST00000494893 BTBD11A6QL63 1104 aa22.62■■□□□ 1.21
SNX17-209ENST00000494893 PTGER2P43116 358 aa22.62■■□□□ 1.21
SNX17-209ENST00000494893 MIER1Q8N108 512 aa22.62■■□□□ 1.21
SNX17-209ENST00000494893 SGIP1Q9BQI5 828 aa22.62■■□□□ 1.21
SNX17-209ENST00000494893 SPON1Q9HCB6 807 aa22.62■■□□□ 1.21
SNX17-209ENST00000494893 MRS2Q9HD23 443 aa22.62■■□□□ 1.21
SNX17-209ENST00000494893 ATF5Q9Y2D1 282 aaPredicted RBP22.62■■□□□ 1.21
SNX17-209ENST00000494893 GNPATO15228 680 aa22.61■■□□□ 1.21
SNX17-209ENST00000494893 RC3H1Q5TC82 1133 aaKnown RBP22.61■■□□□ 1.21
SNX17-209ENST00000494893 MTFR1LQ9H019 292 aa22.61■■□□□ 1.21
SNX17-209ENST00000494893 MYH14Q7Z406 1995 aaKnown RBP22.6■■□□□ 1.21
SNX17-209ENST00000494893 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.6■■□□□ 1.21
SNX17-209ENST00000494893 HMGB2P26583 209 aaKnown RBP22.6■■□□□ 1.21
SNX17-209ENST00000494893 CRKLP46109 303 aaKnown RBP22.6■■□□□ 1.21
SNX17-209ENST00000494893 TTC5Q8N0Z6 440 aa22.6■■□□□ 1.21
SNX17-209ENST00000494893 TRIM35Q9UPQ4 493 aa22.6■■□□□ 1.21
SNX17-209ENST00000494893 HEG1Q9ULI3 1381 aa22.6■■□□□ 1.21
SNX17-209ENST00000494893 PHF14O94880 888 aa22.59■■□□□ 1.21
SNX17-209ENST00000494893 CYP19A1P11511 503 aaPredicted RBP22.59■■□□□ 1.21
SNX17-209ENST00000494893 TAF7Q15545 349 aaPredicted RBP22.59■■□□□ 1.21
SNX17-209ENST00000494893 INTS5Q6P9B9 1019 aaKnown RBP22.59■■□□□ 1.21
SNX17-209ENST00000494893 VSIG10Q8N0Z9 540 aa22.59■■□□□ 1.21
SNX17-209ENST00000494893 MIS18AQ9NYP9 233 aa22.59■■□□□ 1.21
SNX17-209ENST00000494893 COL24A1Q17RW2 1714 aa22.58■■□□□ 1.21
SNX17-209ENST00000494893 SSFA2P28290 1259 aa22.58■■□□□ 1.21
SNX17-209ENST00000494893 NEUROD2Q15784 382 aa22.58■■□□□ 1.21
SNX17-209ENST00000494893 SLC16A10Q8TF71 515 aa22.58■■□□□ 1.21
SNX17-209ENST00000494893 RPS6KA4O75676 772 aa22.56■■□□□ 1.2
SNX17-209ENST00000494893 FLAD1Q8NFF5 587 aa22.56■■□□□ 1.2
SNX17-209ENST00000494893 KDM3BQ7LBC6 1761 aa22.55■■□□□ 1.2
SNX17-209ENST00000494893 APAF1O14727 1248 aa22.55■■□□□ 1.2
SNX17-209ENST00000494893 MSH5O43196 834 aa22.55■■□□□ 1.2
SNX17-209ENST00000494893 FMNL2Q96PY5 1086 aa22.55■■□□□ 1.2
SNX17-209ENST00000494893 PRAMEF22A3QJZ6 481 aa22.54■■□□□ 1.2
SNX17-209ENST00000494893 CCDC87Q9NVE4 849 aa22.54■■□□□ 1.2
SNX17-209ENST00000494893 RTCBQ9Y3I0 505 aaKnown RBP22.54■■□□□ 1.2
SNX17-209ENST00000494893 MSL1Q68DK7 614 aa22.53■■□□□ 1.2
SNX17-209ENST00000494893 ZBTB1Q9Y2K1 713 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 923 ms